Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->ATERF1(1)                                                                                        --------->At4g35610                                   --------->MYB46(3)                                   <---------At4g35610                             <---------ICU4                <-----------RAV1(2)    <---------ANAC58                            --------->ICU4            --------->LBD16  <------ZmHOX2a(1)<---------ZAT2                  --------->YAB1  ------->TEIL       --------->HSFB2a(2)          <---------ANAC58                 <---------ZAT6<---------YAB1    --------->At4g35610 <---------TOE2(3)  --------->ZAT2      --------->TOE2(3)--------->ZAT6  --------->AtMYB61<------ZmHOX2a(1)         <---------ANAC46   gttagaaacctcatagttagtgataacaccattatgaaccaccaaaaaatcatctccaggaccagaagattgaggatgactattccttggagctggctca  8700600                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                 <---------TOE1(2)                                --------->LBD16              --------->TOE1(1)                                  <---------ANAC55(2)              --------->TOE2(1)                                  --------->ANAC55(2)           <---------ZAT2                                     <---------ARR14(2)                    -         <---------ALFIN1                                     --------->ARR14(2)                   --        <---------ZAT18            ---------->DOF2        <-------TEIL --------->YAB1     <---------HSFB2a(2)   ccatgagtagcccacctcgtatgtgcaattccagcatgaaagtagaaaacttcgtctagattcaaatccgtattcgtaatctctgcaaaaatcgagaaac  8700700                                                            --------->DAG2                                                           ---------->DOF2                                                        --------->ANAC58                                                        --------->ANAC58                                                      <---------MYB52(1)                                                     --------->LBD16                                                    --------->ANAC55(2)                                                    <---------ANAC55(2)                                                   <-----------------------TaNAC69(2)                             <----------DOF2       <-------TEIL              ------->GAMYB                          ------>NtERF2            ------>ZmHOX2a(2)        --------->ANAC46                        <------NtERF2             <------ZmHOX2a(2)       <---------DOF5.7(2)                        --------->ATERF1(1)      --------->ARR11(3)       --------->MYB52(1)    --------->ANAC46   <---------ATERF1(1)       --------->AGP1 <-----------GT1    <-----------GT1    --------->ANAC58   ------>NtERF2             <---------ARR14(2)     --------->DOF5.7(2)    --------->ANAC58  <---------DEAR3(1)         --------->ARR14(2)    --------->TOE2(3)   ------->GAMYB  ---------->DOF2                <---------ARR11(3)--------->TOE2(2) ---------->RAV1(1)--------->DAG2               <---------GLK1(1)  --------->TOE2(3) ------->MYB46(3)---------->DOF2                --------->GLK1(1) <---------HSFB2a(1)   aacaacacacaaaaattcagaaaggcgacgactttggattcaaaattcagagatccgtaagtaaagtaaccttcgttaacggaattaacaagtgattcaa  8700800                                                                     --------->YAB1                                                                   --------->GLK1(2)                                                                  <---------GLK1(2)                                                                  <---------ARR14(2)           --------->ANAC46                                       --------->ARR14(2)         <---------WRKY18(1)                                  --------->At4g35610       <---------WOX13(1)                                     <---------ZAT2       <----------DOF2                                        <---------At4g35610      <---------ANAC58                                   --------->GLK1(2)      <---------ANAC58                         <---------YAB1 --------->ZAT2    ------>ZmHOX2a(1)         >>>>>>>>>TBF1   XXXXXXXXXXXXXXXXXXXXXXX>MIR404  <---------ANAC58      <------ZmHOX2a(1)    --------->YAB1 <---------HSFB2a(2)  <---------ANAC58--------->ANAC46  <------ZmHOX2a(1)    <---------ARR14(2)              <----------ID1   tgtttcctgcttgacgaaacacgagaggagaagaagaaggagaagaattatcaatggcgattccagcagaatcgtagcctctgtattcaagacgacgaag  8700900                                                               --------->HSFC1(2)                                                               <---------HSFC1(2)                                                               --------->HSFB2a(1)                                                               <---------HSFB2a(1)                                                        <-------TEIL                                                       --------->ARR14(1)                                                       --------->CCA1(2)                                                      --------->ARR11(1)                                                      <---------ARR14(2)      <---------MYB46(3)                                                      <---------GLK1(2)       --------->MYB55(2)                                                      --------->ARR14(2)      --------->MYB111(2)                                          --------->LBD16     ----------->ARR10<-------GAMYB                                 <----------DOF2    ----------->ARR10 <---------ALFIN1                       ------->TEIL      <---------ANAC46--------->ANAC58<-------MYC3               <---------HSFB2a(2)       <---------ANAC58<---------ANAC55(2) <--------P          ----               --------->HSFB2a(2)       <---------ANAC58--------->ANAC58------->MYC3       <--------   accattgaagagaacatcgagaatgtatcgtctctctttgttcgcgtgaaaattcagatacgcgaagattccacacatggttgttgtaatctctcttttg  8701000                                                        --------->GLK1(2)                                                       <---------GLK1(2)                                                     ----------->ARR10                                              --------->MYB52(1)                                             <------ZmHOX2a(1)              --------->CCA1(2)                                            <---------MYB52(2)             <---------GLK1(2)                                           --------->ANAC58                <---------ARR14(2)                                   >>>>>>>>>TBF1  --------->At5g28300      --------->ARR14(2)   <---- ------>DOF2                --------->At4g35610  ----------->GT1<---------AHL20(2)      <----------DOF2 --DOF2        *TSS  <---------LBD16       --------->ANAC58<---------YAB1----------->ARR10-----------   aaagaaaatgtttctcagtttttcgagggaagatgaagaagaagtaaggaacggtgagattcttattttttgactcagatttgggtttgactttgtaaat  8701100                                                         <---------MYB46(3)                                                        <--------P                                                       <-------GAMYB                                                     --------->ALFIN1                                                   <---------TGA1a                                                   <---------ANAC58                                                   --------->O2                                                   <---------O2                                                   <---------ANAC58                                                   <---------ANAC46                                                   --------->ANAC55(2)                                                   <---------ANAC55(1)                                                   <---------bZIP60(1)                                                   <---------ANAC55(2)                                                   ===============================================bZIP_DOF                                                   --------->bZIP60(1)                                                   ==============MYC_MYB                                                  ----------->STF1                                                ----------->TGA1                            <--------                              <-----------GT1   ----------->HVH21 <---------WOX13(1)   <---------DAG2                         <----------DOF2  <------ZmHOX2a(1)     --------->ATHB12       ==============                         ====================================bZIP_DOF                  <----------DOF2                       ---------->ID1    <---------At4g35610   <---------YAB1         <---------ANAC58 <------ZmHOX2a(2)   <---------ANAC58   >>>>>>>GRF7<---------bZIP60(2)        <---------ANAC58     <- -------GT1          <---------ANAC58  <-----------RAV1(2)     ------>ZmHOX2a(1)      <---------ANAC58 >GT1                <---------ANAC46<-----------HVH21<---------MYB46(3)      <---------ANAC58     --   acgatccataagtttggatagtttcgtctttttcacttctgtcaggagctatgacgtggttgttcctgattggacagatagcgagtttgcttttttgttg  8701200                            ------->MYC3                            ------->MYC2                            <-------MYC2                            ------->PIF5                            <-------PIF5                            ------->PIF4                            ------->MYC4                            <-------MYC4                            <-------PIF4                            <-------MYC3                           --------->ANAC55(2)                           <---------O2                           --------->TGA1a                           <---------ANAC55(2)                           <---------bZIP60(2)                           <---------TGA1a                  <---------ANAC58              <-------MYC3 <---------ANAC58                                     <---------AHL20(2)              ------->MYC3 <---------ANAC46                                     --------->AHL20(2)             <---------O2  --------->O2                                      <--------HAHB4             <---------ANAC58  <-----------------AGL1                        <---------ICU4             <---------ANAC58--------->ALFIN1   --------->MYB46(3)           --------->ATHB51     --------->MYB46(3)   ------------>OsbHLH66>>>>>>>>>>>>>>>>>LFY         --------->ICU4   <---------ARR14(2)  <-----------HVH21      --------->ANAC58              <---------YAB1   --------->ARR14(2) <---------ZAT6     <---------ZAT18                  --------->YAB1 ---RAV1(1)<---------ANAC46<---------ANAC58   --------->ANAC46      <------ZmHOX2a(2) ====================================bZIP_DOF --------->ANAC58     --------->AGP1           --------- --------At4g35610<---------ANAC58       --------->ZAT18          <---------At4g35610   --------->At5g28300 ------->At4g35610<---------ANAC46     --------->ANAC46           --------->At4g35610  ----------->GT1   gagcggaaccgctacgcgtggctagtgtcacgtgctgatataggccactagccactgtccctaagttcagatcaattcataattaaatacagtaaaaatc  8701300            --------->GLK1(2)                           --------->WOX13(1)           <---------GLK1(2)                         --------->TOE2(3)          <------ZmHOX2a(1)                          --------->YAB1        --------->MYB59                             ----------->GT1    <--------HAHB4                             --------->YAB1    --------->ATHB51                           <---------ICU4                       >>>>>>>>>RAP2.2    <---------ICU4                             <--------HAHB4                       --------->TOE2(3)   --------->ICU4                  <---------ANAC46 <---------YAB1               --------->WOX13(1)   <---------YAB1                ----------->GT1 --------->ICU4       --------->ANAC58 --------->YAB1                ------->MYC3   <---------YAB1          --------->ANAC58 >ICU4--------->ICU4           <-------MYC3   --------->ICU4        ---------->DOF2 --------->YAB1   aattcataattaggaatctctctgttttgaacatgtggtttataagttatcattatgttaatcaagtttcaaaagccaaatatcaatctaaatagaatag  8701400                                                                               --------->YAB1                        --------->MYB46(3)                                    <---------ATHB12                        <---------MYB52(2)                                  --------->WOX13(1)                       >>>>>>>>>MYB98                                    --------->ANAC58                   --------->TOE1(3)                                     --------->ANAC58                   --------->TOE2(3)                                    --------->SPL7                <-----------GT1                                       <---------SPL7            <----           ------>ZmHOX2a(1)                                         <---------ANAC58   --------->MYB46(3)           <---------YAB1                                            <---------ANAC58  --------->ANAC58          --------->TOE2(3)                                         --------------->AtSPL3   <-------       --------->ARR14(2)                                           --------------->AtSPL8   --------       <---------ARR11(3)               --------->TOE1(3)         <-----------GT1      --------->ANAC58       --------->ARR11(3)      ------>MYB83             --------->ANAC46------->TEIL --------->MYB46(3)       <---------ARR14(2)      ------>MYB46(1) XXXXXXXXXXXXXXXXXXXX>MIR415--------->MYB46(3)<-------- --------->ANAC46 --------->ZAT6        --------->TOE2(3) --------->ANAC46<---------MYB59   ---------   tagacacaatatcctaattaaccctaacaaaccaaatacttcccttaacaaaaaaaaaacacaacattctaccgtacccaatcaaaaacaaccaatgatt  8701500  Previous    Next  AGI:  At3g24090.1    Description:  transaminase. similar to glucosamine-fructose-6-phosphate aminotransferase, isomerizing family protein, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA91394.2); similar to hypothetical protein OsJ_033759 [Oryza sativa (japonica cultivar-group)] (GB:EAZ19550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40760.1); contains InterPro domain Sugar isomerase (SIS); (InterPro:IPR001347); contains InterPro domain Glutamine amidotransferase, class-II; (InterPro:IPR000583); contains InterPro domain Glucosamine-fructose-6-phosphate aminotransferase, isomerising; (InterPro:IPR005855) Range:  from: 8697845    to: 8701015    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g24093.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G22961.1); contains InterPro domain Paired amphipathic helix; (InterPro:IPR003822) Range:  from: 8701329    to: 8702473    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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