Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                             --------                                                                                            ------->MYC3                                                                                            <-------MYC3                                                                                            ------->MYC2                                                                                            <-------PIF5                                          --------->TOE2(3)                                 ------->PIF5                                      <---------ICU4                                        <-------MYC2                                      --------->YAB1                          --------->TOE1(3)                                      --------->ATHB12                     <-----------GT1 ==========                                      -------->ATHB1           ----------->GT1--------->TOE2(3)  <---                                     <---------ATHB12          <---------bZIP60(1)         --------->O2                                <---------HSFB2a(2)            --------->bZIP60(1)         --------->ANAC46 --------ZAT14                  --------->HSFB2a(2)   --------->ZAT14   <---------AHL20(1) <---------O2 ------->ZAT14              <---------GLK1(2)   --------->TOE2(3) <-----------GT1          --------->TGA1a -->ZAT14          --------->YAB1 ------------>ATHB5  <---------ZAT14   <---------ARR11(3) <---------TGA1a   ctacagagtcatcaaaacctctcataacaaaattctcgaatcattgttaatctcaatacagtgtgatgttacaatatataccttagtttgtccacgtgaa  8680400                                                                                                    =                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                  ---                                                                                                 ====                                                                                                 ----                                                                                     --------->GLK1(2)                                                                                     --------->ARR14(2)                                                                          ===========================              <---------ICU4                                              <----------DOF2        ----   <------ZmHOX2a(1)  --------->ARR14(2)                               --------->ANAC58         <---- --->DOF2     --------->YAB1--------->ARR14(2)                         --------->ANAC46  --------->LBD16 --->HVH21   <---------ATHB12   <----------DOF2                        --------->ANAC58<---------LBD16 ====bZIP_DOF--------->ICU4<---------MYB52(1)<------MYB46(1) <---------At4g35610     <---------ARR14(2) ------At4g35610      <---------ARR14(2)     <------MYB83    --------->At4g35610 --------->YAB1------   gcagaggagagagcaataatctcagaaccgtttcctttgattacagtaggttttagctcgatgagctccaaacacgcttttaatcggaatccggagcaac  8680500        <------NtERF2       ------>NtERF2       --------->LBD16      <---------ANAC46     <------NtERF2     --------->ATERF1(1)     <---------LBD16    <---------ERF1    <---------RAP2.3(1)    <---------ORA47(2)    <---------DEAR4(2)    ------>NtERF2    <---------RRTF1(1)    <---------RAP2.6(1)    <---------ATERF1(1)   <---------RRTF1(2)   <---------RRTF1(3)   <---------RAP2.3(2)   <---------DREB2C(2)   <---------RAP2.6(2)   <---------ATERF1(2)   --------->DEAR3(1)   <---------RAP2.3(3)   <---------DEAR3(1)  <---------ABI4(1) ====================================bZIP_DOF                    --------->MYB52(1) ---------TGA1a                                                 --------->WRKY12 ---------O2                                                 --------->ATHB12 -------->ANAC46                                            <---------YAB1 -------->O2                                              <----------DOF2 -------->TGA1a                                         <---------At4g35610     <---------At4g35610 --------At5g28300                                      --------->At4g35610     <---------ANAC46 --------LBD16                                          --------->ZAT2          --------->At4g35610 ------>MYB52(1)                                        <---------ZAT2        <-----------RAV1(2) =========MYC_MYB                                 --------->At4g35610       <-----------HVH21       < ------->HVH21                   <---------At4g35610    <------NtERF2  --------->ANAC58            -- =========bZIP_DOF               --------->At4g35610 <------NtERF2<---------LBD16                  -- --->GAMYB <------ZmHOX2a(2)     <---------ZAT2   <---------At4g35610  --------->ANAC58      -------- -----MYB52(2)                   --------->ZAT2 ---------->CDC5 ----------->HVH21 --------->ALFIN1--- --->At4g35610            <----------DOF2      <---------ZAT14 <---------WOX13(1) <---------REM1(1)--   tcacggcggcgggatcaagaacccaaggctttcggagctgagaagcgagttcagcggcagctttcattgacggaagccagtcaggtgtaagtgttccgac  8680600                                                                               <------NtERF2                                                                              <---------MYB46(3)                                                                              ----------->GT1                                                                              --------->LBD16                                                                             <---------ANAC46                                                                            <---------LBD16                                                                          <-------PIF5                                                                          <---------DEAR3(1)                                                                          ------->PIF5                                                                          --------->DEAR3(1)                                                                          --------->ATERF1(2)           <---------ANAC46                                              --------->ATERF1(1)     ---------->DOF2                                                     <---------LBD16  --------->REM1(2)    <----------CDC5                            --------->ANAC58          --------->DEAR3(2)<--------P ---------DOF5.7(2)                            --------->ANAC58         ------->TEIL     --------->ALFIN1 ------->WRKY12                     <---------GLK1(2)                 <-------TEIL ---------->DOF2 ------->WRKY38(1)      <---------ANAC46      <---------LBD16         <---------ABI4(2)<---------ANAC58 --->HVH21 ----------->GT1         <------ZmHOX2a(1)     --------->AtMYB61<---------ATERF1(2) ------>DOF5.7(2)       ----------->GT1      ------->GAMYB         --------->At4g35610 <---------ANAC58 --------->HVH21       <------ZmHOX2a(1)    --------->MYB46(3)     <---------At4g35610 <---------ANAC46   gttgacgcagagcgcgtgaatatgaggagtgaaatcaggaatctcaacgacggaatggaccatcgctggagatgcaccggcggataaaagcgtgttggca  8680700                                                                                   --------->ZAT2                                                             <---------MYB52(1)    <---------At4g35610                                                            <-------GAMYB          <---------GLK1(1)                                                            ==========================MYC_MYB                                                           <---------DEAR3(2)    <------NtERF2                                                           <---------MYB46(3)   --------->LBD16                                                       <---------DEAR3(1)     <---------LBD16                                                      --------->SPL7        --------->ANAC58                                                     --------->SPL1(1)      --------->ANAC46                                                    <---------SPL7          --------->TGA1a                                                    <---------SPL1(2)       --------->O2                                                    <---------RAP2.6(3)     --------->ANAC58                                                   <---------ANAC46    <---------ZAT18                                                   <---------ANAC58  <---------At4g35610                                                   <---------ANAC58  --------->At4g35610                                             --------->MYB52(2)      --------->PCF2<---------ZAT2         --------->HSFB2a(2)                 <-----------RAV1(1)<---------ANAC55(2)--------->At4g35610         <---------HSFB2a(2)               ===========================================MYC_MYB    <-------TEIL                           <-------GAMYB  <---------ANAC46<---------ALFIN1   <------ZmHOX2a(2)                    <------NtERF2<---------SPL1(1) --------->ZAT18 <---------ALFIN1  --------->ARR11(3)           <---------ZAT14   <------------------SPL14<---------REM1(2)  <---------ARR14(2)           --------->ZAT14  ------------------>SPL14<---------ALFIN1  --------->ARR14(2)         --------->ANAC46<---------MYB46(3) --------->ANAC55(2)--------->GLK1(1)  <---------ARR11(3)      --------->ZAT18 <---------MYB46(3)--------->At5g28300--------->DEAR3(1)  --------->AGP1    <------MYB46(1)   <---------DEAR3(1)  <---------DEAR3(1)<---------TGA1a --------->GLK1(1)  <------MYB83    --------->MYB52(1)--------->SPL1(2)--------->RAP2.3(3)   acgagatccatcgagacgaagttggtgatgcactgaacaagcggcgattgttgccgtacggcggttaagtgagcccacacgccggagctccactcgtttt  8680800                                                        --------->AHL20(2)                                            --------->ANAC55(2)                                            <---------ANAC55(2)                                            --------->ANAC58                                            --------->ANAC58                                   <---------ANAC58     <-----------TBP                                   <---------ANAC46    --------->AHL20(1)  <------MYB46(1)                                 <---------ANAC46      <---------AHL20(1)  <------MYB83                               <---------ANAC58--------->ARR14(2)         <---------AtMYB61                               <---------ANAC58<---------ARR14(2)         --------->MYB59                               *TSS<---------ANAC58   --------->AHL20(2)<---------MYB52(1)      -----       <---------YAB1   <-----------GT1    <---------LBD16       --------->CCA1(2)             <----- <---------YAB1      <----------DOF2      --------->MYB52(1)  --------->ANAC46                <------   gttctgattttgattccattctgctttaaccagtcgtgcgtaaatcacggattcaaatatatataagaaacacggtttggtctagattagattaaaaccg  8680900                                                                                     --------->MYB46(3)                                                                                     <---------MYB52(2)     <-----------GT1                                 <----------DOF2              <----------ID1 <-----------TBP              ------->TEIL         --------->ZAT2    <---------HSFB2a(2) ---->LBD16                <---------ATHB12        <---------At4g35610     ----------->RAV1(1) ----LBD16             ------------>CBF            --------->At4g35610 --------->REM1(1)           <- ---LBD16              --------->MYB46(3)          <---------ZAT2    --------->HSFB2a(2)        -----   ggattttataccggtttagacttcaaccaatgaaccgagtcgtttcatttctcagctttgagatggtttttctacaacaacaatggaacaaacactctca  8681000                                                   --------->DAG2                                                   <---------------AtSPL3 <---------ANAC58                                        <-------TEIL                      <---------ANAC46     ----------->GT1                   --------->CCA1(2)             <---------ANAC58    <---------TOE1(2)                 --------->ARR11(1)   --------->DOF5.7(2)    <---------TOE2(2)             ---------->DOF2 ---------->DOF2    <---------ANAC58   <-----------RAV1(2)   <XXXXXXXXXXXXXXXXXXXXMIR2938      <---------MYB52(1)                     --- ----------HVH21         <---------GLK1(1)     --------->YAB1<---------ARR11(3)         <-----------GT1 ----->DOF2          --------->ALFIN1 --------->ARR11(3)  <-------GAMYB   <---------ANAC58--------->ZAT6   aagtcacaggttacaatgtagaagtggaactctctctaaagatacagaagcataaagtaccgttatcttcttcgtgtcttggacaactatttactctatt  8681100            --------->ARR14(2)            <---------ARR11(3)            <---------ARR14(2)            --------->ARR11(3)            <-----------ARR10   --------->ANAC58           =================HOX2a_HOX2a           <------ZmHOX2a(1)    --------->ANAC58       --------->ALFIN1         --------->ANAC55(2)     <---------ANAC46           <---------ANAC55(2)    <---------DEAR3(1)       --------->ARR14(2)        <---------ATHB12                           <--   <---------ZAT14         <---------------AtSPL8     ------>MYB83                             ------   --------->ZAT14     --------->WOX13(1)          --------->MYB46(3)                        --------   --------->ZAT18   <------ZmHOX2a(2)   <---------ZAT18                                     --------  --------->ALFIN1   <---------ATHB12<---------AtMYB61------>MYB46(1)            <---------CCA1(2)--- ------->DOF2<------ZmHOX2a(2) <-------TEIL   --------->YAB1       <-----------GT1           <-------   gaaagtgcggtgaggatcatccgatcattcaggtacgcattggtgcaatctgaaccaatcgtttgatagtaactcaacaattcgtctctcgagcctatcg  8681200                                                                                       --------->AtLEC2                                                                                      --------->ANAC46                                                                                  --------->AtMYB61                                                                                 <---------MYB111(2)                                                                                 --------->MYB46(3)                                                                                ------>MYB83                                                                                ------>MYB46(1)                                                                               --------->MYB55(1)                                   --------->MYB52(1)                         --------->MYB46(3)                                 <-----------RAV1(2)                          <---------MYB55(2)                   --------->GLK1(1) --------->ANAC58                         <---------MYB46(2)    --------->ARR14(2)        --------->ANAC58                                <---------MYB111(1)    <---------ARR14(2)        --------->ANAC58                                --------->AtMYB61 -------ARR14(2)   <---------GLK1(1) --------->ANAC58                         --------->DEAR3(1) --->YAB1 ------>NtERF2 --------->LBD16                                ------>ZmHOX2a(1) ->MYB52(1)       <---------ARR14(2) --------->ANAC55(1)         --------->GLK1(2)------->GAMYB ->ARR14(2)       --------->ARR14(2) --------->ANAC46           <---------GLK1(2)<---------MYB55(2) ------>ARR14(2) <------ZmHOX2a(1)----------->HVH21       <-----------GT1     <---------MYB111(2) --ARR14(2)  <------NtERF2<-----------HVH21    --------->ZAT2--------->HSFB2a(2)-------->P          <   gaaccagaaccgggccgaaggatacccgagtcaccccagacggaacacgagctacggtttttactagaatctcctaaacaccaaccaccaggcacaactt  8681300  Previous    Next  AGI:  At3g24030.1    Description:  hydroxyethylthiazole kinase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO71555.1); contains InterPro domain Hydroxyethylthiazole kinase, monofunctional; (InterPro:IPR011144); contains InterPro domain Hydroxyethylthiazole kinase; (InterPro:IPR000417) Range:  from: 8679559    to: 8680831    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g24040.1    Description:  glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein. similar to glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] (TAIR:AT5G39990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71556.1); contains InterPro domain Glycosyl transferase, family 14; (InterPro:IPR003406) Range:  from: 8680884    to: 8683296    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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