Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->AHL20(2)                                                                                       --------->YAB1                                                                                    --------->YAB1                                                                                 --------->YAB1     <----------DOF2                                                            <---------AHL20(2)  <---------AHL20(2)                                                            --------->AHL20(2)  <-----------GT1                                                            <---------AHL20(2) -------AHL20(2)                                                             <---------ICU4 ------>AHL20(2)                            --------->AHL20(2)               --------->AHL20(2) ------>ATHB51                              <---------AHL20(2)               <--------ATHB1 ----->ICU4                              --------->YAB1                      --------->ATHB51 ->LBD16                                <---------YAB1                      --------->ICU4 >RAP2.3(2)            --------->ANAC46<---------AHL20(2)                 --------->YAB1 >RAP2.6(2)        <---------AHL20(2)  --------->AHL20(2)              --------->TOE2(3)        <---- >LBD16            --------->AHL20(2) --------->YAB1                <-----------GT1<---------YAB1   ttatttactttctcatacgaattaaacacaacttaaactattttaataaaatcgcttcaaaacatgtttattacattaataatttataataaaaatttat  8586000                                                     --------->CCA1(2)               <---------AHL20(2)                                                    --------->ARR11(3)    <----------DOF2                                             --------->ATHB12             --------->TOE2(3)         <                                             <---------ICU4            --------->ARR11(3)     <------                                             --------->YAB1            <---------ARR11(3)<---------ICU4                                            <---------ATHB12         --------->AHL20(1)  -------->ATHB1                               --------->AHL20(2)   <---------ARR11(3)<---------CCA1(2) <---------YAB1                               <---------AHL20(2) <---------TOE2(3)  <---------AHL20(1) --------->ICU4                       ------>ZmHOX2a(1)    --------->ICU4           --------->ARR11(3) --------->AHL20(1)                      --------->TOE2(3)   --------->GLK1(1)          <---------ARR11(3) --------->AHL20(2)                  --------->YAB1          <---------GLK1(1)   ----------->GT1        --------->AHL20(1)     ---------->DOF2<---------YAB1      <------ZmHOX2a(1)    <----------ID1          --------->AHL20(2)   <---------AHL20(2) --------->TOE1(3)--------->ANAC46      ----------->GT1        --------->AHL20(2) -------GT1  <---------At4g35610<---------ICU4    <---------YAB1    --------->AHL20(2)  <---------AHL20(2)   actatataaaagttgagctattatcctaaacaaaaaattacaggaaatcattaagatataaaaacgataaatatatctttaacaaaaaaaattattaaga  8586100                                                                                    --------->AHL20(2)                                           <---------TOE1(3)                     <---------ICU4              <---------DOF5.7(2)         <-----------GT1                  --------->TOE2(3)            <---------MYB52(1)            --------->MYB52(1)             <---------TOE2(3)            --------->DOF5.7(2)         <---------WOX13(1)               <---------TOE1(3) -----------GT1  --------->YAB1      <---------YAB1     --------->ZAT6  <---------DOF5.7(2) ---TOE2(3)--------->TOE2(3)<----------DOF2<---------TOE2(3)          --------->DOF5.7(2)   aattacaacatttcgttaatgctaattcttctttattttgtgattaacgatacctataacactaatgctaccattaacgttactaattaacttataaaca  8586200                                                                                     --------->ARR11(3)                                                                                     --------->AHL20(1)                                                                                     <---------ARR11(3)                                                                                 --------->YAB1                                                                                --------->AHL20(2)                                                ---------->DOF2         <---------PCF5                  ---------->DOF2         --------->ARR14(2)           <---------ZAT18             <-------GAMYB                <---------ARR14(2)           --------->ZAT18          <---------ZAT14                 <---------GLK1(2)         --------->MYB52(2)      <--------          --------->ZAT14        <---------AHL20(2)             <---------MYB46(3)   <---------AHL20(1)      <---------ICU4             --------->AHL20(2)          ------------>MYB.PH3(2)<---------AHL20(2)   aacaaaaaacattgcagttggaaagaaaacaacaattaatcgtggattctcaaaggaaccaagtgtttgttagtggaccacaataaatattttttaaaat  8586300                                                                                           --------->MYB52(1)                                                                                           ------>MYB46(1)                                                                                           -------->P                                                                                           ------>MYB83                                                                                          --------->MYB55(1)                                                                                         ----------->HVH21                --------->AHL20(2)        <---------DAG2                                 *TSS      <-            --------->YAB1                <----------DOF2                               --------->MYB46(3)       ------------>CBF            <---------AHL20(2)      <-------GAMYB                --------->DEAR3(2)      --------->ANAC58             --------->AHL20(2)  --------->GLK1(2)             ---------->DOF2      --------->ANAC58        <---------AHL20(2)      <---------GLK1(2)    --------->WOX13(1) ------- -AHL20(2) <---------ATHB12   --------->AHL20(2) <-----------GT1         ------------>CBF--------->DEAR3(1)   ggataagaacccaatgaaaaaaatagttttatttaaattaaatactttatgttacaaattctgttgaaactctctatcaatccaacttaaaccgaccggt  8586400                                                                                  ------>ZmHOX2a(1)                                                                                 --------->TOE2(3)                                                                                ------>ZmHOX2a(2)                                                                                =====================                                                                              <---------ARR14(2)                                                                              <---------ARR11(3)                                                                              --------->ARR14(2)                                                                              --------->ARR11(3)                                                                   <---------DDF1--------->TOE1(3)                                                     ------>MYB83 --------->DEAR3(1)                                                     ------>MYB46(1)        ----------->ARR10                                                   <---------MYB59--------->DREB2C(2)                                                <-----------GT1   --------->DEAR4(1)                                              --------->YAB1      --------->At1g77200<---------At4g35610                                             <<<<<<<<<ARR1       --------->DEAR3(2)  --------->At4g35610                                       <------ZmHOX2a(2)       --------->ANAC46======================                                      --------->ARR11(3)       <---------ALFIN1<------ZmHOX2a(2)                         <---------ANAC46    <<<<<<<<<ARR2   --------->ANAC46 --------->AGP1 ----------GT1<---------ANAC46        <---------ARR11(3)     <---------ALFIN1 <---------GLK1(2)     < ---->GT1<---------ARR11(3)          --------->GLK1(1)     <-----------GT1 --------->HSFB2a(2)  -----   ttaactcccaagagctacttggagttgtcgtaaacacagagatcacaatcttaccaaattttcacacaccgacatgtctagatccttagctctcgtttac  8586500                                                            <---------DOF5.7(2)                                                            --------->MYB52(1)                                                           <---------WRKY38(1)                                                           <---------WRKY12                                                    <---------ANAC46                              <--                                                    <---------ANAC58                       --------->SPL7           ---------->ID1                        --------->GLK1(2)                      --------->LBD16       <----------DOF2                           <---------ARR14(2)                   <---------LBD16   ------>ZmHOX2a(1)                             --------->ARR14(2)                  ------->TEIL ---  --------->TOE2(3)                        <---------ARR14(2)                       <---------ARR14(2) =========HOX2a_HOX2a                ----------->HVH21  <---------DEAR3(2)     --------->ICU4  <----- =========HOX2a_HOX2a               <-----------HVH21 <---------MYB52(1)  --------->ANAC46--------->MYB52(1) ---------YAB1                     --------->ANAC46 <---------ANAC58      --------->ANAC58--------->ARR14(2) ---->ANAC55(2)        <---------CCA1(2)   --------->ARR14(2)             --------->ANAC58<---------ARR14(2)   ttatccttactttgtcttcaaacccatctctcaatctccgtcacagttccgattccgtcggtaaacggcgaaatcgacgcaatgctgaaccggaacggcg  8586600                                                                 --------->ARR14(2)                                                                 <---------ARR14(2)                 -                                                               --------->LBD16              <--------                                                              <---------ANAC46              <--------                                                         <---------YAB1                 <----------DOF2                                                       --------->YAB1             --------->ANAC46 --                                                       <---------ICU4             --------->ANAC58 <-                                                       -------->HAHB4             --------->ANAC58 --        <------ZmHOX2a(1)  --------->bZIP60(1)        --------->ICU4           --------->TOE1(2)   -- -------ARR14(2)           <---------bZIP60(1)        <---------YAB1         --------->ANAC58      <- ------>ARR14(2)    <------ZmHOX2a(1)                 <---------ATHB12       --------->ANAC58    ---- ----ANAC46    <------ZmHOX2a(1)              <------NtERF2  <---------LBD16 --------->ANAC46 <------ZmHOX2a(1)   taatcggagaggaagaaggagaggagatgatgccatcggagataagtcggagagtaatgatgatgcggaaacagtacataagctacgaaactttaaggag  8586700        <---------ANAC46        <---------ANAC58        <---------ANAC58       --------->MYB52(2) -------->CCA1(2) -TOE2(3)                                                     <---------ANAC58 -TOE1(3)  <-----------HVH21                                  <---------ANAC58 ------->ARR11(1)                 <-----------GT1            <---------ICU4      <---------ZAT6 --------ARR14(2)             <---------YAB1        <-----------RAV1(2)     <---------REM1(1) ------->ARR11(3)        <-------TEIL               ===========================RAV ------->ARR14(2)      <-------PIF5                --------->WRKY18(1)------->GAMYB --------ARR11(3)      ------->PIF5 <---------YAB1<-----------HVH21----------->RAV1(1)--------->ICU4 ------->ARR10      <-----------RAV1(2)   ---------->ID1    --------->ICU4<------ZmHOX2a(1)    ------   agatatggttccttgtcagaaaccaggtgcttcttattacgcttgtcgctctggtcaggctaatgcttacaacagaggatgtagtgtcattactaggtgt  8586800                                                                                  ----------->GT1                                                                          <---------HSFB2a(2)    <---                                                                          --------->HSFB2a(2) <------                                                                    <---------GLK1(2)     --------->TOE2(3)         --------->MYB52(1)             <----------DOF2            <---------At4g35610  --------->ARR11(3)       <---------MYB52(2)     --------->ATHB12 <-------TEIL        --------->At4g35610  <---------ARR11(3) --->ZAT18                  <<<<<<<<<<<<<<<<<LFY                 <-----------RAV1(2)   --------->GLK1(1)   gctagagacactaacgacatcaagacttgaaaacattggggtctttaagtacatttgagttttaaactcagatgctctagaggcaagtgaaatcttatta  8586900  Previous    Next  AGI:  At3g23805.1    Description:  RALFL24 (RALF-LIKE 24). similar to RALFL31 (RALF-LIKE 31) [Arabidopsis thaliana] (TAIR:AT4G13950.1); similar to rapid alkalinization factor 1 [Solanum chacoense] (GB:AAR00325.2); contains InterPro domain Rapid ALkalinization Factor (InterPro:IPR008801) Range:  from: 8586389    to: 8587063    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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