Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <-------GAMYB                                                                 <-----------RAV1(1)            <-----------GT1                                      --------->MYB52(2)            ------->TEIL                                         <---------MYB46(3)               ---         <---------REM1(1)                                <---------MYB52(1)                    -----   --------->YAB1                                   --------->ARR14(2)     --------->ANAC58     ----- --------->ANAC58                                   --------->ARR11(3)     --------->ANAC58     ----- --------->ANAC58          <---------At4g35610      <---------ARR14(2)   ---------->DOF2     <------- --------->AtLEC2          --------->At4g35610      <---------ARR11(3)<---------HSFB2a(2)  <---------ETT(2)   gccaagcatagatgtaactggaccatttgagctctgagaaaccccttgtctcaagataccgctaagtttgttgcagaaagccatttctaaatgtctacac  8607700                                                <---------WOX13(1)                                              -------->HAHB4                                              --------->ATHB12                                             <---------YAB1 ------>ANAC46                               --------->ICU4 ---->ANAC58                          ----------->GT1                                            ---- ---->ANAC58   <---------ATHB12    --------->ARR11(3)                       <----------DOF2     <---- ---->ANAC46 --------->WOX13(1)    <---------ARR11(3)            ---------->DOF2            --------- --REM1(2)  --------->MYB46(3)    <---------CCA1(2)            <---------YAB1    --------->WOX13(1)   acaaaactaaatcaacaatcaattccattactctatatatctgtaaaatgattaacaacaatgctattaaagtcatttcttttcaattagaccacaaaga  8607800                                                                                                  ---                                                                                                  ---                 --------->ANAC58                                                           <--------      --------->TOE2(3)                                                               <---------ARR11(1)      --------->TOE1(3)                   --------->ANAC46                            --------->ARR14(2)   <---------ALFIN1                     --------->ANAC46                              <-----------ARR10 ----->GLK1(2)   --------->ANAC46       --------->YAB1                                <---------ARR11(3) -----GLK1(2)    --------->ANAC58  --------->At4g35610                               <---------CCA1(2) ->DOF2        ---------->DOF2     <---------At4g35610                          <-----------GT1   ---   atcccaaaccctaaaatcaaagccatttctaaatgtctgcaaacacaacatgtaaacccagaagactaaaatcaattccatttctccatatctaatcaac  8607900          --------->YAB1          <--------HAHB4          <---------ICU4          --------->ATHB12         --------->ICU4       --------->YAB1       <---------ICU4      --------->ICU4                    --------->ANAC58                                 --------->HSFB2a(2)    --------->YAB1                      --------->ANAC58                                 <---------HSFB2a(2)   <---------YAB1                     ---------->DOF2                                --------->TOE1(2) ------>ANAC46             <------ZmHOX2a(2)                                         --------->TOE2(3) ------>ANAC58            --------->ARR11(3)               ---------->DOF2 <---------REM1(1) -ATHB12 <---------YAB1   <---------ARR11(3)      ---------->DOF2   ---------->DOF2  --------->TOE1(3) ------>ANAC58  <----------DOF2      --------->AtMYB61   <---------YAB1  --------->CCA1(2)          -   aagctataataatcatttctttgcaatagatcatcgaaaccaaagccatttctaaagctatgaaagacattaaagagatgaagcaaaccttagagaaggg  8608000                                                                                                -----                                                                                                <----                                                                                                <----                                                                                      <-----------TBP                                                                ---------->DOF2       <---------AHL20(2)          <---------TOE2(3)                                   *TSS                    --------->AHL20(2)          <---------TOE1(3)            ---------->DOF2      <----------ID1          <-----------TBP ---------->GT1          --------->MYB52(1)            <------ZmHOX2a(1)       <---------TOE2(3)-----   aatggcgaaattagggttttagcgaagtaacagtgagtgagaaaagaggcagtgagaggatgaagacaaagagtagggtttaagggatttatatactgag  8608100                                                    <---------ANAC46                                             <------MYB46(1)  <---------GLK1(2)                          <------MYB83 ---->ZAT2                                   <---------ANAC46 -----At4g35610                      <-----------RAV1(1)       --------->ZAT14 -----ZAT2                         --------->At4g35610         <---------ZAT14 ---->At4g35610                    ----------->RAV1(2)   <-----------GT1   ctcagaaactctcatttttgttttgctcaaactaatcacctgtggctaggtgtatcgtattactgtatactaccgtagttgtccaatagaattgagtaat  