Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ------->GAMYB   ---------->DOF2   <---------DOF5.7(2) --------->DOF5.7(2)                              <---------AHL20(2)                           ------ -------->TOE1(3)                                 --------->AHL20(2)                           ------ -------->TOE2(3)        --------->ATHB12     <---------AHL20(2)                     <---------TOE2(3) -------TOE2(3)     ---------->DOF2           --------->AHL20(2)      <---------AHL20(2)       ------ -ZAT6    --------->MYB46(3)            ------->TEIL                 --------->AHL20(2)    <---------   aacgttaaagtcacaaccgtattaaagtgatttgtttcaacgtatcaaaaaattaaaaatcgtttcatacatttaatcgctaaatttaagttttaacaag  8786300                                                                     --------->AHL20(1)                                                                     --------->AHL20(2)                                                                     <---------AHL20(2)                                                                    --------->AHL20(2)                                                               <---------AHL20(2)                                                         --------->YAB1 --->ANAC58                                        <---------At4g35610 --->ANAC46                                        --------->At4g35610 --->ANAC58                                --------->ATHB12    --------->AHL20(2) --------->MYB46(3) --GT1                                --------->ARR11(3)<---------YAB1<---------ICU4               --   caatagtagaagacttcaaaatgtaacagcgaaatgcagacatcttgatttgcagcttatcatattaaaaaaaaattacatcgaaccactatatcacatt  8786400                                          --------->ANAC58                                       --------->ARR14(2)                                       <---------ARR14(2)                                      <----------TaMYB80                                      <---------GLK1(1)                      <---------ARR11(3)  --------->ANAC46                --------->YAB1        --------->GLK1(1)          --------->ZAT6              --------->CCA1(2)         --------->ZAT18             <---------ARR14(2)                           <---------ANAC58         <---------ZAT18            <------ZmHOX2a(1)                             <---------ANAC58     <----------DOF2  --------->ARR11(3)  --------->ANAC58                   <---------------AGL15     <---------DAG2--------->AHL20(2)--------->ARR14(2)                  --------->ZAT14 ------->ZAT6   <------ZmHOX2a(1) <---------TOE2(3)   <---------AHL20(2) <---------ZAT14   gactctacttttgcactaggataaaatctaaaattttaggatatacgaaatacgaattaatgctcgtttcaatagtttactaattcttgtgaatacatct  8786500              --------->ZAT2              <---------HSFC1(2)              <---------HSFB2a(1)              --------->At4g35610              <---------At4g35610                                        <---------ICU4              --------->HSFB2a(1)                                       --------->ICU4              --------->HSFC1(2)                                      --------->YAB1--------->ANAC46              <---------ZAT2                                --------->YAB1          --------->ANAC58             ------->TEIL                                 <-----------HVH21         --------->ANAC58       --------->TOE1(2)                              <------ZmHOX2a(1) <---------YAB1          <----      --------->At4g35610                            --------->ZAT18 <---------ATHB12        --------   atctaagtagctacgaagctccctatacataaaaccattacatttcccatagaagaggactgtcatgaccaatgataattgtgaacaagtcattaacact  8786600                                   ----------------------->TaNAC69(2)                                --------->ARR11(3)                                <---------ARR11(3)                               --------->YAB1                           <---------AHL20(2)                                       <<<<<<<<<<FUS3                           --------->AHL20(1)                                       >>>>>>>>>>FUS3        --------->AHL20(2) <---------AHL20(1)                     <---------AHL20(2)<<<<<<<<<<ABI3      <----------DOF2      --------->AHL20(2)                   ----------->TBP    --------->AtLEC2 ------DOF2           ------------>CBF                <----------DOF2      --------->ZAT14      *TSS ->ZAT6 <---------AHL20(2)<---------ATHB12        <---------CCA1(2)      --------->ANAC46     <------   ttcttcacctttaattaagtcttatccaattaattatcttcaactgtaatccgtctctttccttctatataatccactacattccatgcatgcatgcttt  8786700                                                --------->ANAC58                                                --------->ANAC46                                                --------->ANAC58               <-----------ARR10       --------->YAB1                          --------->TOE1(2)            <---------TOE2(3) ----DOF2                           <---------GLK1(1)                     <---------ATHB12   caaatccaaacataacatctcaacattgaactcgtttgaaatctctaaacaagcgatagagctaaacaaaatggcaatgaggttctcatcacttactaaa  8786800                                                                                                   --                                     <------------OsbHLH66                                         --                                   --------->AtLEC2                                               ---                                   --------->ANAC58                                          <-------                                   --------->ANAC58                                          --------                                 <---------ALFIN1                                         --------->At4g35610                                <---------WRKY12                                          --------->ZAT2                                <---------WRKY45  <---------DAG2                          <---------ZAT2                         <----------DOF2     --------->ANAC58                             <---------At4g35610                        <---------ANAC58     --------->ANAC58                            <---------ARR14(2)                        <---------ANAC46------->PIF5                                     --------->ARR14(2)               <---------At4g35610 --------->ANAC46--------->ZAT14                       <-----------ARR10               --------->At4g35610<---------LBD16 <----------DOF2                       <------ZmHOX2a(1)            <---------At4g35610 <---------WRKY38(1)<---------ZAT14                    --------->ALFIN1   <---------ANAC58     <---------ANAC58<-------PIF5    <---------At4g35610        --------->ALFIN1--   <---------ANAC58<-----------RAV1(1)------------>OsbHLH66            ------>NtERF2 <------ZmHOX2a(1)   atcgtgcttctctctgcagctatgttgcttttggtccacgcaagtgctcgcactttacagcaaactcagactctgcctctccaaggaggaggagctgctc  8786900                                                                                              >>>>>>>                                                                                              >>>>>>>                                                                                         <---------MYB46(3)                                                                                         <------MYB46(1)                                                                                         <------MYB83                                                               <------NtERF2            <---------MYB46(3)                                                               <-------GAMYB            --------->MYB55(2)                                                              <---------DEAR3(2)        --------->MYB111(2)                                                              <---------MYB46(3)        --------->MYB111(1)                                                             <---------DREB2C(2)        <---------AtMYB61                                                             <---------DEAR3(1)        <--------P                                                             --------->ALFIN1       <------NtERF2                                                          <---------DEAR3(1)       --------->LBD16  ---------->DOF2                                         --------->ANAC46       <---------LBD16 ---- ---->MYB46(1)                                 --------->ARR14(2)           <-----------RAV1(1) <---- ------>P ------->TEIL                         <---------ARR11(3)           --------->ALFIN1  >>>>>>> --->ZmHOX2a(1)               <---------ALFIN1 --------->ARR11(3)          <------NtERF2--------->ALFIN1 --At4g35610       ----------->GT1             <---------ARR14(2)        <---------DREB2C(2)  >>>>>>> ->At4g35610--------------->AGL15        <-----------RAV1(2)<---------ABI4(1)    ----------------->AGL1 ---->MYB83<-----------------AG       <------ZmHOX2a(1)  <---------LBD16 <---------DEAR3(1)   <------   ctaccaaagatgagcctcatatggttaatgcccctcttgaggaccagaagaacttcatctacggcggtggaattggcggtgttgccggagttggtggatt  8787000                                                                                                    <                                                                                        <------MYB46(1)                                                                                       <---------AtMYB61                                                               ------>NtERF2   <---------ZAT2       <                                                               <---------At4g35610    <----------DOF2                                                             <------NtERF2    <---------AtMYB61    <-                                                             --------->RAP2.3(1)     <---------ANAC58                                                            <---------RAP2.3(1)<------MYB46(1)     <-                     <---------AtMYB61                      ------>NtERF2     --------->ALFIN1     --                     --------->ALFIN1                      <---------DEAR3(1) --------->MYB55(2) <---            <---------DEAR3(1)                             --------->ANAC58   <---------MYB46(3) <---            <---------AtMYB61                              --------->ANAC58<---------PCF2       <---- >>GATA-1 --------->O2                                    --------->SPL7   --------->TCP20 --------->MYB55(2) >>GATA-4 <---------ZAT2  <------NtERF2<----------DOF2   <---------PCF2   <------NtERF2--------->ALFIN1 ----->ATHB12<---------MYB46(3)  <---------ANAC58        <---------ATERF1(1) <---------ANAC46<------- ---TEIL<-----------RAV1(2)      <---------AtLEC2     --------->ALFIN1  --------->ALFIN1<------MYB83< >>GATA-3 --------->ZAT2 <---------MYB46(3)   <---------ALFIN1--------->DEAR3(1)     <---------ANAC58 >>GATA-2 <---------O2<---------MYB46(3)    <---------ALFIN1<---------ATERF1(1)<------MYB83<---------MYB46(3) ---ARR14(2)--------->ALFIN1     <---------ANAC58 --------->LBD16<----------DOF2  <---------ZAT18<---   catggggatgccaggtggtggaagtggtggctctggcatgactttcccactcccgagtgggacgccgcttcttggtggggctggtgggcttggtggtttg  8787100                                                                                                    <                                                                                                  ---                                                                                                 ----                                                                                                 <---                                            <---------AtMYB61                                   <----           <---------GLK1(1)                --------->ALFIN1                                 --------          <---------ANAC58                <---------MYB46(3)                                 <-------   --------->ZAT18                       <-----------RAV1(1)                               <---------ICU4 ------MYB83                             <---------ZAT6                                    --------->YAB1 ---------MYB46(3)                 ------->TEIL                                           --------->ICU4 --------DEAR3(1)             --------->MYB55(2)                                          <---------YAB1 --------AtMYB61              <---------MYB46(3)                             ------>ZmHOX2a(1)------- ------->ALFIN1              --------->ALFIN1<---------MYB46(3)      --------->ABI4(2)  --------->YAB1 ------ANAC46                <---------AtMYB61 --------->ALFIN1      --------->MYB55(2)============== ------ANAC58                <---------DEAR3(1)<---------AtMYB61     <---------MYB46(3)<------ZmHOX2a(2) -----MYB46(3)       --------->ZAT18     <---------AtMYB61          <---------DEAR3(1)--------->ARR11(3) --ANAC46 <---------ANAC58<---------DEAR3(1)<---------DEAR3(1)      --------->ALFIN1  <---------ARR11(3) ------MYB46(1)      <---------ZAT18     --------->ALFIN1           <---------AtMYB61<---------At4g35610 ------ANAC58  <---------ANAC46   <---------TCP16(2)         ---------->DOF2 =================HOX2a_HOX2a   ggtggtgcaatggggttccctggtggactcggtggtggacctagtggtggtggtgttccaagttcaagcggtggttctccttaagacagatcatgatgat  8787200  Previous    Next  AGI:  At3g24250.1    Description:  glycine-rich protein Range:  from: 8786696    to: 8787398    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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