Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <----------DOF2        <-----------HVH21       --------->WOX13(1)   --------->YAB1                                                              ------->GAMYB  <---------ATHB12                                 ------>ZmHOX2a(1)          --------->MYB46(3)  --- --------->ANAC58                                 <---------MYB59         ------>ZmHOX2a(1)       --- --------->ANAC46       <---------CCA1(2)--------->At4g35610        <---------At4g35610           --- --------->ANAC58    ------>ZmHOX2a(1) ---------->CDC5              --------->At4g35610     ------>MYB83 -----DOF2    <---------At4g35610     ------>ZmHOX2a(1)          ------>ZmHOX2a(1)     <------ZmHOX2a(1) ->At4g35610  --------->ZAT2<----------DOF2  --------->SPL7 ------>ZmHOX2a(1) <---------MYB52(2)----- --At4g35610  --------->At4g35610<---------At4g35610   <----------DOF2   --------->TOE2(3)  ------>MYB46(1)   tccaagcatcagtcacagctttcctcgtttctttctgctcctcagcgtaagtcctaactttcctctcctcatcttcctcaacaaactcaggacctccctc  8696700                                                                           --------->TOE2(3)                                                                ------>ZmHOX2a(1)                                                            <---------ARR11(1)                                                            <---------ARR14(2)                      <                                               <<<<<<<<<TBF1--------->ARR14(2)                    --- ------>ANAC58                 --------->ARR11(3)          <---------CCA1(2)                      <-- ------>ANAC58               <-------TEIL   <<<<<<<<<TBF1<---------ANAC58-------->P            ------ ------>ANAC46    <---------ARR11(3)     <<<<<<<<<TBF1   <---------ANAC58------->TEIL     --------->ZAT14 ----->DOF2       --------->ARR11(3)  <<<<<<<<<TBF1 <----------DOF2     <-----------GT1   <---------ZAT14   aagcaaatgctgtgcctgaacatctttcaaatacatcttcttcttcttcttcttctttttcgtatccttcttatcaacctcatcttcttcactactctca  8696800                                             <----------DOF2                                             ------>ZmHOX2a(1)                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                                         <---------ARR14(2)                                         <---------ARR11(3)                                         --------->ARR11(3)                                   -------->HAHB4                                               <----                                   --------->YAB1                                               -----                                  <---------YAB1                                               ------                                --------->YAB1          --------->TOE2(3)                   ---------                              ===================HOX2a_HOX2a                                <-------- --------->YAB1               ====================HOX2a_HOX2a                    <---------TOE2(3) ---------YAB1                ------>ZmHOX2a(1)         --------->TOE1(3)   ------->TEIL<----------DOF2 ------>YAB1                 --------->TOE2(3)     <----------DOF2     --------->MYB52(1)  <---------LBD16 -------ICU4               ---------->ID1--------->ARR14(2)          <---------ATHB12  <---------ANAC58 --->YAB1              <----------DOF2  <------ZmHOX2a(1)        --------->MYB46(3)    <---------ANAC58   tcatcatactcatagaacttagcatctttgtccttaataataggatcctttttctttaccttaatcaacaaatcaacgaatttgagattgctttctggat  8696900                                                                                                  <--                                                                                               ------          --------->GLK1(2)                                                                  ------>ZmHOX2a(2)          <---------ARR14(2)                                                                <------ZmHOX2a(2)          --------->ARR14(2)                                                               <---------ARR14(2)         <---------GLK1(2)                                                                 --------->ARR14(2)     <------ZmHOX2a(2)                                                                     <---------ARR14(3)    <---------ARR11(3)                       <---------ARR14(2)     <---------YAB1         --------->ARR14(3)    --------->ARR11(3)                    --------->TOE1(1)        --------->KAN4(2)       <--------- -----GLK1(1)                             --------->TOE2(1)     <---------ANAC58           <---------GLK1(2) ---->GLK1(1)                            ------>ZmHOX2a(1)      <---------ANAC46           <---------ARR11(3) --->ARR14(2)             <-----------HVH21  --------->ARR14(2) <---------ANAC58           --------->ARR11(3) >HSFB2a(2)   --------->LBD16            <---------LBD16  --------->ARR11(3)             ----------->ARR10 -HSFB2a(2) <---------LBD16   <-----------RAV1(2)         <---------ARR11(3)    <---------CCA1(2) <--   ttccaagatcagaatccggctcagactccgtctcaggctcttcctcggactcgctgaagagaccttgcttattcttctcttcgtatcgctgaagatcctc  8697000                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -   <---------ANAC46                                                                                 -   <---------ANAC58                                                        <-----------TGA1         -   <---------ANAC58                                                       <---------ETT(2)         --  --------->MYB52(2)                                                     <------NtERF2             -- -------ANAC58                                    --------->TOE2(3)     <---------ATERF1(1)       <-- >ZmHOX2a(1)                          --------->ETT(2)                  ------>NtERF2             --- --ARR10     ----------->RAV1(1)    <---------DOF5.7(2)                --------->DEAR3(1)    <------- -------ANAC58 --------->MYB46(3) --------->DOF5.7(2)         ---------->DOF2     ----------->RAV1(2)   gcgttccttgttgtgcaacaatctcttagcgaaatcgttatcgacatcgaaacctttgaactgtgaaagttcgccgtcgtcatcatctggtatcgctttc  8697100          <---------YAB1       <---------ATHB12     --------->bZIP60(2)  <------NtERF2 <------NtERF2 <---------ATERF1(1) ------>NtERF2 ---------ATERF1(2) ---------ATERF1(1) -------->RAP2.3(2) -------->DEAR3(1)                                                                           -------- -------->ATERF1(2)                                                                      ---------->DOF2 -------->RAP2.6(2)            <------------CBF                                       --------->LBD16 ------->SPL7                  *TSS                                                  <---------ANAC46 ------->ATERF1(1)       --------->HSFB2a(2)                       <-----------TGA1 <---------LBD16 -------At4g35610        <---------HSFB2a(2)                 <-----------GT1     <------------CBF --->NtERF2            <---------At4g35610               <-----------TBP        <---------GLK1(2)   < ---DOF2--------->YAB1 --------->At4g35610             ------>ZmHOX2a(1)     --------->ANAC46<-------   ggccgccccatcatgctactagggcttctgcaaaattgttcaacttaagtctttctcctatttatacttcgtcatttatacagaattgcgcaaaagacct  8697200                                                          --------->AHL20(2)                    <----                                            <XXXXXXXXXXXXXXXXXXXXMIR863-5P                     <-----   <---------DAG2                      <---------AHL20(2) --------->ICU4                       <-----   <----------DOF2                     --------->ATHB12   <---------ATHB51                    >>>>>>> ->ARR11(3)                           <---------AHL20(2)  <---------AHL20(2)                  >>>>>>> -----------GT1                    --------->AHL20(2)--------->ANAC58                        -------- --ARR11(3)<---------GLK1(2)      <---------YAB1     --------->ANAC58         <---------YAB1<--------   tcttacttttctatattctcaaaatttgacaaaactattatttattgaaaataacaagaaataattcactaccaaaattgattatagatgttttatgatt  8697300                                                                            <------MYB83     <-----------RAV1(1)                                                    <------MYB46(1) -----MYB46(3)       <---------TOE2(3)                                     <---------AtMYB61 ----WOX13(1)      ---------->DOF2                                         --------->MYB59 ----YAB1<---------DEAR3(2)                                            <------MYB46(1) >>ARR2 <---------DREB2C(2)        <---------ZAT6                      <------MYB83 >>ARR1 <---------DEAR3(1)       <------MYB83                      <---------ARR14(2) ->ATHB12<---------MYB46(3)      <------MYB46(1)                   --------->ARR14(2) -YAB1<-----------HVH21  <-------TEIL                        --------->KAN4(2)              <--------   gttgtcaatgtcggttcgatataaaggttcatatttggtgttatagtataaactaggtatggacattcggatttggtttggtttgttttggattgagata  8697400                                          <------MYB46(1)                                          <------MYB83                                    <---------TOE2(3)                                    <---------TOE1(3)                                    <---------YAB1                              ----------->GT1                                  --------->YAB1                             <------ZmHOX2a(1)                                 --------->ICU4      --------->ICU4       <---------LBD16                                 <---------YAB1   <--------P              <-----------RAV1(2)        ---------->DOF2       --------->ICU4     <---------MYB52(1)  <------MYB46(1)              <--    --------->CCA1(2)  --------->ARR14(2)--------->MYB59             <------MYB83                 --- -TOE2(3)              <---------ARR14(2)<---------AtMYB61         <---------WOX13(1)   ----------->GT1   gtttggatataaaagttttgtatcgaatcggagttattatggtttggtttcggtaagtattggacttagattggtttcaggaaggaaaaacagtaagaat  8697500                                                           <---------ANAC58                                                           <-------GAMYB                                                           <---------ANAC46                                                           <---------ANAC58                                                          <------MYB83                                                          --------->ATHB12                                                          <------MYB46(1)                                                          --------->MYB55(2)                                                          <---------MYB46(3)                                                         <---------AtMYB61                                                       <-------GAMYB                                                      --------->MYB111(2)                                                      <---------MYB46(3)                                                      --------->MYB55(2)                                                      --------->MYB52(2)                                                    <-------GAMYB                                                    <---------MYB52(1)                                                   <------MYB83                               <------                                          --------->AHL20(1)  <------MYB83                    <------                                          <---------AHL20(1)  <------MYB46(1)         --------->GLK1(2)           <----------DOF2                --------->ARR11(3)<--------P                <---------ARR11(3) -------AHL20(2)                         --------->CCA1(2)--------->MYB52(2)    ----------->GT1 ------>AHL20(2)                <---------GLK1(2)  <------MYB46(1)     --------->YAB1 --------->ARR11(3)   ttttttatgtctactttgtttagtttcaaaaccaggttttcagatatattgttcggttgttggttggattcaagtataaatattgaaaaatctattcagg  8697600  Previous    Next  AGI:  At3g24080.1    Description:  KRR1 family protein. similar to Os05g0490000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055896.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ68729.1); contains InterPro domain Kri1 (InterPro:IPR007851) Range:  from: 8694968    to: 8697131    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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