Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->ARR11(3)                           --------->AHL20(1)                           <---------AHL20(1)                        --------->AHL20(2)                  ---------->DOF2               --------->YAB1              <---------AHL20(2)          <----------DOF2  <---------ARR11(3)   <---------ICU4    <-----------GT1 ----------->GT1  <---------ATHB12                              <---------ARR14(2) --------GT1 --------->AHL20(2)      --------->ICU4    <---------YAB1    <---------AHL20(2)   aacattttacttctttttaataaagaaaaaatatttgcaataactaaaaatcattttttgattctataaacaaaatttatgtgagtattttgtttatttc  8544500                                                                                           ------>NtERF2                                                                                          --------->RAP2.3(3)                                                                                         --------->ATERF1(1)                                                                                        <---------ATERF1(1)                                                                                        ------>NtERF2                                                                                       <---------PCF2               --------->YAB1                                                       <---------AtMYB61            --------->TOE2(3)                                                       --------->ALFIN1           --------->ZAT6                                                           <-----------RAV1(1)          <---------TOE2(3)               <------ZmHOX2a(2)             <---------ALFIN1<---------ZAT18         <-----------GT1         ---------->DOF2                   ---------->ARF1  <---------ZAT6  <   taaatgatttttaacattagtaatctctactgagacaaagatggatcatcaagaacgtagatgaggctagtctcccccctcaagtagtggtgcccccttc  8544600                                          ----------->GT1                                        <---------ZAT14                                      <---------YAB1                                    --------->YAB1                                   --------->ARR11(3)                                 --------->WOX13(1)                                  <---------ARR11(3)                               ------------>CBF                                     <---------CCA1(2)                           <---------ARR11(3)                                     --------->YAB1                           --------->ARR11(3)                                     --------->AHL20(2)                           <---------AHL20(1)            <---------AHL20(2)      <---------ATHB12                           --------->AHL20(1)           <---------AHL20(2)     --------->WOX13(1)                          <---------AHL20(2)     --------->TOE2(3)           ------------>CBF       < ---------MYB52(1)    --------->AHL20(2)--------->ZAT14 --------->AHL20(2)  -------->P          -----   ccgtttgatatgttcaactatagaataaatattttcaattagtatagtaaaacttaaatttttttcccaaaactaaactaccaattatatctctctagtt  8544700                                <---------AHL20(2)                       <---------------AtSPL8                               <---------AHL20(1)                        <---------------AtSPL3                               --------->AHL20(1)                    <---------AHL20(2)                               <---------AHL20(2)                 --------->AHL20(2)                   --------->AHL20(2)                             <---------AHL20(1)                   <---------AHL20(2)                             --------->AHL20(1)                  --------->AHL20(2)                              <---------ARR11(3)       ------>ZmHOX2a(1)<-----------GT1                  <-------GAMYB  <---------YAB1    --------->AHL20(2)      <---------MYB59<---------YAB1                     --------->MYB52(2)              ----------->GT1    ---------->ID1<---------AHL20(2)      --------->GLK1(2)  >>>>>>>>>WRKY6            --------->DAG2 ----------DOF2   <---------AHL20(1)     <---------GLK1(1) --------->WRKY38(1)        ---------->DOF2 ---->WRKY12  ------>ZmHOX2a(1)--------->AHL20(2)       <---------MYB46(3)     ----------->GT1  <----   gactttgtcctaactcctaaattatttttctaatttaatatagaaatctgtttttagtttgttgactatatattatgagtaccgataaaaaagttaataa  8544800                                                     <---------AHL20(2)                                   <---------ANAC55(2)       --------->YAB1          <-----------HVH21    --------->AHL20(2)    --------->ALFIN1       --------->TOE2(3)      --------->ANAC46      <---------AHL20(2)  --------->ALFIN1       --------->TOE1(3)      --------->ANAC58     <---------WOX13(1)   <---------ANAC46   <---------AHL20(2)         --------->ANAC58  <---------YAB1        <---------ANAC46  ---------->ID1 -------GT1         <---------TOE2(3)        <----------DOF2     --------->CCA1(2)  <---------MYB52(1)   actttttaatcttaaaaatactaagtttgtgcaagtcacataaacgacttttgattaatttttggagttatgaggtgtgttacttcgtttgtagttttct  8544900                                          <---------AHL20(1)                                          <---------ARR11(3)                                          --------->ARR11(3)                                    --------->ANAC58                                    <---------ANAC55(2)                                    ----------->GT1                                    --------->ANAC58                       <---------YAB1                                    --------->ANAC55(1)           --------->YAB1                                    --------->ANAC55(2)     <---------ANAC55(2)                                   <-------TEIL           <-----------GT1  <---------TOE2(3)                               <---------------AtSPL3 --------->AHL20(2) <---------ICU4    <---------ARR14(2)                               <---------------AtSPL8 <---------AHL20(2) --------->YAB1 <------------     <---------TOE1(2)      <-----------GT1  <----------DOF2--------->ANAC55(2)   ------>ZmHOX2a(1) -   gcattctcatgttttttgttttgaacatttttacaggtacgtaatatcttttgagttttattacttattcatgaattatggttcctattaacaaatatgg  8545000                                                                                                -----                                                                                       ----------->GT1                                                                         --------->AHL20(2)    <-----                                                          <---------GLK1(2)            <------MYB46(1)                                                 <---------AHL20(1)      <---------AHL20(2)    ------                                           --------->TOE1(3)            <---------AHL20(2)     <-----                  <----------DOF2         --------->At4g35610           <---------AHL20(1)     ------      --------->AHL20(2)            <---------AHL20(2)    <---------ARR14(2)          --------->MYB59      <---------AHL20(2)     <-----------GT1     --------->AHL20(2)     --------->AHL20(2)    ------- ---AGL15      --------->ARR11(3)   --------->AHL20(2)    --------->ARR14(2)       <---------ARR14(2) ---------->GT1<---------ARR11(3) <----------DOF2<---------AHL20(2)  --------->AHL20(2)<------MYB83   tgttgtaaaaaattcgaaatcttttgtttataaactctttaattagcttaaaaaattttggattctctagataaattatttagggaatttggtcaaaaat  8545100                                     <---------ANAC58                                     <---------ANAC58                        <----------DOF2  <<<<<<<<<GATA-1                <-------GAMYB                             ------>ZmHOX2a(1) <-----------GT1                <---------MYB46(3)                     --------->ARR14(2) ---->AHL20(2)                 <---------AtMYB61                     <------MYB83 ----ARR11(3)               <---------AtMYB61                        <------MYB46(1) --->ARR11(3)             <----------DOF2                            <---------MYB46(3) ----AHL20(1)       <---------DAG2<--------P                     --------->ATHB12 --->AHL20(1)       <----------DOF2  <---------ANAC46           <---------YAB1                   ---- -->YAB1         <-----------GT1--------->MYB55(2)            --------->MYB52(1)                <----   atttatctatattttgtttttacttttcctttggtggttgcttgaagcagtagaagtgaaggcacaacgattggttcctctttgtaaaacaattggttat  8545200                                           ------>NtERF2                                           <------NtERF2                                           --------->LBD16                                          --------->RAP2.6(2)                  <---------ZAT2          --------->ANAC46                  <---------At4g35610     --------->DEAR3(1)     <---------HSFB2a(2)                  --------->RAP2.3(2)     ------>ZmHOX2a(1)                    --------->RRTF1(2)     --------->HSFB2a(2)                 --------->RAP2.3(1)     --------->LBD16                     <---------LBD16    <---------LBD16    <---------ANAC46  <------NtERF2 --------->GLK1(2)--------->ZAT2        ------>NtERF2 --------->ARR11(3)  --------->MYB52(1) <---------RAP2.3(1)   <---------ANAC55(2)           --------- --------->ARR14(2) ----------->TGA1    <---------ATERF1(1)   ----------->GT1              <---------ARR11(3) <---------ARR14(2) ----------->HVH21  <---------DEAR3(1)  <---------MYB52(1)   <---------ANAC58 ----->YAB1       --------->At4g35610<-----------HVH21    <-------GAMYB         <---------YAB1   ---- -----YAB1       ------>ZmHOX2a(1)  <-----------RAV1(1)  ------>ZmHOX2a(2)      <---------ANAC58-----   gaaaatcctggaaaatgtcctgctgacggaaacaagttttgtcgccgcaaattggatgatcgttatgtaaaatataagcgttgcgattgtcaagatacca  8545300                                                                          <---------AHL20(2)                                                     --------->YAB1      <---------ARR11(3)                                                    <---------ATHB12     --------->AHL20(1)                                                   --------->ANAC58      --------->ARR11(3)                 <---------ALFIN1                 --------->WOX13(1)     --------->AHL20(2)      --------->ANAC58                         --------->AtLEC2          <---------AHL20(2)      --------->ANAC58                       <---------ANAC58           --------->AHL20(2)    ---------->DOF2                          <---------ANAC58         --------->AHL20(2)        ----- >CCA1(2)        --------->AtMYB61      <---------HSFC1(2)     ----------->GT1       --------->YAB1<- ----->MYB52(1) --------->MYB46(3)      --------->HSFC1(2)   <-------TEIL<---------AHL20(1)    ------ ----->DOF2  --------->MYB46(3)        ------->TEIL--------->ANAC58 --------->AHL20(2)        -------   aagggcgaaagcaaaaccaccatcgctgcatatgttatatgaaacttccttgcaatcaataggttcggataaaaatatatttgccaaaaataagagataa  8545400  Previous    Next  AGI:  At3g23727.1    Description:  SCRL12 (SCR-Like 12). Identical to Uncharacterized protein SCRL12 precursor (SCRL12) [Arabidopsis Thaliana] (GB:P82631); similar to SCRL13 (SCR-Like 13) [Arabidopsis thaliana] (TAIR:AT3G23715.1) Range:  from: 8544870    to: 8545362    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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