Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->AtMYB61          <---------ALFIN1         -------->P         ------>MYB46(1)                    ------->TEIL                                         <---         ------>MYB83              --------->YAB1                                        <---------DAG2       --------->AtMYB61          <---------YAB1                                         <----------DOF2      --------->MYB46(3)        --------->TOE2(3)                    --------->ZAT6   <-----------GT1      <---------MYB55(2)        --------->YAB1                  <------ZmHOX2a(1)--------->ARR11(3)      --------->DEAR3(2)      <---------TOE2(3)             <---------MYB52(1)   <---------ARR11(3)   taactcgaaccaacacctaaaccatttgttctaacgataatagacgaacgtattagagactcgttaggaaaacactacttgtatatattcacttttacat  8641200                                                                  ---------->DOF2                                                        ------->TEIL                                                        <-------TEIL                               --------->ANAC55(2)      <---------TOE1(2)                             <-----------GT1            --------->SPL7                         <---------AHL20(2)             <---------TOE2(2)                         --------->AHL20(2)           --------->TOE2(2)                        <---------AHL20(2)          <---------------AtSPL3                     <-----                     <---------AHL20(2)             --------------->AtSPL3                 <---------At5g28300                     --------->AHL20(2)             --------------->AtSPL8          --------->ZAT6                 <---------AHL20(2)           <---------YAB1    <---------YAB1     --------->ZAT18 <-                <---------AHL20(1)  <---------MYB52(2)<---------SPL7               <---------ZAT18 <-               <---------CCA1(2)    --------->MYB46(3)--------->TOE1(2)        <---------HSFB2a(2) <- ----TEIL --------->TOE2(3)  <---------AHL20(2)     <---------------AtSPL8     --------->HSFB2a(2) <-   acatatttgtttccttcatatatttatttatttacataacaaaccaatatgaaaaacgtacgtttcatgaaagagaacgttgtagaacactatcaccgtt  8641300                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)                                                                    --------->AHL20(1)              <---------ANAC58                                  --------->AHL20(2)                  <         ---------->DOF2                                        <---------AHL20(2)                  < ----MYB52(1) <---------ANAC58                                 --------->AHL20(2)                   - --------AtLEC2                                              --------->YAB1                 --------- --------ANAC58                                             <---------ATHB51                ------->GAMYB --------ANAC46  <-----------ARR10         <---------ICU4 --------->YAB1                   --------->MYB46(3) --------ANAC58 <---------CCA1(2)         --------->ICU4 --------->ZAT6              --------->MYB59-   tgcttgtaagaaaaaggcttatctcacctataaactcgtgagtcatatttatactcttaacaataataaataaaataaaactctattttggtaaccacaa  8641400                                                                                      ------->GAMYB                                                                                      ===============                                                                                    <---------At5g28300                                                          --------->ORA47(1)       <-----------GT1                           <---------HSFB2a(2)           --------->DEAR3(1)     ------>ZmHOX2a(2)               --------->DAG2         --------->ANAC46  --------->DEAR3(2)     <------ZmHOX2a(2)   --------->GLK1(2)       --------->HSFB2a(2)         ------>NtERF2          --------->AGP1 ---------ARR11(3)       <---------At4g35610          <---------ALFIN1        <---------AGP1<-------- ---------AHL20(1)       <---------ZAT2             ------->GAMYB             <---------ARR11(3) -------->ARR11(3)       --------->ZAT2           -------->P                  --------->ARR11(3)    - >TOE2(3)     ---------->DOF2 ---------->DOF2 --------->At4g35610            <---------CCA1(2)      - -------->AHL20(1)       --------->At4g35610  <---------At4g35610       <----------DOF2     =========   aaaatattctgaggctaaaagcgcgtctgctggaaagttcacgcgctctgctaaccccaccgtccattctgactcttttagatcttaaccgtgtctttat  8641500                     ----------->HVH21                  -------->ABF1                  ------->MYC2                  ------->MYC3                  <-------MYC3                  <-------MYC2                  <-------MYC4                  ------->MYC4                 --------->ANAC46                 <---------ANAC55(2)                 --------->ANAC55(2)                 --------->TGA1a                 <---------TGA1a      <---------TOE2(2)         --------->ANAC55(2)                         *TSS      <---------TOE1(2)     <-----------HVH21          --------->AHL20(2)  <---------ANAC58 ==========================MYC_MYB                     <---------AHL20(2)  <---------ANAC58 --DOF2          <---------O2   <---------ANAC55(2)  <---------YAB1------>ZmHOX2a(1)      <---------ARR11(3) -------->ANAC46 --------->O2<------ZmHOX2a(2)   --------->TOE2(3) <----------DOF2        <---------- -------->bZIP60(2) <-----------HVH21     --------->YAB1    --------->TOE2(3)        --------->AHL20(2) ==========================bZIP_DOF      ----------->TBP <-----------GT1 <---------YAB1   --------->ARR11(3)   ccacatcatacgtttatacacgtgtcacacgatcacctattctataaaaaacattattttaatcttatcctttttatgcttcccctataaattatcttct  8641600                             --------->ANAC46                           --------->ANAC58                           --------->ANAC58                                               <---------GLK1(2)                       <-----------HVH21                                      --------->GLK1(2)              ------>ZmHOX2a(2)                                              --------->KAN4(2)              =============HOX2a_HOX2a                                       <---------ARR14(2)             ==============HOX2a_HOX2a                                      <---------KAN4(1)             <------ZmHOX2a(2)                                              <----------TaMYB80     ------>ZmHOX2a(1)--------->ANAC46                                      <---------HSFB2a(1)     ===============HOX2a_HOX2a                                             --------->HSFB2a(1)  ===================HOX2a_HOX2a                                            --------->KAN4(1)  ------>ZmHOX2a(1) ------>ZmHOX2a(1)                                      ---------->TaMYB80  ==================HOX2a_HOX2a                                            <---------KAN4(2)    ----- -GT1================HOX2a_HOX2a                                     ---------->DOF2   <------ZmHOX2a(2)   cttcctccttctccgatctctcctccgtcacacaaaacttccgatttcaaaaaaacaatttgaaatttgtcaaaaggaatattctgacgatcgattcttg  8641700                                                                  --------->ARR14(2)                                                                  <---------ARR14(2)                                                                 <------NtERF2    ----------->GT1                                                                --------->LBD16   --------->LBD16                                                     ============================HOX2a_HOX2a                   ----------->GT1                   <------ZmHOX2a(1)    <------ZmHOX2a(2)             <---------ARR14(2)                 <---------At4g35610<---------GLK1(1)          <---------ANAC58                      --------->At4g35610--------->GLK1(1)     ----------->HVH21          <---------ANAC58           <---------AHL20(2)     --------->ANAC46  --------->ARR14(2)          <---------ANAC46   <---------ANAC46   --------->ZAT2 --------->ANAC46 <---------LBD16<----- ---->ATHB12 --------->REM1(2)  <----------DOF2 <---------ZAT2<---------LBD16 <---------ARR14(2) <---   attcgttttctcgcgtatagagagaaaaatggcgcttaatttatcgcatcagctaggagtactcgccggaactccgatcaaatccggtgaaatgacagat  8641800                                                                                      <-----------HVH21                                                                                     --------->WOX13(1)                                                                                    <-------TEIL                                                                                  --------->AGP1                                                                                  <---------ARR14(2)                                               --------->ANAC58                   --------->ARR14(2)                                               --------->ANAC58           --------->ANAC55(2)                                     <---------bZIP60(1)                  --------->ANAC58  ------>NtERF2                                   --------->YAB1                         --------->ANAC58  ---------                      --------->AtMYB61   --------->ANAC58                --------->ANAC55(1)                     --------->MYB46(3)   --------->ANAC58                <---------ANAC55(2) -------                   <---------ALFIN1<---------ICU4      ------->TEIL       --------->ANAC46 --------->DEAR3(1)                  --------->MYB46(3) --------->bZIP60(1)                 <---------LBD16<---------ALFIN1 ----GLK1(2)    <-----------GT1   --------->ICU4    <---------ATHB12    --------->MYB52(1)--------->MYB46(3) ----TEIL<---------YAB1  <---------DEAR3(1)  ---------->DOF2       --------->ANAC46<------ZmHOX2a(2)   tcatcgttgttatcaatttcaccaccatcggcgagaatgatgacacctaaagcaatgaatcgaaactacaaggctcacggaacagatccatcaccgccga  8641900                               <-----------HVH21                              <-----------RAV1(1)                              ----------->HVH21                            <------ZmHOX2a(2)                           <---------ARR11(3)                           --------->ARR14(2)                           <---------ARR14(2)                           --------->GLK1(2)                       <---------LBD16                      --------->ALFIN1                     ------->MYC3                     <-------MYC2      <---------ANAC55(1)                     ------->MYC2      <---------ANAC58                     <-------PIF5     <-----------------------TaNAC69(2)                     <-------MYC3     <------NtERF2                     <-------MYC4    ------>NtERF2                     ------->PIF5   <---------DEAR3(1)                     ------->PIF4 <---------DEAR3(2)                     ------->MYC4<---------At1g77200                     <-------PIF4<---------DEAR4(1)                    <---------TGA1a --------->ALFIN1                    --------->ANAC55(2)<---------bZIP60(2)                    --------->TGA1a<-------GAMYB                    <---------ANAC55(2)<---------ANAC46                    --------->O2 <---------DREB2C(2)                    <---------O2 <---------MYB46(3)                    =======================MYC_MYB                    ===================================bZIP_DOF                    ===================================bZIP_DOF                   ------------>OsbHLH66                  <---------ALFIN1<---------MYB46(3)                  <------------OsbHLH66<---------ANAC58                ----------->RAV1(1)--------->ATERF1(1)               ----------->HVH21 <---------DEAR3(1)      --------->ALFIN1              <-------TEIL<---------ARR14(1)          <---------DEAR3(1)           <---------ANAC58<-----------ARR10         <---------LBD16  ----------------->AGL3  <---------CCA1(2) ---------->DOF2 >ABI4(1)  <---------ANAC58<---------AGP1 --------->REM1(2) -->DEAR3(1) --------->ALFIN1------>ZmHOX2a(2)   <----------DOF2         <---------PCF5   tgagtccaattttaggtgcgacacgtgcggatctgtcggtggcgtgtaaagctttcgcggtggagaatggaatcgggaccattgaagaacagagaacgta  8642000                                             ------>ZmHOX2a(1)                                    <---------AtMYB61             <------MYB46(1)       <------ZmHOX2a(1)             <------MYB83        --------->ALFIN1                <----------DOF2            <---------AtMYB61   <------ZmHOX2a(1)              ------>NtERF2            <---------MYB46(3)--------->ALFIN1               <---------RAP2.6(2)            --------->ALFIN1 <------ZmHOX2a(1)          <---------YAB1     <-----------GT1 --------->At5g28300     <------ZmHOX2a(1)---------->DOF2  --------->ALFIN1 --------->ICU4  <---------ZAT6    -----------   tagagaaggagggattggtggaaagaaagaaggaggaggaggtgttcctgtgtttgtgatgatgccgcttgatagtgttaccatggggaacacggtgaat  8642100  Previous    Next  AGI:  At3g23920.1    Description:  BAM1/BMY7/TR-BAMY (BETA-AMYLASE 1); beta-amylase. similar to CT-BMY (BETA-AMYLASE 3, BETA-AMYLASE 8), beta-amylase [Arabidopsis thaliana] (TAIR:AT4G17090.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71375.1); similar to putative chloroplast-targeted beta-amylase [Brassica napus] (GB:AAL37169.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71514.1); contains InterPro domain Glycoside hydrolase, family 14B, plant; (InterPro:IPR001371); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 8641576    to: 8644456    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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