8608200                   --------->DAG2                  ---------->DOF2                    <---------REM1(1)  --------->LBD16            <-          ------->GAMYB                         --------->At4g35610    --------->LBD16             --         <---------ALFIN1                       <---------At4g35610   <---------HSFB2a(2)          <-        <---------REM1(2)                      ------->TEIL           <---------LBD16            <---      <---------WRKY38(1)       ----------------->AGL3                --------->HSFB2a(2)       -----   gagagaagtcaacacactggaaaagcgcaagtgtatcaaatatagaatgtagctgatgtagagtatttagttcccggacttctctctaacttgttcaacc  8608300                <---------ANAC58                                                                 <---                <---------ANAC58                                                                 ----           <-------MYC3                                                                         <----           ------->MYC3                                                                         -----          <---------O2                 --------->AHL20(2)                                  <------MYB83          --------->O2       --------->At4g35610                                           ----------        <---------ALFIN1     --------->ZAT2    --------->ARR11(3)                          <------MYB46(1)      ------>NtERF2          ----------->RAV1(2)                                          --------->MYB46(2) --------MYB46(3)            <---------ZAT2    <---------ARR11(3)                         <---------MYB46(3) ------->MYB52(2)            <---------At4g35610       ---------->DOF2   ---------->DOF2 <--------P - ----------RAV1(1)    --------->AHL20(2)<---------AHL20(2)             <---------HSFB2a(2)--------->MYB59 -------DOF2<---------MYB52(1)       --------->TOE2(3)---------->DOF2  --------->HSFB2a(2)--------->MYB111(2) ---->TOE2(3)   <---------ANAC46--------->At4g35610  ------>ZmHOX2a(1) <-----------RAV1(2)--------->MYB111(1)   tttgttgccaccacgttggcttgattatatcagctgcttcattaaataagatgtcctaaaggcccaatatgtcccagaagcccattacaaggttggtaat  8608400                                                                                               ------                                       <---------ARR14(2)                                  --------->AHL20(1)                                    <---------ANAC46                                       <---------AHL20(2)                   <---------LBD16  <---------ANAC58                                       <---------AHL20(1) ------ICU4       --------->ALFIN1  <---------ANAC58                                       --------->AHL20(2) ----->YAB1 <-------MYC3            <---------ANAC55(2)                           <----------ID1 -----YAB1  ------->MYC3            ----------->GT1     <---------ARR11(3)        ----------->GT1 ---->ICU4  ------->MYC2     ---------->DOF2            --------->ARR11(3)       ----------->GT1 ->GT1      <-------MYC2 <-------TEIL  --------->ARR14(2)  <----------DOF2       <---------TOE2(3) -------->YAB1  <---------ANAC46   <-------TEIL  <---------AHL20(2)            ---------->DOF2<------   aataagaagaggcatgtggtttgggggttcaaaaagatgcgtatatagtattttatagtatcttttttttttttttttttgtaaaggaaaaaatttatta  8608500                                                                            --------->GLK1(2)                                                                           <---------ARR11(3)                                                                           <---------GLK1(2)                                                   --------->YAB1          <---------ARR14(2)    <---                                                --------->YAB1             --------->ARR14(2)    ----                                              <---------KAN4(2)          <---------YAB1          ---- <-----------ARR10                         <---------TOE1(3)          <---------YAB1             ---- <---------ARR11(3)                 --------->ANAC55(2)             <---------ICU4             <----- --------->ARR11(3)                 <---------ANAC55(2)            --------->ICU4           <-------- --->YAB1                           <---------ANAC55(1)      --------->ANAC58               --------- ---YAB1                            <---------ANAC46         --------->ANAC58               <--------   tagtatcttacttatatgctctcaacgatttctacattatgtgttagggataatcatattagcaagcccattatgaagattctaacaagtagtttaggta  8608600  Previous    Next  AGI:  At3g23830.1    Description:  GR-RBP4/GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding / single-stranded DNA binding. similar to ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2), RNA binding / double-stranded DNA binding / single-stranded DNA binding [Arabidopsis thaliana] (TAIR:AT4G13850.1); similar to ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT4G13850.3); similar to ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2), RNA binding [Arabidopsis thaliana] (TAIR:AT4G13850.2); similar to glycine-rich RNA-binding protein PsGRBP [Pisum sativum] (GB:AAB71417.1); contains InterPro domain RNA recognition motif, glycine rich p Range:  from: 8606484    to: 8608062    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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