Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   ---------->DOF2                            --------->CCA1(2)                                  --------->ARR11(3)                           --------->ARR14(2)                     <---------CCA1(2)      --------->ANAC46                           <---------ARR14(2)        --------->YAB1<-----------GT1       --------->ANAC58                      <---------ANAC58              <------ZmHOX2a(2)      ---------->DOF2                      <---------ANAC46             --------->ARR11(3) <---------------AGL15         <                      <---------ANAC58    <---------DAG2         --------->ARR14(2)      <----------ID1         ---------->DOF2 ----------->GT1  <----------DOF2  --------->ANAC46--------->YAB1--------->ANAC58   --------->YAB1--------->GLK1(2) ----------->GT1 <---------ARR11(3) --------------->AGL15        --   caaaaacataataaaggagaatttgagtggatacaagttgtaaacttttttaagatcataaacaccatatatccctataaagataaagaatacgacaaac  8603100           ------>ZmHOX2a(1)    <----------DOF2   ===============HOX2a_HOX2a                                       <---------WRKY18(1)   ------>ZmHOX2a(2)                                            <------ZmHOX2a(2)  ================HOX2a_HOX2a                                  --------->AGP1  <------ZmHOX2a(2)                                            <---------AGP1  <---------RVE1(1)                                            <---------ARR14(2) <---------AGP1                                                --------->ARR14(2) --------->AGP1                   ----------->GT1              <---------ARR11(3)                 <-- <---------ARR11(3)   <---------ARR11(3)                 <---------AHL20(2)                <--------- --------->ARR11(3)   --------->ARR11(3)                --------->AHL20(2)  --------->AHL20(2)   ---- ---------CCA1(2)    --------->GLK1(1)            ----------->GT1------>ZmHOX2a(2)   ---------->DOF2 --------->ARR10--------->O2   --------->ICU4 <---------YAB1   --------->ARR11(3) <---------ANAC55(2)   ttagatctttttcctccaacgtgatatctagtagtaatgaaaaaacacatgatagttaataaatagatcttgaccctataaaataagtaaagactttttt  8603200                                                                                                <----                                                                                                <----                                                                                                <----                                                                                   <---------HSFC1(2)                                                                                   <---------HSFB2a(1)                                                                                   --------->HSFC1(2)                                                                                   --------->HSFB2a(1)                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                 --------->ARR14(2)                                                                                 <---------ARR14(2)                                                                                 --------->ARR11(3)                                                                      <---------MYB59------>ZmHOX2a(1)        --------->DAG2                                               ----------------->AGL1     <---- -------TOE2(3)                                  --------->ZAT6<---------ANAC46  <---------ARR11(3) -DOF2 ---------->DOF2                  <---------KAN4(2) <-----------RAV1(1)   <---------GLK1(1) --- ------>DOF2--------->ZAT14       <---------ATHB12   <-----------------AGL1  <---------LBD16   <-----   aaagatagcaaaagtaaactctgtaagaagtctccaatggagaacaatctaactcttccaatgtggcataggcctaatttggggatccttcttatatttc  8603300                                          --------->ATHB51                                          <--------HAHB4                                         --------->ICU4               <---------YAB1                                         <---------YAB1              --------->AHL20(2)                                       --------->YAB1               <--------HAHB4                                       <---------ICU4               <---------ICU4 -----ANAC46                           <--------HAHB4              --------->ICU4 -----LBD16                   <---------bZIP60(1)                  <---------YAB1 -----ANAC58                  --------->bZIP60(1)  --------->ZAT6--------->YAB1 -----ANAC58                <---------DDF1<---------ICU4 <----------DOF2                   <--------- -------->GT1            --------->MYB52(1) <---------YAB1    <----------DOF2  ----------->GT1     -- ----LBD16      ----------->GT1       <---------YAB1     <---------DAG2--------->YAB1 --------->AHL20(2)   gggtaaaatcacacactcatgtaaaaataccgacatcactatcattattacaaacagtacttttctttcattattatagtttagaaaaaaaaataactcg  8603400               <---------YAB1              <----------DOF2              <---------------AGL15              --------------->AGL15             <-----------------AG             <-----------------AGL2                                              --------->KAN4(2)             <-----------------AGL3                                             <---------HSFB2a(1)           --------->ARR11(3)                                                   ------>ZmHOX2a(2)           <---------AHL20(1)                                                   --------->HSFB2a(1)           <---------ARR11(3)                                                 <---------ARR14(2)          --------->RVE1(1)                                                   --------->ARR14(2)          --------->CCA1(1)           <---------ETT(1)                        <---------ARR11(3)       <---------AHL20(2)             --------->LBD16                         --------->ARR11(3)   <---------AHL20(2)             <-----------GT1  *TSS                 --------->YAB1   --------->AHL20(2)      --------->DAG2  --------->ANAC58             <---------ICU4   <-----------TBP    <------ZmHOX2a(1)------>NtERF2 <-----------GT1   --------->ICU4 <-----------TBP     <----------ID1  <---------HSFB2a(2)             --------->YAB1 --GT1--------->AHL20(2)  ---------->DOF2  --------->ANAC58         <---------YAB1        --------->ANAC55(2) ------->AHL20(2)    ----------->GT1 --------->HSFB2a(2)        <----------DOF2<------ZmHOX2a(2)   tttatttatataatatctttattaggaaaaaagttgtttcccgaccagcaaaatttctctcttcttctttataatcatcagatcgttccttcacttgatt  8603500                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                       --------->ZAT14                                                                                       <---------ZAT14          <---------ARR11(3)                                             <---------ANAC58   ---------         <---------GLK1(1)                           <---------CCA1(2)   <---------ANAC58  --------->ALFIN1      --------->ANAC58                        <---------GLK1(2)   <---------TOE2(3)   <<<<<<<<<<<<<<<      --------->ANAC58                     --------->YAB1        <-----------GT1 <----------DOF2-----   ttcagggctcgaaatctctctcaaaaccctctcaaaaattccaaaacataatctcatttctcaagtttaacattttcgagcccctttagaacagtggaga  8603600                                                                       --------->CCA1(2)                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)                                                                     <------NtERF2                                                                    <---------MYB46(3)                                                                   <---------ANAC46                                                                  <---------LBD16                                                                  <------NtERF2                                                                 <---------RAP2.3(1)                                                                 <---------ATERF1(1)                                                                 ------>NtERF2                                                                <---------DEAR3(1)                                                                --------->O2                                                                <---------RAP2.3(2)                                                                <---------O2                                                               --------->ATERF1(1)                                                               <------NtERF2                                                              <---------ATERF1(1)                                                             ----------->HVH21                                                             <---------DEAR3(1)                                                             --------->DEAR3(1)                                                            --------->RAP2.3(1)                                                            --------->ATERF1(1)                                                            <------NtERF2                                                           <---------RAP2.3(1)                                                           <---------ERF1                                                          --------->ETT(1)     --------->ANAC46                                     <---------RAP2.3(3)     <---------ALFIN1                                     <---------DEAR3(1) --------->CCA1(2)                                        <---------At1g77200            --------->ZAT2 <------ZmHOX2a(2)                                        <---------DEAR4(1)             --------->At4g35610 -------->AGP1                                            <---------DREB2C(2)            <---------ZAT2 ---------ARR14(2)                                       --------->RAP2.6(3)             <---------At4g35610 -------->ARR14(2)                                      <-----------HVH21             ---------->DOF2 ---------ARR11(3)                                     <-----------RAV1(1)          --------->At5g28300 -------->ARR11(3)                                     ----------->HVH21   --------->ANAC58 >ZAT14                                              ----------->RAV1(2)   --------->ANAC46 <<LFY                                         ---------->DOF2------>NtERF2--------->ANAC58      ---- ----->DOF2      --------->MYB52(1)        --------->ANAC46<---------ATERF1(1)    <---------DEAR3(1)<   aagatccacacagataaaaaaacgggtgagttttatatcaaatagacgaaaatgcccctgtcggcgacggcggatacaagcaagacggtgaagctggaga  8603700                           --------->At4g35610                           --------->ZAT14                         --------->ANAC46                        <---------At5g28300                       <-----------GT1                      <-------TEIL                     --------->CCA1(2)                    --------->ARR14(2)                             --------->ANAC58             -----               --------->LBD16  ---------->DOF2                    --------->ANAC46           -------              <---------HSFB2a(2)   --------->ARR11(3)             --------->ANAC58           -------              --------->HSFB2a(2)   <---------ARR11(3)            --------->LBD16            ------>ZmHOX2a(1)           --------->AtMYB61  --------->ANAC58              <----------DOF2         --------->ARR11(3)         -------->P <---------ARR14(2)                   --------->ARR11(3)      <---------CCA1(2) ------->GT1  --------->ANAC46--------->ANAC58           <---------ARR11(3)   --------->HSFB2a(2)  -- -------TEIL <---------LBD16 ----------->RAV1(1)     ---------->DOF2          <---------HSFB2a(2) <xx   ggtacaatagctacctccggaagattcacagcaccaaagttctcaacgcttcttctaaagttcttttccgagcaacgcttctcgtagctcttgtcctcgt  8603800                                                    --------->ANAC58                                                    --------->ANAC46                                                    --------->ANAC58                                                 --------->At4g35610                                                 <---------ZAT2                                                 <---------At4g35610                                                 --------->ZAT2                                               <------NtERF2                                              ------>NtERF2                                              <------NtERF2                                              <---------At4g35610                                              --------->At4g35610                                              --------->LBD16                                             --------->RRTF1(2)                                             --------->RAP2.3(2)                                             --------->DEAR3(1)                                             ----------->RAV1(1)                                            --------->ATERF1(1)                                            --------->RAP2.3(1)                                            <------NtERF2                                            --------->RAP2.6(1)                                            --------->RRTF1(1)                                           --------->ABI4(1)                                           <---------ATERF1(1)                                           ------>NtERF2                                          --------->ATERF1(2)                                          --------->RRTF1(2)                                          --------->RRTF1(3)                                          --------->RAP2.3(2)                                          --------->DEAR3(1)                                          <---------ATERF1(2)                                          <---------ALFIN1                                          <---------DEAR3(1)                                          --------->RAP2.3(3)                                         <------NtERF2                                         --------->ATERF1(1)                                         --------->DEAR3(2)                                         --------->RRTF1(1)                                         --------->ORA47(2)                                         --------->RAP2.6(1)                                         --------->DEAR4(2)                                         --------->RAP2.3(1)                       <---------ALFIN1  --------->ERF1                    --------->ANAC46    <---------RAP2.3(1)                 -------->P             <---------ATERF1(1)               <---------MYB111(2)      ------>NtERF2                                <---------ZAT18               <---------MYB111(1)     <---------ALFIN1          <-----------HVH21   --------->LBD16               --------->MYB46(3)      <---------DEAR3(1)       --------->DEAR3(1) <---------LBD16      --------->ANAC46--------->ZAT14  --------->ANAC46      <---------ALFIN1      --------->ANAC46 ----->ID1     <---------MYB52(2)      --------->DEAR3(1) --------->AtMYB61       --------->MYB52(1) -->TOE1(1)    <---------MYB46(2)     ------>NtERF2<---------ZAT18     <---------HSFC1(2) -->TOE2(1)    <---------MYB55(2)     <---------ABI4(2)<---------ALFIN1--------->HSFC1(2)           - ---->ZmHOX2a(1)------->GAMYB        --------->DEAR3(1)--------->AtMYB61        --------->MYB46(3) <- xxxxxxxxxxxxxsmallRNA(le3)     <---------MYB52(1)<---------ALFIN1    <---------TOE1(2)          ----   cctcatcttcgccatcaactaccctccactctccgatagccgcgccgccgcagcacaccacctccaccgtcgtagcttcttatccaccggactcttctcc  8603900                                      ---------->DOF2                                 --------->ALFIN1                                ------->MYC3                               --------->O2                               <---------ANAC46                               --------->TGA1a                               ==================bZIP_DOF                               <---------TGA1a                               <---------O2                               --------->ALFIN1                               =======================================MYC_MYB                              ------>NtERF2                            <------NtERF2                            --------->ATERF1(1)                           <---------At4g35610                               --------->ANAC58      --                          --------->ARR14(2)                         --------->MYB46(3)          <---                          <---------ARR14(2)                       --------->MYB52(1)            ----                          --------->TCP16(1)                  ------->GAMYB  --------->ANAC58    <---                          --------->TCP20                ------>ZmHOX2a(1) <---------ALFIN1     -----            ------>ZmHOX2a(1)--------->DEAR3(1)         --------->TOE1(3)  --------->MYB52(1)  <-----   ------>ZmHOX2a(1)     --------->ATERF1(1)            --------->TOE2(3) <---------REM1(2)  <------- ----->ZmHOX2a(1)       --------->ABI4(2)  --------->ZAT18   --------->MYB46(3)            ========== --------ALFIN1        --------->ALFIN1--------->DAG2--------->ARR14(2)  --------->AtMYB61 ------>ZmHOX2a(1) -->ZmHOX2a(1) ------>ZmHOX2a(1)<-------MYC3         <---------ARR14(2)  <---------ALFIN1  ==========   tcctcctcttcttcctcctctatcggtggagccgcgtgggaaaagcgcgttagacaatcctcaacagccaaacgaccacacggtctctccgtcctagtca  8604000  Previous    Next  AGI:  At3g23820.1    Description:  GAE6 (UDP-D-GLUCURONATE 4-EPIMERASE 6); catalytic. Identical to UDP-glucuronate 4-epimerase 6 (GAE6) [Arabidopsis Thaliana] (GB:Q9LIS3;GB:Q8H7G2); similar to GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2), catalytic [Arabidopsis thaliana] (TAIR:AT1G02000.1); similar to unknown [Populus trichocarpa] (GB:ABK93061.1); similar to putative NAD dependent epimerase [Trifolium pratense] (GB:BAE71216.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43514.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Nucleotide sugar Range:  from: 8603451    to: 8605469    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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