Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <---------ICU4            --------->AHL20(2)            <---------AHL20(2)            <---------AHL20(1)            <---------ICU4            --------->YAB1            <--------ATHB1                                                      <-----------GT1           --------->ICU4                                                   <---------RVE1(1)         --------->YAB1                                                     <---------CCA1(1)        <---------AHL20(2)<---------GLK1(1)                                --------->ARR11(3)       --------->AHL20(2) --------->GLK1(1)                                <---------ARR11(3)    <----------DOF2    --------->LBD16                                   ----------->ARR10 <-----------GT1      --------->ANAC46                               --------->ATHB12 ------->HSFB2a(1)    --------->HSFB2a(2)         <---------AHL20(2)--------->ICU4          --------- --------HSFB2a(1)   <---------LBD16        --------->YAB1          <---------YAB1   ----------->GT1 ------GLK1(2)--------->ICU4           <---------ARR11(3)         --------->YAB1<---------AHL20(2)   aattttctttttaataatttttatccggaattctataccgagataatcatattttttcttgaaaactatattgattagatatttacatagtaaaaaaaat  8780000                                         <---------AHL20(2)                                        --------->AHL20(2)                          <---------AHL20(2)                               <---------YAB1        --------->LBD16   --------->AHL20(2)                            --------->ARR14(2)       --------------->AGL15      --------->TOE2(3) <----------DOF2    ------>MYB46(1)       <---------------AGL15   <-----------GT1     --------->TOE2(3)   ------>MYB83       ===============================================================================MADS_MADS     <    <-----------GT1       <---------YAB1<---------AHL20(2)        <-----------GT1      <-----------GT1  --------->KAN4(2)      <---------AHL20(2)        --------->TOE1(3)----------------->AG --------->ANAC55(2) >AHL20(2)               --------->AHL20(2)     <-----------GT1<----------DOF2         <---------AHL20(2)   agaatatttccccatattgaagagcattttaattaaccaaaatttttttgttacctttaccatgtctttaaccaaatatgtttagctatttacttaatat  8780100                                                                 ------->TEIL                  --------->SPL7                         --------->AtLEC2                 --------->MYB52(1)                      --------->ANAC58                <---------SPL7          --------->CCA1(2)--------->ANAC46            <-----------GT1          ----------->ARR10   --------->ANAC55(1)      ---------->DOF2        --------->ARR11(3)           --------->MYB59     --------->ANAC58     --------->ZAT6        <---------ARR11(3)  <---------ANAC46           <---------ALFIN1     -------->HAHB4     <-----------GT1        <---------ANAC58          <---------REM1(2)    <---------YAB1  <---------    <-----------GT1         <---------ANAC58        --------->ANAC46     --------->YAB1    ---------- ----------DOF2<---------DAG2 <---------MYB52(1)<-----------GT1<<<<<<<<<EIN3--------->YAB1 <---------ICU4   cacttttaaacatcttaccttacgactatttcgtttagttagatatgtttctactctccacgcaatgtatatgtataataatactaaagaaaattagtac  8780200                                                              --------->ZAT18                                                              <---------ZAT18                                                              <---------ZAT14                                                          <---------DEAR3(1)                                                        <---------ANAC58                                                       <---------AtMYB61                                              ---------->DOF2 --------->ZAT14            ---------->DOF2               --------->ALFIN1--------->ALFIN1            ======================================bZIP_DOF<---------AtMYB61        <---------ZAT6                  <---------At4g35610<------MYB46(1)       <---------ANAC46                 <---------bZIP60(2)<------MYB83    <---------YAB1                      =================bZIP_DOF  <---------ICU4                        <---------TGA1a<------NtERF2 <---------AHL20(1)                     --------->At4g35610<---------MYB46(3)              <--------- --------->AHL20(1)          --------->ICU4 <------NtERF2<---------ABI4(1)      --------->ANAC58 --------->AHL20(2)     --------->ANAC58<---------O2 --------->ALFIN1           --------->ANAC58 <---------AHL20(2)     --------->ANAC58<---------ANAC46<---------ANAC58    ------>ZmHOX2a(2) ------AtSPL8         --------->CCA1(2)<---------AtMYB61<---------ANAC46  --------->ARR11(3) ----->AtSPL8       --------->CCA1(2)  --------->ALFIN1--------->ALFIN1   <---------ARR11(3)        <   taaaatattactggtaaagaagagataggccataaataggtgaggtggcaaagaggtggggtggtgcagttttgttgatctcaaggcattgtgtttccct  8780300                                               <---------AHL20(2)                                              --------->AHL20(2)                                             <---------AHL20(2)                                           <---------YAB1                                         --------->ATHB51                                    <-------             <----------DOF2       --------->ANAC58         ----------->GT1                  --------     --------------->AtSPL8        --------->ANAC58    <---------CCA1(2)          --------->ANAC58    <----------DOF2                --------->ANAC46  <---------ANAC58             --------->ANAC58    --------------------->WRI1   <---------ALFIN1    <---------ANAC58         --------->ANAC58 --GT1  <-----------GT1   ---------->DOF2--------->AHL20(2) <---------YAB1    --------->ANAC58 -----------GT1     ------>ZmHOX2a(1)   <---------MYB52(1)--------->YAB1      --------->ANAC46   