Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------ANAC58                                                                         <---------AHL20(2)                           --------->YAB1                    --------->At5g28300  <---------ANAC58                         <---------WOX13(1)         <---------ANAC46    --------->AHL20(1)                    <---------ANAC46                ----------->GT1     <---------AHL20(1) --------->YAB1    --------->ANAC58<---------ANAC55(2)            --------->MYB59     <---------CCA1(2)  <---------ATHB12    --------->ANAC58<---------ANAC58         <---------------AGL15<---------ICU4<-----------GT1    --------->ANAC46<---------ANAC58        <-----------------AG --------->ICU4<-----------GT1 ------ ------GT1     --------->YAB1            <---------AHL20(2) ----------->GT1<---------AHL20(2) <------   ctatttaagcaattcaaatataacgtgaatgatatactcatatataaacaaattgggtaaaacggtaatacttatatatttttaacttgccaataaacat  8497700                            <---------ANAC58                            <---------ANAC55(2)                       <---------YAB1                            <---------ANAC46                 ------->GAMYB   ---------->DOF2  <------                            <---------ANAC58                <---------MYB46(2)        <---------ZAT14                            --------->ANAC55(2)             --------->MYB46(3)        <---------ZAT18                           <---------TOE2(3)                <---------MYB111(1)       --------->ZAT18  <----------DOF2         <---------DOF5.7(2)               <------------MYB.PH3(2)   --------->ZAT14 <---------DAG2         --------->DOF5.7(2)                 <---------MYB52(2)   ---------->DOF2 --->TOE2(3)     --------->ZAT6                  --------->MYB52(1) --------->YAB1  --------------->AtSPL8 ---ICU4       <-----------GT1                 <---------MYB59   --------->TOE2(3)  <---------------AtSPL8   tagcctttttgttagatttactctacgtttacgtagtatattcaaactacataactggagcaactaacatttataaatataaagaaagtgtactatataa  8497800                                             <----------DOF2                                    ------>ZmHOX2a(1)                                             ---                                   --------------->AGL15                                       <-----         ---------->DOF2          <-----------------AGL1                            <---------ANAC58         --------->AHL20(2)     --------->ARR14(2)                                  <---------ANAC46   --------->TOE2(3)            <---------ARR14(2)                                  <---------ANAC58 ---AHL20(2)                <-------TEIL   --------->ZAT18         --------->WOX13(1)      <---------   acaaacctcattaaaacacatattcacacatacgtttcctctaagggctctaagaaaaacattcggaatcaatctccattgatttttcttggacttttta  8497900                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                           --------->CCA1(2)                                                                                      <---------At4g35610                                 <---------YAB1                                     <-----------RAV1(2)                              <---------YAB1                       --------->ANAC58 <---------HSFB2a(2) ------->DOF2         <---------ANAC58                       --------->At5g28300 --------->AtMYB61 -- ------GT1            <---------ANAC58                   <---------ALFIN1     <---------ALFIN1     -- -DOF2  <---------DOF5.7(2) --------->ZAT6       --------->YAB1    --------->ANAC58 --------->HSFB2a(2)   caaagtgtgttaacgagtcgtttagcttgatcactattcttgtttgatcaatagtcatcccaccgtaacaagaaaatcaaacacctccagatgatataag  8498000                                                          ------>MYB83         --------->At4g35610                              ------>MYB46(1)         <---------At4g35610                            --------->MYB46(3) <<<<<<<<CAMTA3                --------->At4g35610      <---------MYB59   <---------ARR11(3) ------>MYC3                 <---------ALFIN1          --------->ANAC58   --------->ARR11(3) -------MYC2          ------>MYB46(1)                  --------->ANAC58------>NtERF2 ------>MYC2          ------>MYB83             <---------YAB1         <---------ETT(1) -------MYC3  ------>ZmHOX2a(1)----------->RAV1(2)   <------ZmHOX2a(1)----------->HVH21             < ------->ANAC58     --------->AtMYB61         <---------TOE2(3)       --------->ANAC46   --------->ZAT6 ------->ANAC58  --------->REM1(1)           <-----------GT1    <---------CCA1(2)     <----------DOF2   cacgcgttctctgctccttacaccaatcccaacacctgagtgtcgatttacgataggacccaactcgtctctccgacatcttcatcttctttcactacct  8498100                                                                            <---------AHL20(2)                                                                           <---------AHL20(1)                                                   --------->ARR11(3)      --------->AHL20(2)               <---------DAG2                      --------->AHL20(1)      <---------AHL20(2)               <----------DOF2                    <-----------TBP      <---------YAB1              --        <---------ANAC46                      ----------->GT1        ----------->GT1               <-   <---------MYB46(3)                      --------->ALFIN1      <---------TOE2(3)                 -- -----------RAV1(1)       <---------ZAT6   <---------ANAC46     ---------->DOF2         <------------CBF   ctgtgttgttgtgagtacttttggagtagtgagaaatacagagaggtgtggaatatatagagaggctaaagttgtaattaattttacttagattgagaga  8498200                                                     <---------ZAT2                                                     --------->ZAT2                                                     <---------At4g35610                                                     --------->At4g35610                                                  ---------->DOF2 ----------->HVH21                          <---------bZIP60(1)<---------ANAC58 ------->At4g35610                     --------->At4g35610  <---------ZAT14        <----------DOF2 --------At4g35610           --------->ANAC46----------->RAV1(1)      <-----------GT1  <-----------GT1 --------->GT1             <---------ALFIN1 --------->bZIP60(1)<---------ANAC58  ---------->ID1   gaggtgacatgaacaagaagagtggaatcccactctacagaagatgacaacacaaagctgagtttacttgttttgcctctcttgtctttttccttcactc  8498300                                                                                            <--------                                                                                            <--------                                                                                       <---------bZIP60(2)                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC55(2)                                                                                       <---------ANAC58                                                                                       <---------ANAC55(1)                       <---------ANAC55(2)                                             <---------ANAC58                       --------->ANAC55(2)        ----------->GT1                      <---------ANAC46               --------->ZAT6            ---------->DOF2                            <---------MYB52(1)               --------->YAB1          ----------->TBP                            <---------ZAT6              <---------ATHB12       --------->HSFB2a(2)                    <---------------AtSPL8             ------>MYB46(1)         <---------HSFB2a(2)                    <---------------AtSPL3             ------>MYB83   <-----------GT1  ---------->DOF2               <------------CBF ---------   gttttagcttcaacctatcactatcacttatcacattttctataaaagaaagaagaaaaacaaactaatgctagggaaattgtacagttacgtgtttgta  8498400                                                                      <-----------------AGL1                                                                      ----------------->AGL1                                                            <-----------GT1                                                         --------------->AtSPL8                                                      <---------YAB1  <-----------------AG                                                     --------->ARR11(3)       <-----------GT1            ------>ZmHOX2a(1)                        <---------AHL20(1)      ----------->HVH21     <---------YAB1                                  --------->AHL20(1)   --------->ARR14(2)       <- -------AtSPL8                                     ------->TEIL     <-----------GT1               <-- -------AtSPL3                           <-----------GT1 <---------------AtSPL8                 <---- ------>AtSPL8                        ----------->GT1<---------ARR11(3)   <---------ARR14(2)    -----   catatatatcattcctattcgtagtgcttaaatatagagcatgttactacatgaatatttttgtacaattttgcccgatttgacaattctaagatggaga  8498500                                                   --------->ATHB12           <---------AHL20(1)                     <---------YAB1           <---------ARR11(3)                     --------->ICU4           --------->AHL20(1)                  --------->ARR11(1)           --------->ARR11(3)                  <---------ARR11(3)         <---------AHL20(1)                    --------->ARR14(2)         --------->AHL20(1)                    <---------ARR14(2)                                  <-         <---------ARR11(3)                  ----------->ARR10                                     <-         --------->ARR11(3)               ----------->GT1                                          <- ---------DOF2                           --------->DAG2                                     <-------- -------DAG2     <----------DOF2        ---------->DOF2                                    ---------- -----ARR11(3)<-----------GT1----------->RAV1(1)--------->CCA1(2)     <-----------GT1  <------ZmHOX2a(1) ---->ARR11(3)<---------AHL20(2)  --------->MYB52(1)                 --------->YAB1    ==============   ccttttctgaaaatattttctttttcgaccccaacaaaacagaaaagtagatatgattagttttgtgactataaacatttttgacttcaggattaaagtt  8498600  Previous    Next  AGI:  At3g23635.1    Description:  RTFL13 (ROTUNDIFOLIA LIKE 13). contains InterPro domain DVL (InterPro:IPR012552) Range:  from: 8497948    to: 8498079    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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