Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------ANAC46                                                        --------->SPL7                                                      <---------SPL7                                                     <---------ANAC58                                                     <---------ANAC55(2)                                                     --------->ANAC58                                      ----------->GT1<---------ANAC58                                     <---------HSFB2a(2)------->TEIL                          <------ZmHOX2a(2)          --------->ANAC58                           -----                         <---------ARR11(3)          --------->ANAC55(2)                       <-----                         --------->ARR14(3)         <-------TEIL                          <-------GAMYB                         <---------ARR14(3)         --------->SPL7                       --------->MYB52(2)                         --------->GLK1(2)          ------->TEIL  <---------ICU4         --------->MYB55(2)                         --------->ARR11(3)         <---------TOE1(2)                    --------->MYB111(2)                         --------->ARR14(2)       --------->TOE1(2)                      <---------MYB46(3)                         <---------ARR14(2)       <---------SPL7 --------->ICU4          --------->MYB111(1)                        <------ZmHOX2a(1)         --------->TOE2(2)<----------DOF2      <--------P --->WOX13(1)         <---------TOE2(3)         <---------------AtSPL8             <---------ANAC58 -ARR11(3)            <---------TOE1(3)         <---------------AtSPL3             <---------ANAC58 >ARR11(3)  ---------->DOF2------>ZmHOX2a(2)    --------------->AtSPL3         <---------------AGL15<   tcaatttgtataagaaaagagattaaggatcttgaaatactggaaaaaaaaacgtacgtaccgagtaatctttatccattgctattcgtggtagttgatt  8717800                                   <---------At4g35610                         --------->ANAC58 ---->YAB1               --------->ANAC58 ----YAB1             --------->WRKY18(1)     --------->MYB46(3) <---------MYB52(1)   --------->ANAC46 -----------GT1 <---------ATHB12 <---------WRKY18(1)    --------->At4g35610        <-------TEIL   ataaactgcttaagtctaatgaaggtcaagcttcttgacctgatgacaacaatccatgagcttcacagtcagttttaaaaacatatacatgaaacaaaaa  8717900                               <---------At4g35610                        --------->TOE2(2)                        --------->TOE1(2)                     ------>MYB46(1)          ----------->GT1      --------->At4g35610 <-------TEIL       <---------------AtSPL8 --------->ANAC58    ------>MYB83          <-----------GT1        <---------AHL20(2) --------->ANAC58  --------->AtMYB61--------->ANAC55(2)        ------->TEIL --------->ANAC46  <---------MYB59  <---------ANAC55(2)  <-------TEIL --------------->AtSPL8   cacacgtagaacaagttaaaaccaaacctaggcagattacatgtttcaccatatacatatacatgtattttatatgtacaaaacaagttttcaaattgaa  8718000                               --------->AHL20(1)                               --------->AHL20(2)                               <---------AHL20(1)                            ------>MYB83                   <---------WOX13(1)                 -------->HAHB4--------->ARR11(3)                 --------->ATHB12                --------->ICU4 <---------ARR11(3)                <---------YAB1 <---------AHL20(2)            --------->AHL20(2)--------->AHL20(2)                                       --------->ATHB12       --------->AHL20(2)   ------>MYB46(1)           <------ZmHOX2a(1)     ----------->HVH21       --------->YAB1  --------->ZAT6    <----------DOF2            ---------->DOF2   <---------YAB1   ttttgacaattaaaaaaaatgattaacaccaaatatattagagctttgtttagtaaggagttaacaaaataaaagggactgaccttgtatgatttgctag  8718100                                --------->ANAC58                                --------->AtLEC2                                --------->ANAC58                       --------->ANAC46                                                    <---------                       --------->ANAC58                                                    <---------DAG2                       --------->ANAC58                                          --------->ALFIN1                  ---------->DOF2                                             --------->DAG2                <---------AHL20(2)    <---------ARR11(3)                <---------------AGL15             ------->TEIL  --------->ANAC58                            --------->TOE2(3) <---------At4g35610          ----------->GT1  --------->ANAC58                    <----------ID1---------->DOF2   ggtttacgagagatgtatataaaagacgcaagacatgcaagatagtagaagaagacggattagagaagacaaaacttaaaaaagtgaggggagctttttg  8718200                               <---------ZAT2                               --------->ZAT2                              --------->ANAC58                             --------->ANAC58                              ------>MYB46(1)                              --------->ANAC58                      --------->YAB1                                  <---------ZAT14                    --------->ANAC58                                  --------->ZAT18          ------                    --------->ANAC58                              <-------MYC3                 <-----                  *TSS<---------ICU4    <-----------TBP<-------TEIL --------->ZAT14            <-----          <---------YAB1      --------->ANAC58        --------->CCA1(2)--------->ANAC46       ------- -DOF2    --------->ICU4      ------>MYB83<---------AHL20(2)      ------->MYC3            <------NtERF2   tattgagaagtcataaatgagtaagcatcaccaagctcccatatttatagagagagatacattatacatgtgtacacaaggtatagcaagggggcattaa  8718300                       <--------HAHB4                        <---------ZAT18                       --------->ATHB12            --------->ALFIN1                       <---------ICU4            <---------ANAC58             <---------ATHB12                      --------->ICU4             <---------ANAC58     ----------->HVH21                      <---------ATHB12     <---------ICU4--------------->AtSPL8            <--------- --->AHL20(2)         <---------YAB1      --------------->AGL15     <---------ANAC58     <---------AHL20(2) ----AHL20(1)    --------->YAB1           <---------------AGL15     <---------ANAC58     --------->AHL20(2) ----AHL20(2) --------->KAN4(2)          <-----------------AGL2    <-------TEIL--------->YAB1 -->AHL20(2)------->TEIL               <-----------GT1   <---------------AtSPL8--------->AHL20(2)   atttcttaagtatgtatattcgtaatcatttgtttctctaattactaattagggtgtgaatggtacacattcgtgacccaataaaaacaaattaaacgac  8718400           --------->TOE2(3)          --------->ANAC55(2)          <---------ANAC55(2)          --------->ANAC58          --------->ANAC55(1)                                       <---------ARR11(3)          --------->ANAC58                                          --------->ARR11(3)         <-------TEIL                                               --------->GLK1(2)            <---        --------->ARR14(1)                                          <---------ARR14(2)         <-----        --------->CCA1(2)                                           <-----------ARR10    <---------AHL20(2)       --------->ARR11(1)                                           --------->ARR14(2)   <---------AHL20(1)       <---------ARR14(2)                               ----------->GT1                  --------->AHL20(1)   ---------->DOF2                                    ---------->DOF2                    --------->ARR11(3) --GT1 --------->ARR14(2)                      ---------->DOF2  --------->YAB1      --------->TOE2(3)   ttaaaaaaagatacgtaaacatgtttcaaaaaaaaaaaaaacaattttctaaagaataaagataaatgaaaatctacataagttaatctaaaatattgag  8718500                         <---------MYB46(3)                           <---------ICU4                        --------->ALFIN1                             <---------YAB1                    <---------ZAT14                     --------->YAB1--------->ATHB12                    --------->ZAT14           <----------TaMYB80     --------->ICU4                  <---------WOX13(1)        --------->YAB1 -------->HAHB4 ---ZmHOX2a(1)  --------->ATHB12           <---------YAB1 --------->ICU4               <-----------GT1 ----TOE2(3)   <---------YAB1   <---------AHL20(2)     --------->AHL20(2)      ---------->ID1   gattagtagtaagtagtttgattgcagtggctgttttattctactatcatattcccattaattatcgagacatcattgtttttcgcaattttctatgcat  8718600                                                                                      --------->TOE1(2)                                                                                  --------->WOX13(1)              --------->DAG2     <-----------HVH21                            --------->CCA1(2)             ---------->DOF2 --------->WOX13(1)        <---------ARR11(3)     --------->GLK1(1)           <---------HSFB2a(2) --------->MYB46(3)      --------->GLK1(2)     --------->ARR11(3)           <---------------AGL15--------->YAB1         --------->ARR11(3)    <---------ARR11(3)           --------->HSFB2a(2)-------->P--------->AHL20(2)               ---------->DOF2           --------------->AGL15--------->AtMYB61--------->HSFB2a(2)   --------->AtMYB61          ----------------->AGL3------->GAMYB    <---------HSFB2a(2)   ------->GAMYB<---------ATHB12 <----------DOF2    ----------->GT1  <---------ANAC55(2)              --------->MYB46(3)           --   tctcttttagtttctaaaagtagagaaatatcaaccatcacataaaatgttttagaaaatctaaaaactacaaccaaaagatatcaatcgtgggaaaaat  8718700  Previous    Next  AGI:  At3g24140.1    Description:  FMA (FAMA); DNA binding / transcription activator/ transcription factor. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G22490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43552.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 8715243    to: 8718218    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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