Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->ANAC58             --------->ANAC46                                                    <---------ALFIN1             --------->ANAC58                                                    --------------->AGL15            ------>ZmHOX2a(1)                                                   --------->ANAC46      --------->At4g35610                        ----------------->AGL1    --------->YAB1    --------->YAB1                             ------------------------>ANAC81--------->ANAC46  --------->ANAC58 <---------ICU4     --------->GLK1(1)             --------->YAB1  --------->ANAC46 --------->YAB1 --------->ANAC58                <---------KAN4(2)   ---------->DOF2  --------->ANAC58<---------YAB1  --------->ANAC46      ----------->GT1   <---------ATHB12      <---- -------->MYB46(3)--------->ICU4  --------->ANAC58    ---------->DOF2   --------->WOX13(1)      -----   caacaagcatcttcctcgccatgattatgcagactcacacaaatccaaactgccaaaaaagaaaatcgaataatcaatcaacaccacatgaagcaaaata  8734200                      <---------ARR14(2)                                -------->HAHB4                      ------->TEIL                                      <---------ICU4                 ----------->GT1                                        --------->YAB1          --------->MYB52(1)                                           --------->ICU4        <---------MYB52(2)                                             <---------YAB1      ------->TEIL--------->At5g28300            ==============HOX2a_HOX2a -------GT1 --------->MYB46(3)                   <------ZmHOX2a(2)   --------->YAB1       ------->TEIL ---->MYB52(1)--------->MYB52(1) --------->At4g35610    <------ZmHOX2a(1)        --------->TOE1(2)  <   acgaaatgaaactaacaaacagtgaatctcgaatcagcaaaaacaaacccgatcgataggatgtttgtctataatgatgaaatcgttcgatgaatcgcga  8734300                                                                                            <------ZmHOX2a(1)                                                                                           ----------                                                                                       --------->ALFIN1                                                                                 <---------LBD16                                                                                 <-------TEIL                                                                                --------->CCA1(2)                                                           <------ZmHOX2a(2)    --------->ARR14(1)                                                           =====================================HOX2a_HOX2a                                         --------->ANAC58 ------------------------>ANAC81<------ZmHOX2a(1)                                    ----------->RAV1(1)   --------->ARR11(3)   <---------GLK1(2)                     --------->TOE2(3)   --------->ANAC58 <---------ARR11(3)   --------->ARR11(1)                     --------->TOE1(3) ---------->DOF2---------->DOF2          <---------ARR14(2)  ---------->DOF2 <-----------GT1  <----------ID1--------->ZAT6                --------->ARR14(2)---- ---------YAB1 <---------ZAT6  ---------->DOF2  --------->ZAT18              ----------->ARR10  -----   atatcaaagaagaagcagtgttaccttaagcgttgaagcgacaaagcaagaacactaaaagatcaagagaagagagacacagatacggagaggaggaaat  8734400                                                                                                    <                                                                                                    -                                ------>ZmHOX2a(2)                                                   <          <---------ANAC58     <---------GLK1(1)                                                   --          <---------ANAC58    <---------AGP1                                                       <-     --------->ATHB12         <---------ARR11(3)                                                   --     -------->HAHB4    <---------AHL20(2)                                                         ---    <---------YAB1 <---------ZAT6                                                                <---    <---------ATHB12--------->TOE2(3)                                                           -----    --------->ICU4 ----------->GT1                                                            ------- ->GT1    <-----------RAV1(1) --------->ARR11(3)                                              <------ ----->YAB1  <---------MYB46(3)--------->GLK1(1)                                       ---------->DOF2 ---->ICU4<---------ANAC46   <---------CCA1(2)                 --------->ZAT6     <---------TOE2(3)<-   aatcaaatgattgtgtgggtaatgttaaattggatctcttcttaatcacacatcgatattgttttacactgacttaagtttttttaggctaaagtcatta  8734500      <-----------GT1    <---------AHL20(2)    --------->AHL20(2) ---------YAB1 -------->AHL20(2) ---------AHL20(2) ------->AHL20(2) --------AHL20(1)                    <---------DAG2 ------->AHL20(1)                    <----------DOF2 ------>YAB1                        --------->TOE2(3)            --------->ANAC58 ------YAB1                       <---------ARR11(3)     <---------ZAT18 ---->AHL20(2)                <---------ICU4             --------->ZAT18                        <---- -->ICU4                 <---------WOX13(1)         *TSS --------->ZAT14                ---------->DOF2 ---YAB1               <<<<<<<<<RAP2.2            ------>MYB46(1)--------->ANAC58   <------------CBF --------AHL20(2)     <---------TOE2(3)           ------>MYB83   --------->ANAC46------------>CBF   atataattaaaccattgagttttttagattgatcaatacctttatgtataccaacttagtgctccctacgaaacatatgctcaaacaattgaaagcgact  8734600                                                                                                 <---                                                                                           <---------ANAC58                                                                                      <---------bZIP60(2)                                                                                      <---------O2                                                                                      --------->TGA1a                                                                                      <---------TGA1a                                                                                      --------->O2                                                          <-------TEIL                <---------ANAC55(2)                                                          ------->TEIL                --------->ANAC55(2)                                                          --------->SPL7              <---------ANAC55(1)                                                        <---------SPL7                <---------ANAC46                                                       <---------ANAC58               <---------ANAC58                                                    --------->DAG2                    ===============                                                   ---------->DOF2                    ===============                                              ----------->GT1             --------->AHL20(2)<--------                               <---------TOE1(3)   =============================================bZIP_DOF                 <---------HSFB2a(1)         --------->ANAC58         <---------YAB1  <---------ANAC58                 --------->HSFB2a(1)         --------->ANAC58 <---------DEAR3(1)      =============== ------DOF2    <---------GLK1(2)       <------------CBF<---------ANAC58  <---------YAB1    <---------ANAC58   tttaaaacgaagacatggaatctttcaaaacttaaggtctaaattgaacgctaaaaagcgtacgtaggcgttgtcattatatgctcttacgtggcttttc  8734700                    ------>MYB83                    ------>MYB46(1)                   ----------->RAV1(1)                   --------->MYB52(1)        --------->ATHB51        <--------ATHB1                                                                             --        <---------ICU4                                                                             <-       <---------ATHB12                                                                         -----       --------->ICU4 ------->GAMYB                              <---------AHL20(2)            ------ -------DOF2      --------->AtMYB61                             <---------AHL20(2)             <----- =============================MYC_MYB                           --------->AHL20(2)         <--------- ==bZIP_DOF      --------->MYB46(3)                          --------->AHL20(2)           --------->O2 --DOF2<---------ATHB51     ---------->DOF2                 <---------YAB1                --------->ANAC58 ==bZIP_DOF     ------------------------>ANAC81         <---------GLK1(2)                 --------->ANAC58   ttttagccaataattcaaaaccaacagaagaaaagaagaacacaaattgttcttctcagattattatttattatctaaacaaaacaagagtcaagtcacc  8734800                                                                                   <-----------GT1                                                                                  <---------YAB1                                      <---------------AGL15                    <---------YAB1                                      --------------->AGL15                    <---------AHL20(2) --------->ANAC46                 --------->YAB1                              <---------AHL20(1) ------->AtMYB61         --------->ANAC55(2)                                <---------YAB1 --------ALFIN1          <---------ANAC58          <---------DAG2           <---------TOE2(3) ---->AtMYB61            <---------ANAC58          <----------DOF2         <---------AHL20(2)       < --->At4g35610          <---------TOE2(3)   <---------TOE2(3)              --------->AHL20(2)      <- ----At4g35610         <-----------GT1<----------DOF2                      --------->YAB1    <------ZmHOX2a(1) --HVH21         ----------->RAV1(1) <-----------------AGL3        ------>ZmHOX2a(1)      <---------LBD16   tccacaccaaaatgttgaacaacatttacgtttccatcatctttttatggaaacttttcccacatactcctctctattaatattattacaactcaggaac  8734900             ------>ZmHOX2a(1)         --------->ARR14(2)       ----------->ARR10     <---------MYB52(1)    <------NtERF2   <---------DEAR3(2)  <---------RAP2.6(2)                                                                 <---------CCA1(2)  <---------ANAC46                                                                <---------ANAC58  <---------DEAR3(1)             ------>ZmHOX2a(1)           <---------ICU4       <---------ANAC46 --------->RAP2.6(3)    <-----------GT1                      --------->YAB1       <---------ANAC58 --------->DDF1  --------->TOE2(3)              <<<<<<<<<MYB98                  <---------AHL20(2) -----------HVH21--------->TOE1(3)      --------->AHL20(2)--------->YAB1----------->GT1------->TEIL ----------RAV1(1)------>ZmHOX2a(1)<----------DOF2      <---------MYB52(1)      <-----------GT1   <--   tatgtcggctagttcctctccttaaataacatttcctcttttttatatatgttactccgataatcatatcagagatgtgaatttacttgtatcttatata  8735000                                                                                                    -                                                                                                    <                                                                                                 <---                                                                                         <---------HSFB2a(1)                                                                                         --------->HSFB2a(1)                                                                                         --------->HSFC1(2)                                                                                         <---------HSFC1(2)                                                                                        <-----------ARR10                                                                                        --------->ARR14(2)                                                                                        --------->GLK1(2)                                                                                        <---------ARR14(2)                                                                                        <---------ARR11(3)                                                                 <-----------GT1        --------->ARR11(3)                                                        <---------ANAC46            <---------HSFB2a(2)           --------->ATHB12                             <---------ANAC58            --------->HSFB2a(2)          <---------ATHB12                              <---------ANAC58            --------->HSFC1(1) ---------GT1             --------->At4g35610      <----------DOF2     <----------DOF2 <---------GLK1(2)   taacaagaccgaatgatttagcaagaacagcttaatgctgaattaccaaaacactttgccttgtgtttcacaactttgaagttgttcgagaatcttcggc  8735100  Previous    Next  AGI:  At3g24170.1    Description:  ATGR1 (GLUTATHIONE-DISULFIDE REDUCTASE); glutathione-disulfide reductase. Identical to Glutathione reductase, cytosolic [Arabidopsis Thaliana] (GB:P48641;GB:Q94BM6;GB:Q9C5I4); similar to GR (GLUTATHIONE REDUCTASE), glutathione-disulfide reductase [Arabidopsis thaliana] (TAIR:AT3G54660.1); similar to Glutathione reductase, cytosolic (GR) (GRase) (GB:O04955); similar to glutathione reductase [Vigna unguiculata] (GB:ABB89042.1); similar to glutathione reductase [Brassica oleracea] (GB:BAD14936.1); contains InterPro domain FAD/NAD-linked reductase, dimerisation; (InterPro:IPR016156); contains InterPro domain Pyridine nucleotide-disulphide oxidor Range:  from: 8729517    to: 8734552    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g24180.1    Description:  catalytic. similar to catalytic [Arabidopsis thaliana] (TAIR:AT1G33700.2); similar to catalytic [Arabidopsis thaliana] (TAIR:AT5G49900.1); similar to catalytic [Arabidopsis thaliana] (TAIR:AT1G33700.1); similar to unknown protein [Oryza sativa] (GB:AAL31035.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71587.1); similar to hypothetical protein OsI_032861 [Oryza sativa (indica cultivar-group)] (GB:EAY78902.1); contains InterPro domain Six-hairpin glycosidase-like; (InterPro:IPR008928); contains InterPro domain Beta-glucosidase, GBA2 type (InterPro:IPR014551); contains InterPro domain Protein of unknown function DUF608 (InterPr Range:  from: 8734641    to: 8741732    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version