attttcctttgtactctttctcctctcttaaatcgccactccattattttaaatttcttatcttgataaaacacacacacacacaagtattagaagaact  8780400                                                                                                    -                                                                                                  ---                                                                                                  ---                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                    --------->GLK1(1)                           -----                                           --------->ANAC58                                     <----                                           --------->ANAC58                                     <----                                       --------->ANAC58             --------->ANAC58           ------        <---------TOE1(2)       <---------AHL20(2) <---------GLK1(2)--------->ANAC58           ------ --ARR11(3)                    *TSS    --------->ANAC46 <---------HSFB2a(2)                    <----- ->ARR11(3)         ------>ZmHOX2a(1)  --------->ANAC58 --------->HSFB2a(2)          ---------->DOF2<   taaaccctcttatgttctcttcctaagcttgagtttaattcaagcaagaaacagatttcgagagaagagtaagcacagagatagagagaaagaaggcacc  8780500 --------->TOE2(3) --------->TOE1(3) ---------------->AGL2 --->MYB83 --->MYB46(1) -----MYB111(1) -----MYB111(2)                        <---------ANAC58 ---->MYB46(3)                         <---------ANAC46 -----MYB55(2)                         <---------ANAC58 ---->AtMYB61                         ---------->ID1 -----MYB46(2)              <-----------GT1 -----MYB52(2)            --------->AHL20(2) --->ANAC58               <---------AHL20(2)                                        ------>ZmHOX2a(1) --->ANAC58            <---------ARR11(3)                            ------>ZmHOX2a(1) -NtERF2          --------->TOE1(2)<----------DOF2                  --------->TOE2(3)        <<<<<<<< -----------------AGL3 --------->ARR11(3)       <---------TOE2(3)   --------->TOE1(3)  ------>ZmHOX2a(1)   aaaccctaaatgggtctaaacccaagattttaatcttcttttcgtattttgaggcaaatgtctcttcattccttaatcttcttctcctcctcttcttctt  8780600                                                                    <---------HSFB2a(1)                                                                    --------->HSFB2a(1)                                                                    <---------At4g35610                                                                    <---------HSFC1(2)                                                                --------->LBD16                                                               --------->ANAC58                                                               --------->ANAC46                                                              <---------LBD16                                                           --------->ARR14(2)                                                           <---------ARR14(2)            <---------ANAC58                                                       --------->ZAT14        <----------DOF2                                                       <---------ZAT14        ------>ZmHOX2a(1)                    <---------ARR11(3)                 --------->At4g35610   --------->TOE2(3)                 <----------DOF2               --------->At4g35610  --------->HSFC1(2)   <---------ANAC58 <TBF1    <----------DOF2                     ----------->HVH21--------->ANAC58     <---------ICU4   cacttctcttctctttcttctttatcttcatcttctgtttctctctctctgatgcagagcagaacccggaagcttctatcctttactcatggcttcactc  8780700                    <----------DOF2             xxxxxxxxxxxxxxxx>smallRNA(s)        --------->REM1(1)                                      --------->MYB46(3)        <---------ALFIN1                                  --------->AtLEC2       <---------TOE1(2)      ------>ZmHOX2a(1)                            <---------ALFIN1        --------->YAB1   ttcttctcctacaccttcttctctttctctcttcaactggaactctatagacaacactccttgcaacaactggacatttatcacatgttcttctcaaggt  8780800                                                     --------->HSFB2a(1)                                                     <---------HSFB2a(1)                                                    --------->ARR14(2)        <---------GLK1(2)      <---------DDF1------->TEIL                    --------->GLK1(2)         --------->ARR14(2)      ----------->RAV1(1)                    --------->HSFB2a(2)              <---------ARR14(2)    <     --------->DEAR3(1)                      <---------HSFB2a(2)            --------->LBD16  --------     ----------->HVH21                    ------>ZmHOX2a(1)                <---------HSFB2a(2)  -----     --------->At1g77200           <---------At4g35610            <---------ANAC58          <--------     --------->DEAR4(1)            --------->At4g35610            <---------ANAC58         <---------LBD16     --------->DREB2C(2)           --------->ZAT2  <---------GLK1(2)       --------->HSFB2a(2) <-----   ttcatcaccgacatagacattgaatctgtccctcttcagctctccttaccgaagaatctcccagcgtttcgttctctccagaaactcactatctccgggg  8780900  Previous    Next  AGI:  At3g24240.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. Identical to Receptor-like protein kinase 2 precursor (RCH2) [Arabidopsis Thaliana] (GB:Q9LHP4;GB:Q84RP5); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G26540.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G48940.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G56040.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71564.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73805.1); similar to unnamed protein product [Vitis vinifera] Range:  from: 8780431    to: 8784375    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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