Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                             ========                                                                                 ===================HOX2a_HOX2a                                                                                 ------>ZmHOX2a(1)                                                                                 <----------DOF2                                                                         <---------ICU4      <------ZmHOX2a(2)         ---------->DOF2         <-----------HVH21                       --------->YAB1     <--------   <----------DOF2     --------->ANAC46            <---------ALFIN1     <---------ATHB12    --------- -----------ARR10      --------->ANAC58        --------->At4g35610    --------->WOX13(1)    --------- --------At4g35610     --------->ANAC58   --------->LBD16          --------->ANAC58         <-------- ------->At4g35610    <---------LBD16    <---------LBD16 ---------->ID1 --------->ICU4      --------- ---->TEIL--------->DAG2      --------->ZAT14  <---------At4g35610 --------->ANAC58     <---------At4g35610   cagctctttgcaaaagtaagcatacgcgcaagagcagtcactcccagggacctgcacttgtcccttgagtcgcaatcatcgtcctttctcagaagatcca  8617300                                                            ------>ZmHOX2a(2)                                                            --------->YAB1                                                     --------->ZAT2                                                     <---------ZAT2                                                     --------->At4g35610                                                <---------SPL7                                               <---------ANAC58    ---------->DOF2                            <---------ANAC46       --------->ANAC55(2) ->CCA1(2)                          <---------ANAC46 <---------At4g35610   <---------REM1(1) ==============HOX2a_HOX2a         <---------LBD16---------->DOF2     <---------ANAC55(2)          <- -ARR11(3)                       ----------->HVH21<-------TEIL    -------->HAHB4                   <- >ARR11(3)                      <-----------HVH21 --------->SPL7  --------->YAB1                   <- >AGP1  <------ZmHOX2a(1)<---------ANAC46      <---------ANAC58  --------->ICU4                   <-- -ARR14(2)               <---------ANAC58     --------------->AtSPL3 <-------TEIL  ----------->HVH21< >ARR14(2)               <---------ANAC58   ----------->HVH21    <---------YAB1  <---------At4g35610<   catagttaaaggacattacattgactagcgtttgtgtcacggagacttgacgtacagctcgatcgtaatgatacatattgtagcgctgatggagaagact  8617400          <------ZmHOX2a(2)                                                                   <------NtERF2       --------->LBD16                                                                       ------>NtERF2     <---------LBD16                                                                        ---------   <---------ALFIN1        --------->ANAC58                                              ----------->HVH21  --------->SPL7           --------->ANAC58                                 --------->ZAT2<---------WRKY18(1)  <---------ZAT14      --------->ANAC58                                     --------->ZAT14 --------- --------ANAC58        --------->ANAC58                                     <---------ZAT14 <-------- --------ANAC58        --------->ANAC46                                     --------->At4g35610 --------ANAC46     <---------SPL7                                          <---------At4g35610 ---------------------TaNAC69(2)               --------->ATHB12            --------->AtLEC2--------->RAP2.6(3) ---------ZAT18  --------->MYB52(1)           <---------YAB1      --------->ALFIN1 ----------->HVH21 ---------SPL7  ----------->HVH21    ----------->GT1          ---------->DOF2  <---------RAP2.6(3)   ggcgtacaccggatcaagatgacggacgcaaggaaactcgtgtaaaacatcattgagcttgtttgaaagtgttgtccctgcagacatgaccttgacggca  8617500                         --------->YAB1                         <---------ICU4                        <---------YAB1                   --------->GLK1(1)                   <---------GLK1(1)                            <---------At4g35610          --------->GLK1(1)                                    <---------ARR14(2)          <---------GLK1(1)                                    --------->ARR14(2)         --------->ARR14(2)                                 <------MYB46(1)      <---------ANAC46  --------->ICU4                      <------MYB83     <---------LBD16  --------->YAB1                       --------->MYB46(2)   ----------->HVH21--------->ARR11(3)                     --------->MYB59 >ANAC46 <---------ARR14(2)<---------YAB1                <---------MYB52(1) >bZIP60(1)       --------->ARR11(3)                 <-------TEIL                          --------->YAB1 -RAP2.6(2)       <---------ARR11(3)                 <---------ZAT14        --------->MYB52(1)   tacttttgacggatatcggagatatcatcatgacaaacacggtctggtatcagggtacagtttggtatctgatactcaaaacggatggctctatcaaaat  8617600                                                                           <---------AHL20(2)                                                               --------->HSFC1(2)                   <                                                               <---------HSFC1(2)                  --                 --------->ZAT14                               --------->MYB46(3)                  --                 <---------ZAT14                               --------->HSFB2a(1)        <----------               --------->ANAC46                               ------->TEIL<---------AHL20(2)       --             <---------ALFIN1                              <---------MYB52(2)      ---------->ID1  --             --------->AtMYB61                             --------->MYB46(3)<---------YAB1   -------            --------->MYB46(3)                        --------->HSFB2a(2) --------->AHL20(1)  -------          <---------ARR14(2)                          <---------HSFB2a(2) <---------AHL20(1)  <------          --------->ARR14(2)  XXXXXXXXXXXXXXXXXXXX>MIR835-5P------->GAMYB --------->AHL20(2)  <------   ccaattcagtcggaaccacagcacttatcttcttgaatatgttcttctccattgttccacaacgaaccatcttgaatttattcttgtccatttttctgca  8617700                                                           --------->ANAC58                                                           --------->ANAC58                                                  <---------YAB1                                               ------>ZmHOX2a(1)                                              --------->TOE2(3)    --------->MYB46(3)                       ------>ZmHOX2a(2)    ------------>CBF                        <------ZmHOX2a(2) ---------MYB52(2)                         <---------GLK1(2)------------>CBF ------->ANAC46                            --------->ARR11(3) ------->ANAC55(1)                         <---------ARR14(2) -GT1   <---------ATHB12                   --------->ARR14(2) ------->ANAC58                     <-----------TBP --------->WOX13(1)       ------------>CBF ------->ANAC58       ==============================HOX2a_HOX2a             --------->ANAC46 -->ZAT18             <------ZmHOX2a(1)---------->DOF2 --------->YAB1       --------->ANAC58      <-- -->ZAT14             =============================HOX2a_HOX2a              --------->ANAC58 -------- ---ZAT14--------->AHL20(2)       <----------DOF2 ------------>CBF   -------->P              -------- ---ZAT18--------->YAB1   <-----------GT1  <---------ARR11(3)    --------->TOE2(3)      <---------ATHB12   caagtaaccaataaaaaaaacacaggaattacaactctttttaaagatccttatcaatcgtatgcaatctcaacccctaagcaatttctaatcacacatc  8617800                                                                                      ------------>CBF                                                                                <<<<<<<<<ARR1                                                                                <<<<<<<<<ARR2                                                                            <---------ATHB12                                                                            ------------>CBF                                                                           --------->ANAC46                                                                       --------->CCA1(2)                                                                       <------ZmHOX2a(2)                                                                      --------->ARR11(3)                                                    --------->AHL20(2)--------->ARR14(2)                          <---------MYB52(1)    <---------AHL20(2)    <---------ARR11(3)   ---------->DOF2   --------->ARR11(3)     <---------RVE1(1)         --------->AGP1 --------->ANAC58 -------ANAC55(2)    <---------ARR11(3)     <---------CCA1(1)   <---------TOE2(3)    --------->ANAC58 ->ANAC46        ---------->DOF2--------->WOX13(1)  <---------AHL20(2)<---------ARR14(2)   --------->TOE2(3) ->bZIP60(2) --------->YAB1   ------------>CBF  --------->AHL20(2)---------->DOF2--------->YAB1------   acataaaaagactaaacataaaagatttgttagtcaatctaaggcgatatttttttaatttgttttaagaaagatccaaacaatcgtatgcaatctcaac  8617900                                                                                                 <---                                  ---------->DOF2                    --------->ARR11(3)          ----                           <-----------HVH21                         <---------ARR11(3)      <-------                          --------->bZIP60(2)               ------>MYB46(1)                <------NtERF2   ------------>CBF       --------->ANAC46                  ------>MYB83                 <---------RAP2.6(2)  --------->ANAC58      --------->ANAC46                  <---------MYB59                <---------DEAR3(1)  --------->ANAC46     ------->GAMYB                    <---------At5g28300             --------->RAP2.6(3)  --------->ANAC58   --------->ZAT14                   <-----------GT1    <---------MYB52(1) <------- -->P              --------->ANAC46         <---------MYB52(1)   ---------->DOF2--------->WOX13(1)   ccctaagcaatttctaatgacacaacacacatcacagaaagagaccgtgagttttttttaccgaacacaaagatttgttagtcaatctaagtcggcttta  8618000                                                                               --------->MYB52(1)                                                                               ------>MYB83                                                                               ------>MYB46(1)                                                                             <---------MYB59                                                                             <---------MYB111(1)                                                                             <---------MYB111(2)                                                                         --------->TOE1(2)                                                                         --------->TOE2(2)                                                          <-----------------------TaNAC69(2)                                      --------->ARR14(2)  <-------TEIL   <---------MYB111(1)     --------->ARR11(3)               <---------ARR14(2) <------ZmHOX2a(2)   <---------MYB46(2)     --------->GLK1(2)               --------->ALFIN1   <---------ARR11(3) ------>MYB46(1)     <---------ARR11(3)            <---------ANAC46     <---------ARR14(2) -------->P           <---- -------ID1                        <---------ANAC58     --------->ARR14(2) ------>MYB83         ----- ----->ANAC46                      <---------ANAC58     --------->ARR11(3)--------->MYB55(1)    ----- --DAG2                    ---------->DOF2              --------->AGP1   <---------MYB59       <----- ---DOF2                 ---------->DOF2    <-----------HVH21--------->AtLEC2--------->MYB46(3)------   cgacaaaaatctaggtcgaacttgtacaaaagagcgagcgtgttcgcatcaggtctaagatccatacaaacaaaacctaccaaacagttgggagagagat  8618100           <---------ANAC58           <---------ANAC58       <---------ANAC58           --------->TOE1(3)       <---------ANAC58           --------->TOE2(3)     --------->ARR11(3)    --------->LBD16     <---------ARR11(3)  <---------LBD16 ---------->DOF2         --------->LBD16 -----GLK1(1)           <---------ANAC58                                                         ---- ---->CCA1(2)           <---------ANAC46                                            --------->ARR11(3) ---->GLK1(1)           <---------ANAC58    <---------DAG2                          <---------ARR11(3) ----ARR11(3)       <---------ANAC58        <----------DOF2                        <---------GLK1(1) --->ARR11(3)       <---------ANAC58 --------->REM1(1)  <----------DOF2  <-------TEIL     <----------DOF2   atccaaagagcttgcttaagagacttgcgcggaaaaccttcaccagctttttatatgtctttacataaactagggttcacaatcgatatctcctttctct  8618200  Previous    Next  AGI:  At3g23860.1    Description:  GTP-binding protein-related. similar to GTP-binding protein-related [Arabidopsis thaliana] (TAIR:AT1G10300.1); similar to GTP-binding protein-related [Arabidopsis thaliana] (TAIR:AT1G50920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21916.1); contains domain gb def: Gb|AAD32880.1 (PTHR11702:SF2); contains domain DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED (PTHR11702) Range:  from: 8616960    to: 8617652    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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