Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------------->AtSPL8                                 <---------At5g28300                       ----------->RAV1(1)                                <-----------GT1                         --------->ANAC58                             <---------YAB1<---------------AtSPL8       --------->ANAC46                            --------->AHL20(1)                 --------->AHL20(2)                           <---------AHL20(2)                ----------->GT1        ------>ZmHOX2a(1)  --------->AHL20(2)             --------->ARR14(2)    <-----------GT1        --------->ATHB51--------------->AtSPL3   --------->MYB52(1)       -------- ------DOF2      <---------AHL20(2)        <---------------AtSPL3 <---------MYB52(2)   <-----------GT1 ---At4g35610   --------->AHL20(2)        ---------->DOF2 <---------ARR14(2)          --------->AHL20(2) -->At4g35610   <---------AHL20(2)    --------->YAB1      ------->TEIL  --------->ANAC58    ---------   ttcatttttcctccatttttaaatttgaattattttacagtcataaaagtacttcaaacgtatatgtaaataacgagcaacaaaacaattaactacaaca  8549700                                        --------->YAB1                                       <---------YAB1                                      --------->AHL20(2)                                 <-------TEIL                                      <---------AHL20(1)                           --------->ANAC46                                      <---------AHL20(2)                         --------->ANAC46                                      --------->AHL20(1)                <---------AHL20(1)                                     --------->YAB1                     --------->AHL20(2)                                    <---------YAB1                      --------->AHL20(1)       >>>>>>>ZML2               <---------AHL20(2)                     <---------AHL20(2) --->RAV1(1)                     <---------YAB1                   --------->ZAT6 --------->ANAC58 >REM1(1)                     --------->ICU4                 --------->YAB1      --------->ANAC58   aaactagttctagctaagagaattagttagaaatttttattataatagttagtatatgtttattcataacacaattaattaacacacaaaatacatgtaa  8549800                                                                          --------->ARR11(3)                                                      <-----------GT1     <---------ARR11(3)                                                     -------->HAHB4      <---------ICU4                                                 <---------AHL20(2)      -------->HAHB4                                                 --------->AHL20(2)      --------->YAB1                                             <---------TOE1(3)          --------->ICU4                                      <---------AHL20(2)               <---------TOE2(3)                             --------->ZAT14 <---------TOE2(3)        --------->YAB1                             <---------ZAT14 <---------YAB1         <---------YAB1                     <---------AHL20(2)   --------->AHL20(2)       --------->TOE2(3)                     --------->AHL20(2)   <---------AHL20(2) <-----------GT1  ------>ZmHOX2a(1)  <---------YAB1 <----------DOF2 --------->ICU4<---------ICU4   <---------ZAT6   tttcctctataccctcttcacatataattagagtagtgctttaatttaagattaattatcgatttacatcattaatgatcatctagtcttacacagagag  8549900                                                                                <---------ICU4                                                                                --------->YAB1                                                                               --------->ICU4                                                                               <---------YAB1                                                                              <---------AHL20(2)                                                                              <---------AHL20(1)                                                                              --------->AHL20(2)                                                                             --------->YAB1    ------                 --------->AHL20(2)                                  <---------YAB1--------->AHL20(2)         <---------AtLEC2                                          <------ZmHOX2a(1)       --------->TOE2(3)    <---------ARR11(3)                                             --------->YAB1  --------->YAB1    --------->ARR14(2)  <---------TOE2(3)                --------->YAB1  <-------TEIL<---------YAB1    --------->GLK1(2)<---------AHL20(2)          <----------DOF2 <---------TOE2(3)--------->ICU4    <---------ARR14(2)---------->DOF2      <-----------GT1       <---------TOE1(3)<---------YAB1   tttcagtatctgcatgagattatataaaggaatgtattcatgtttttacttctttttattcatggttaaggatgatacattataattataaatccataat  8550000                                                                                      ----------->TBP                                --------->AHL20(2)                                    --------->AHL20(2)                                <---------AHL20(2)                       --------->At4g35610                               <---------AHL20(2)            <---------ANAC58   --------->REM1(1)                       ---------->DOF2                       <---------ANAC58 <----------DOF2       -                   <---------------AGL15               <---------MYB46(3)--------->ZAT2         <----   ------->TEIL    ----------->TBP          --------->AHL20(2)           <---------ZAT2   <---------- --->GLK1(2)   <----------DOF2 --------->AHL20(2)--------->MYB52(1)      <---------At4g35610    -----   ctatgaactcaactattctttataaaaaaggaattaaattctgaaaataaacaactgtagttggcttcccaaggctgctgcttcacctataaatacccta  8550100                   <---------bZIP60(1)                   --------->TGA1a  <----------DOF2  --------->ANAC46                 --------->YAB1  ===========================bZIP_DOF      --------->MYB46(3) ----->ZmHOX2a(1)  --------->bZIP60(1)------>ZmHOX2a(1) <-----------GT1            --------->YAB1 -----ARR14(2)   *TSS        <-----------GT1        --------->AHL20(2)   --------->AHL20(2) -GT1         --------->At4g35610     <---------HSFB2a(2)             --------->YAB1                < ---->ARR14(2)<---------At4g35610     --------->HSFB2a(2)          --------->TOE2(3)    <-----------GT1   tcctctttgaaaactcatctcacatcacaattcacatctcctcgaacaaacaaattataaacccattttccttcataaatttctaaaataaaacccctta  8550200                                                <---------ANAC58                                                <---------ANAC55(1)                                  --------->GLK1(2)                     --------->ANAC46           <---------ANAC46                     <<<<<<<<<<<<<<<<<LFY       <---------ANAC58                   <------NtERF2                    XXXXXXXXXXXXXXXXXXXX>MIR841B*                                 <------NtERF2                    ------->GAMYB <---------ARR11(1)                              --------->LBD16                   --------->MYB46(3)       <---------SPL7                       --------->RAP2.6(2)                   <---------MYB55(2)     --------------->AtSPL3                <---------ANAC46                  ------>MYB46(1) --------->ARR14(2)                            <---------LBD16    <-                  -------->P      ------->TEIL--------->SPL7            <<<<<<<<<<<<<<<<<LFY      <--                  ------>MYB83    <---------ARR14(2)                 ----------->GT1             ----         --------->ANAC46        <---------CCA1(2)               <---------HSFB2a(2)           <----- ----------DOF2--------->MYB46(3)<---------ARR14(1)              --------->HSFB2a(2)--------->ARR14(2)   aactttcattcacatcatccaacccccaatgggtcgaatcttgaaccgtaccgtgttaatgactcttctagtcgtaacaatggccggaacagcattctcc  8550300                                                                                                    <                                                                                                  ---                                                                                                  <--                                                             <------ZmHOX2a(1)                    <--                                                            ----------->GT1                     -----                                                           ----------->GT1                     <-----                                                        --------->ALFIN1                       <-----                                                      <---------ANAC46                      <-------- --------->At4g35610                            <---------ARR11(3)                          --------- <---------At4g35610                            <---------ARR14(3)                      --------->LBD16 -------P                     <---------ANAC46  --------->GLK1(2)                     <---------LBD16 -------MYB52(1)              <---------ANAC58  --------->ARR11(3)             --------->ZAT6 <------ ----->LBD16                  <---------ANAC58  --------->ARR14(3)    <---------bZIP60(1)  --------->GLK1(1) ----LBD16           <---------MYB59            --------->ARR14(2)    --------->bZIP60(1)  <---------GLK1(1)   ggtagcttcaacgaagagtttgacttaacttggggtgaacacagaggcaaaatcttcagtggaggaaaaatgttgtcactctcactagaccgggtttccg  8550400                                                                          ----------->RAV1(2)                                                                          --------->At4g35610                                                                  --------->At5g28300                                                                  --------->DOF5.7(2)                                                                  <---------MYB52(1)                                                                 <---------DEAR3(2)                                                                 --------->LBD16                                                                --------->ATERF1(2)  ----------->GT1                                               <---------ATERF1(2) ---------ANAC46                                               <---------ANAC46                  ---- ------>ARR14(2)                                               <---------LBD16     <-----------HVH21 ---------HVH21                                                <------NtERF2       <-----------TGA1 -------ARR14(2)                                 --------->At4g35610      --------->LBD16        <--- ---->LBD16                                      <---------At4g35610      <---------At4g35610    ---- ----ANAC58                   <---------LBD16   ------->TEIL  ------>NtERF2      <------------AtMYB77 ----ANAC58      ---------->DOF2             --------->AtLEC2 <---------RAP2.3(1)--------->MYB46(3) -ARR14(2)     --------->ANAC58       --------->GLK1(2)      <---------DEAR3(1)  --------->DEAR3(2) >ARR14(2)     --------->ANAC46     <---------HSFC1(2)       --------->DEAR3(1)<---------ARR14(2)---- ---LBD16      --------->ANAC58     <---------HSFB2a(1)    <-----------HVH21   --------->ARR14(2)----   ggtcgggttttaaatccaagaaagaatatttgttcggaagaatcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctacta  8550500                                                                                                    -                                                                                                  ---                                                                                                 ----         ---------->DOF2      <---------YAB1                                                  -------  --------->At4g35610        <---------AHL20(1)                                              --------  <---------At4g35610       <---------ICU4                                         <---------At4g35610 ----->ANAC58              <---------YAB1                                          --------->At4g35610 ------ANAC55(2)           --------->ICU4                                      <-----------HVH21<---- ----->ANAC58            --------->YAB1                                     --------->At4g35610------ ----->ANAC46           <-------TEIL                                        <-------GAMYB <------ZmHOX2a(1) ----->ANAC55(2)<---------TOE2(3)                        --------->YAB1     <---------At4g35610------   cgtaagctcccaaaagttaagaaagattcattatttttgtttttgtaacaaaaaactaatgagaaaaatatgttttgcagttgtcatcggaaggaccaac  8550600  Previous    Next  AGI:  At3g23730.1    Description:  xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 16 precursor (XTH16) [Arabidopsis Thaliana] (GB:Q8LG58;GB:Q9LK45); similar to XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7), hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] (TAIR:AT4G14130.1); similar to xyloglucan endotransglycosylase/hydrolase precursor XTH-21 [Populus tremula x Populus tremuloides] (GB:ABM91075.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain G Range:  from: 8550117    to: 8551342    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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