Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------At4g35610                              <----------DOF2                                      --------->At4g35610                          <------MYB83                                             <---------ZAT2                          <------MYB46(1)                                          --------->ZAT2                        <--------P                                             <-----------GT1 ---->GAMYB             --------->ALFIN1                                  <---------DAG2 --->MYB52(1)        --------->DAG2                 <---------SPL7        --------->TOE2(3) -->MYB46(3)         <---------------AtSPL3    <---------AtMYB61       <---------DOF5.7(2)         <- ---GT1            ---------->DOF2      ------->GAMYB                --------->DOF5.7(2)------>ZmHOX2a(1)   cggtgttatcggcaagagtagaaaaggtagggctttgtgcaaccgagtaatggtcgtcccattcaactctcgttaacctttttccagctcctactagtac  8713000                              <-----------GT1                      <----------DOF2                ----------->GT1              --------->ANAC46                                     ---    ----------->GT1<---------ARR11(3)        --------->ANAC58                         <-----------GT1  ------->TEIL --------->ANAC46    <----------DOF2   ----------->GT1      <----------DOF2         --- --------YAB1 --------->SPL7<-----------GT1  --------->ANAC58<---------ICU4      <---------CCA1(2)---   tatgaacggtttttcatacggtatctttattttctctctttatatgcaagacatagagaaaaaacattactaagcactttcgcatatataacttcattac  8713100                                                                                                   <-                                                                                                  <--                                                                                                 ----                                        <---------ANAC58                                         <---                                  <---------ARR11(3)                                            <----                      <-----------GT1   <---------ANAC58            <---------TOE2(3)        <-------                   <---------ICU4 <---------AHL20(1)                <---------TOE1(3)    <---------YAB1                  --------->ICU4  --------->ARR11(3)               <---------DOF5.7(2)<---------ATHB12        --------->ARR11(3) --------->WOX13(1)                    --------->DOF5.7(2)  ----------->TGA1 ------>ANAC46    <---------YAB1  --------->AHL20(1)            <----------DOF2       ----------->HVH21 ------>ANAC58  --------->YAB1--------->YAB1          ---------->DOF2 --------->TOE2(3)--------->YAB1 ------>ANAC58 <---------YAB1<---------ATHB12   -------->P--------->MYB52(1)      --------->MYB46(3)   aagacatatagaacttcatgataattactcaatcaaaatattgctagactaacctgtaaagaccggctttaacgttgatgaagaaccaatgacgattgtt  8713200         --------->GLK1(2) --------WOX13(1)             <---------ANAC58                               --------->ARR14(2) -------ANAC46                <---------ANAC58                            <------MYB46(1) ----->ATHB12                 <---------ANAC46     <---------WOX13(1)     <------MYB83 ------MYB46(3)               ----------->GT1   <------NtERF2           <---------ANAC46  <---------ANAC58 -----YAB1        <----------DOF2             <---------LBD16         <---------MYB46(3)  <---------ANAC58 --MYB46(3)       <---------DAG2         <---------AtLEC2  --------->MYB46(3)--------->ZAT14  -------   gattggaacagaatcaatagctttttgtattgtcgtgaaatttccatggccggattgatcaacaaatacttgttgttggtatactccgaatggcttagct  8713300                                                                             <---------YAB1                                                                         <---------GLK1(2)                                                                    <-----------GT1                                                                   <---------YAB1            <---------ETT(2)                                     <--------HAHB4         <---------ANAC46                                        --------->ATHB51        <---------AtMYB61     <---------------------WRI1         <---------ICU4                  ----      --------->ALFIN1     ---------->DOF2                      <---------YAB1      --------->ATHB12 <---------ATHB12        ---------->DOF2                 <---------GLK1(1)--------->GLK1(2) --------- -->At4g35610        <----------ID1         --------->YAB1      --------->ICU4     <---------YAB1----   tcaatgaggtgaggtagacaaaaacaacaaagagcgatgagacctatgaaaattcgatgagttcccattattacagtttctgattttgattagatggtaa  8713400   --------->TOE1(2)                                                   <---------ANAC58   --------->TOE2(2)                                           <-----------GT1  <---------ANAC55(2)                                     <---------AHL20(2)  --------->ANAC58                                      <---------RVE1(1)  --------->ANAC58                  <---------ZAT14    <---------ARR14(2)                         ---  --------->ANAC55(2)          *TSS --------->ZAT14    --------->ARR11(3)            <----------DOF2 ----->ANAC58             --------->At5g28300          <---------ARR11(3)   ----------->GT1       --- -->GT1                  ----------->GT1               --------->ARR14(2)<---------MYB52(1)     <---- ----->ANAC58           ----------->GT1 <---------ZAT6<------ZmHOX2a(1)<---------ANAC58       <------   cgaaacgtaagagttttaagagagggagggtaaatgagagtagtggaagaaatggaggatttttttaacaaggtcgtgaggttaatgcttttttagttaa  8713500                 <---------ARR14(2)         <---------YAB1     --------->AHL20(1)     <---------AHL20(1)     --------->ARR11(3)    <----------DOF2    <---------AHL20(2)  <-----------GT1   --------->ICU4<---------ARR11(3) ------>YAB1     --------->ARR11(3)                    <---------AHL20(2)   --------->GLK1(2) -------->GT1    <---------GLK1(2)                ----------->GT1   ---------->DOF2 --------CBF     --------->ARR14(3)          <---------ANAC55(2)  <---------YAB1            --------- ---AHL20(2)     <---------ARR14(3)  <----------DOF2   <---------YAB1<---------TOE2(3)------->TEIL   ttgtaaatattttgatgaagattttgttactttgttttcctttgattatgtgaggtttttattgtgctattaaagtagaatctaaatgaaactggaaagt  8713600                            <---------ARR14(2)                            <---------ARR14(3)                            --------->ARR14(3)                            <-----------ARR10                            --------->ARR11(3)                            <---------ARR11(3)                            <---------AHL20(1)                            --------->AHL20(1)                            --------->ARR14(2)                           <---------CCA1(2)                       ------>ZmHOX2a(2)                 <------MYB46(1)             --------->ARR14(2)             <---------GLK1(2)             --------->ARR11(1)             <---------ARR14(2)          --------------->AGL15          --------->HSFB2a(2)          <---------HSFB2a(2)          <---------------AGL15                                      ----------->GT1            -----         <-----------------AGL2                             ---------->DOF2          >>>>>>>>>ARR2         <-----------------AGL1                           --------->ANAC58          --------->ATHB12  <----------DOF2<------MYB83                             --------->ANAC58         <---------YAB1---- ->DOF2  <-----------------AGL3                   ----------------->AGL1  --------->ICU4 <---------TOE2(3)   ttggctttgtttctagatttggtgatccaatatcttggttttatgtgagaggtccgaaacaagaaaggaagttgtaatatttgttttgattgtggtaact  8713700                                                <---------YAB1                                               --------->AHL20(1)                                              --------->AHL20(2)                                              <---------AHL20(2)                                             <---------AHL20(2)                                             --------->AHL20(2)                                          --------->AHL20(2)                                          <---------AHL20(2)                                         <---------YAB1                                       --------->YAB1                                      <---------YAB1                                    --------->YAB1                                    <---------ICU4                                    -------->ATHB1                                   <---------AHL20(2)             <---------MYB46(3)    --------->AHL20(1)          --------->MYB52(2)       <---------YAB1    ---------->DOF2                --------->AHL20(2)    --------->TOE2(3) ------>GT1 <---------ZAT6         --------->ICU4 <---------AHL20(2)                            ----- ----->At5g28300            ----------->GT1  <---------AHL20(1)                             <--------   gtaaataaaagttagtggtcgagactaaaattgaaaaattattataaattattttaaaaacttaatacatagtggttttattttgtatagagattacact  8713800                                                  <---------ARR11(3)                                                  --------->ARR11(3)                                            ----------->GT1                                           --------->MYB59                                           <---------TOE2(3)                                      --------->AHL20(1)                                      <---------AHL20(1)                                           <-                                      --------->AHL20(2)                                           <-                                      <---------AHL20(2)                                     --------                                     <---------------AGL15                                   --------                                    <---------TOE2(3)                                        <-------     ----------->GT1              --------->AHL20(2)       <---------At4g35610               <------- ------>GT1                       <---------AHL20(2)       --------->At4g35610      --------->YAB1 <- -ZAT14                 <-----------HVH21  <---------TOE1(3)                 --------->YAB1 <--------   gaaaaaatggtagaaaacttgaaatttgtcatacaattaatattttaggttaaatctttgtagatgactctatccacattgataaatgataagtatatct  8713900  Previous    Next  AGI:  At3g24130.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G18990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68809.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 8711670    to: 8713431    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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