Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->ANAC58                                           <---------ANAC58                                           <---------ANAC58                                    --------->LBD16                                    ------>NtERF2                                   --------->RAP2.6(2)                                  <---------DEAR3(1)                                  --------->ATERF1(1)                                 ------>NtERF2 --------->ANAC58                                 <---------ATERF1(1)                                 --------->ATERF1(1)                                 <---------DREB2C(1)                                <---------SPL7--------->SPL7                    --------->ALFIN1                                --------->DEAR3(1)                            ----------->RAV1(2)                               --------->MYB46(3)                             --------->ZAT2                              <---------At4g35610                             <---------ZAT2---------                <---------ALFIN1<---------ATERF1(1)                           <---------At4g35610               --------->MYB46(3)--------->DREB2C(1)                          --------->At4g35610          <------ZmHOX2a(2)   --------->At4g35610                 ---------->DOF2 --------->ALFIN1 ------>ZmHOX2a(1)    <---------YAB1<------NtERF2             <------ZmHOX2a(1) <-----------RAV1(1)   gtcctctctgcgatcgaaccacttgtgattccagcggccgcgattgcgaacgcccattggtagaggaagaaagagtaatcagctgtgggagtcggaaagt  8807000                                              ---------->DOF2                                           ------>ZmHOX2a(1)                                     <---                                       <---------ARR11(3)                                   ---------                                       --------->ARR14(2)                                   <--------                                       <---------ARR14(3)                                   <--------                                       --------->ARR11(3)                                   <--------                                       --------->ARR14(3)                                   <------NtERF2                                      <------ZmHOX2a(1)                                  <---------At4g35610                                     ----------->ARR10          ---------->DOF2          ----------->RAV1(2)                                    <---------TOE1(2)    <---------ANAC58                --------->At4g35610                                   <---------------------WRI1 --------->MYB46(3)        <---------ATERF1(1)                           ------->TEIL<---------ARR14(2)<---------ANAC55(2)            ------>NtERF2                          <-----------GT1------>ZmHOX2a(2)  <---------ARR14(2)          --------->LBD16              <---------ANAC46 <-----------HVH21    ---------->DOF2                   <---------LBD16 ->DOF2---------->DOF2  <---------ATHB12<------ZmHOX2a(2)<---------ANAC58            ------>ZmHOX2a(1)   ctctaagagcaaagttgtgtcttccaatgaacccttcggaggatcctccaaaggcaaaggcgtaaccaaagagatagtagaagagtcctccggctgcagc  8807100                                                                                   <---------ANAC46                                                                              <---------AtLEC2      <                                                                             <-------TEIL       <----   <------ZmHOX2a(1)                                                      <---------At4g35610   <---- --------HVH21         <-------TEIL                                       --------->At4g35610  ------ >At4g35610    --------->YAB1                                             --------->ZAT2       ------ -ZAT2        --------->ICU4                                              <---------ZAT2      <------ -At4g35610  --------->ANAC58                           ---------->DOF2  <---------ARR14(2)--------->ANAC58 -ZAT14      --------->ANAC58                       --------->At4g35610  --------->ARR14(2)--------->ANAC58   gtcaaggacattggtaagcatgatgttcatcgtattcttggctctaacagaaccagcacaaagcatagcgaagccgagctgcatggcgaagacaaggtag  8807200                                                                                                    <                                                                                                   <-                                                                                                 ----                                                                                               ======                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               ======                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                              <------NtERF2                                                                                             --------                                                                                             ------>NtERF2                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           --------->ORA47(2)                                                                                           --------->RRTF1(1)                                                                                           --------->RAP2.3(1)                                                                                           --------->ERF1                                                                                           --------->RAP2.6(1)                                                                                           --------->ATERF1(1)                                                                                           <------NtERF2                                                                                           --------->DEAR4(2)                                                                                          --------->DREB2C(1)                                                                                          --------->ATERF1(1)                                                                                          <---------RAP2.3(1)                                                                                          <---------DEAR4(2)                                                                                          <---------DREB2C(1)                                                                                          <---------ATERF1(1)                                                                                          --------->At4g35610                                                                                          <---------At4g35610                                                                                          <------NtERF2                                                                                          ------>NtERF2                                                                                         --------->DEAR3(1)                                                                                         <---------DEAR3(1)                                                                                         <---------ATERF1(2)                                                                                         --------->ATERF1(2)                                                                                        --------->ATERF1(1)                                                                                        --------->RAP2.3(1)                                                                                        --------->SPL7                                                                                       --------->DREB2C(1)                                                                                       <---------DREB2C(1)                                                                                       --------->At4g35610                                                                                       <---------At4g35610                                                                                       <------NtERF2<                --------->ALFIN1                                                       <---------ATERF1(1)              <------MYB83                                                <------NtERF2--------->ATERF1(1)              <------MYB46(1)                                            --------->RAP2.6(2)---------             <---------AtMYB61                                           --------->ANAC58<---------ATERF1(1)             --------->MYB111(2)                                    <---------WOX13(1)<---------SPL7< ------NtERF2--------->MYB46(2)                         <---------DOF5.7(2)           <---------ATERF1(1) --MYB46(1)  --------->MYB111(1)                        --------->MYB52(1)--------->LBD16--------->RAP2.3(2) --MYB83    <--------P                      <---------ZAT18       --------->ATHB12   <---------DEAR3(1) --->MYB46(2)--------->MYB59                --------->ZAT14     <---------MYB59      <---------RAP2.6(2) --->MYB59  <---------MYB55(1)      <------NtERF2     --------->DOF5.7(2)--------->ANAC58--------->RAP2.6(2) --P    <------ZmHOX2a(1)   <---------ANAC46<---------ZAT14   ------>NtERF2         --------->ATERF1(1)   gcagagaagaggaggtaggtgttgtctatggcgaaggctgcatcggtgaacttgttgttaacggtgcctaattggccgcaaatgtagtcggccgccgccg  8807300   --------->ALFIN1  --------->ALFIN1 <-------GAMYB ---------ANAC58 -----NtERF2 ----->ALFIN1                    <------NtERF2 ========MYC_MYB                --------->At4g35610 --->TGA1a                     ----------->RAV1(1) ----ANAC46                    --------->RAP2.6(2) ----O2                        ===============================RAV --->O2------>NtERF2        <---------SPL7 ===========================================MYC_MYB ----TGA1a                 ================================HOX2a_HOX2a --->DEAR3(1)              ------>ZmHOX2a(2) -->ATERF1(1)             =================================HOX2a_HOX2a ->ABI4(1)                <------ZmHOX2a(2) -DEAR3(1)               --------->ARR14(2)                                                 --------- >DEAR3(1)               <---------ARR14(2)                                               <-------TEIL >RRTF1(3)             ----------->ARR10                                                  <---------LBD16 >DREB2C(2)          <---------ANAC46                               <---------At4g35610  --------->ARR14(1) >RRTF1(2)           <---------ANAC58                               --------->ZAT2       --------->CCA1(2) >RAP2.6(2)          <---------ANAC58                               --------->At4g35610 <---------ARR14(2) >ATERF1(2)         <------NtERF2<----------CDC5      <<<<<<<GRF7   <---------ZAT2      --------->ARR14(2) >RAP2.3(2)       <---------DEAR3(1)                ------>ZmHOX2a(1)                   --------->ARR11(1) ---------ANAC46  --------->ALFIN1                <---------At4g35610                  --------->CCA1(2) >RAP2.3(3)     <---------ANAC58<---------At4g35610 ----------->HVH21                 ----------->ARR10 ---------ANAC58<---------ANAC58<------NtERF2     ----------->RAV1(2)           ---------->DOF2*TSS   tggcgttggggccaagtagggtggcgagatcggccgcagagcatgttattgctcctgacatgtttgagagagctgagagagagaaagagagatacggaga  8807400                                                                --------->LBD16                                                                ------>NtERF2                                                            --------->GLK1(2)                         ---------->DOF2          --------->WRKY12         <---------ATHB12                    <---------------AGL15         --------->WRKY38(1)    --------->WOX13(1)              <---------ANAC58                  <-------GAMYB <---------LBD16              <---------ANAC46                <---------TOE1(3)<---------ANAC46   ----------------------->TaNAC69(2)  <------ZmHOX2a(1)   <---------GLK1(2)     <-------TEIL --------->DAG2     --------------->AGL15     <---------TOE2(3)<---------RAP2.6(2) >LBD16       <---------ANAC58      <------ZmHOX2a(1) <----------DOF2  ------------>CBF   agaaaggttgtctcttgtgtgtctcttaaaaggaagaaggaggagtttagggttgactttagattccggctagaccaattaagttcgtatttaagagagt  8807500                                   --------->ATHB51                                   --------->ATHB12                                  --------->ICU4                                  <---------YAB1                                 --------->TOE2(3)                        <---------ANAC46                        --------->ANAC55(2)                        <---------ANAC58                        --------->ANAC58                        <---------ANAC55(2)                        <---------ANAC58                        ----------->GT1                        --------->TGA2(1)                        --------->ANAC58                        <---------O2                        --------->O2                        <---------TGA1a                                    <---------ANAC58     -------->ATHB1     <---------bZIP60(1)                   <---------ARR11(1)                   <-     --------->ATHB51   <---------TGA2(1)                     --------->ARR14(2)         <<<<<<<<<ARR1     <--------HAHB4<---------ANAC55(2)                        <---------ARR14(2)         ============     --------->AHL20(2) <---------bZIP60(2)                   <-----------ARR10          <<<<<<<<<ARR2     <---------AHL20(2) --------->bZIP60(1)                   <---------ARR11(3)         <------ZmHOX2a(2)    <---------ATHB51   ----------->STF1                       --------->ARR11(3)      <---------YAB1    <---------ATHB12 ----------->HVH21                <---------At4g35610  <---------ANAC58       ---    --------->ICU4 --------->ANAC55(2)                --------->At4g35610--------->ARR11(3) ------>ZmHOX2a(1)  --------->WOX13(1) ----------->TGA1  <---------AHL20(2)    <---------CCA1(2)      <-----------GT1--   ttatcaattatttaagaagttatgtgacgtaacaacattattgaattagagatgtaatctgccaaatcttcttaataacttgcaaattacgatcctaatc  8807600                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                           --------->AHL20(1)                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                                                                          --------->AHL20(2)                                                           ---------->DOF2<---------AHL20(2)        <                                                          <---------AHL20(2)            <---------AHL20(1)                                    ----------->GT1       --------->AHL20(2)<---------ICU4   -------- --------ARR14(2)      <---------WOX13(1)          ----------->GT1----------->GT1       --------->AHL20(1) ====HOX2a_HOX2a     --------->ATHB12             --------->DAG2<---------ANAC58       <---------AHL20(2) --->ZmHOX2a(1)   <---------ANAC55(2)           ---------->DOF2 <---------ANAC46       --------->AHL20(2) ------->ARR14(2) --------->ANAC55(2)      --------->AHL20(2)   <---------ANAC58     --------->YAB1 -   ctatacggtttttggtgattaagtgattgccatgtaatgtgtgaataaaaaaaaggtaaattaaaggcttgtataaaaaaattacaaaaataaatttgtg  8807700                                       --------->ATHB51                                       --------->YAB1                                       <---------ICU4                                ---------->DOF2                            --------->WOX13(1)                      --------->ANAC58                           --------->AHL20(2)                       --------->ANAC46                           <---------AHL20(2)  ------>ZmHOX2a(1)    --------->AtLEC2 <---------AHL20(2)  ----------->GT1   <--------ATHB1               --------->ANAC58 ---------AHL20(2)  <---------TOE2(3) --------->ICU4       <---------ARR14(2)  --------->YAB1 --->GT1           ---------->DOF2    <---------YAB1       --------->ARR14(2) <------ZmHOX2a(2) -------->AHL20(2)<---------AHL20(2)--------->YAB1      ------->GAMYB   --------->MYB52(1)   aataaaattgatactagtatttaaagtaataaatcaaagaataattgtcctagctcaaccgtatatgttcaagcaaaccgatcagaacttactacataga  8807800                                                            <<<<<<<<<ARR2                                                            <<<<<<<<<ARR1                                                      --------->ANAC46               --------->YAB1                                                <----------DOF2           --------->AtLEC2   <-------TEIL                                           <---------ALFIN1--------->GLK1(2)        <---------YAB1                                          <---------At4g35610     --------->YAB1   --------->AHL20(2)             --------->At4g35610          --------->At4g35610    <---------YAB1    <---------AHL20(2)             <---------At4g35610       <-------TEIL   --------->ANAC58--------->GLK1(2)  --------->DAG2          <------ZmHOX2a(2)        --------->ICU4     --------->ANAC58--------->ARR11(3)---------->DOF2   tgtcgattttagatcagcagttttatgaaattaagtcaagattcagcactctttatacgacaatcttatgataatcttgcaaaattttaataaagttcat  8807900  Previous    Next  AGI:  At3g24300.1    Description:  AMT1;3/ATAMT1;3 (AMMONIUM TRANSPORTER 1;3); ammonium transmembrane transporter. Identical to Ammonium transporter 1 member 3 (AMT1.3) [Arabidopsis Thaliana] (GB:Q9SQH9;GB:Q0WSW8;GB:Q9LK15); similar to AMT1,1 (AMMONIUM TRANSPORT 1), ammonium transmembrane transporter [Arabidopsis thaliana] (TAIR:AT4G13510.1); similar to ammonium transporter, putative [Arabidopsis thaliana] (TAIR:AT3G24290.1); similar to ammonium transporter, putative [Arabidopsis thaliana] (TAIR:AT4G28700.1); similar to ammonium transporter [Citrus sinensis x Poncirus trifoliata] (GB:ABI52423.2); similar to high-affinity ammonium transporter AMT1;2 [Brassica napus] (GB:AAG287 Range:  from: 8805638    to: 8807395    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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