Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                               <-----                                                                                              -------                                                                                            ---------                                                                                          --------->MYB46(3)                                                                                          <---------MYB111(2)                                                                                          <---------MYB55(2)                                                                                          --------->AtMYB61        <<<<<<<GRF7                                                                       <---------MYB46(2)      ----------->HVH21                                                                   <---------MYB111(1)     <---------MYB59                                                                     --------->ANAC58    --------->At4g35610                                                                  --------->ANAC58    ----------->RAV1(2)                                                                 ------>NtERF2 ------->YAB1                                                                          --------->RAP2.6(2) ------>ICU4                                                                        --------->ANAC58 -->ZAT14                <---------SPL7                                             --------->ANAC58 ---ZAT14               --------->DEAR3(1)                     <---------PCF5     ---------->DOF2 *TSS -->ZAT18  --------->GLK1(2)                              <----------DOF2     --------->DAG2------>MYB46(1) ---ZAT18 --------------------->WRI1            ------>ZmHOX2a(1)            ---------->DOF2------>MYB83   ctgatgacctgacattcttgttttcgccgaaccaaaaaacaagacgactcctctctcgcgctttgggacctctgttttaaaaagtaaagccaccaaacca  8459700                                                                            --------->AHL20(2)                                                                      ----------->GT1                                                                      <-------GAMYB                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                  <-------MYC3                                                                  <-------PIF4                                                                  <-------MYC2                                                                  ------->MYC3                                                                  ------->PIF4                                                                  <-------MYC4                                                                  <-------PIF5                                                                  ------->MYC4                                      <---------ARR14(2)          ------->MYC2                                      <---------ARR11(1)          ------->PIF5                                      --------->ARR14(2)         <---------O2                                      <-----------ARR10          =================================bZIP_DOF                                     <---------CCA1(2)           --------->O2                                     <---------ARR14(1)          =============MYC_MYB       <-----------HVH21           <---------ANAC58              --------->TGA1a      <----------DOF2          --------->ALFIN1                  <---------ANAC55(2) --------->WRKY12            <---------ANAC58                    <---------TGA1a --------->WRKY38(1)         <---------ANAC46                    --------->ANAC55(2)            ----- ----------->HVH21           <---------ANAC55(2)                 <---------ANAC58               ----- ---------DOF2          --------->ANAC46 <-----------GT1        ------------>OsbHLH66          ------ ----ALFIN1             --------->ZAT6------->TEIL  --------->TOE2(3)----------->GT1       ---------- -->MYB46(3)     <---------MYB52(1)<---------ANAC58--------->ANAC46 <-------TEIL       <----------DOF2 >ANAC46   --------->ANAC46  <---------ANAC58    <---------ALFIN1<---------ANAC58 <---------MYB52(2)   cctttgacctttcacaccagttatctacactacgtgtgcgtatctactcttccacctaaaaaaactcacgtgcgttaaataaaaactaacttttgcaatg  8459800                             ----------->GT1     <--------ATHB1                      --------------->AGL15     --------->ICU4                      <---------------AGL15     <---------YAB1                                      -                     ----------------->AG --------->TOE2(3)                                        <<                     ----------------->AGL1    <---------WOX13(1)                                  <-                     <-----------------AGL2  ------------>ATHB5                                  ----              <---------AHL20(2)          --------->TOE1(3)                                     ----- ---->TOE2(3) --------->AHL20(2)     <---------DAG2<---------WOX13(1)                         ------>MYB46(1) ---->YAB1    <---------AHL20(1)     <---------MYB59               ------->TEIL               ------- ----->GT1    --------->AHL20(1)     --------->TOE2(3) <---------WOX13(1)    ----------->GT1  ------>MYB83 -->CBF      --------->AHL20(2)   <-----------GT1--------->ATHB12<---------ZAT18           --------->ANAC46   ttaatttttcttagaataaatttgctaaatggggtaataccttaccttgaatgattgaatgattctatgcacttatgcagagtaaaaaacaaaacccaac  8459900         <---------YAB1        --------->KAN4(2)       <---------KAN4(1)                                                                      <------       --------->KAN4(1)         --------->YAB1                          <---------ANAC58     <------      <---------YAB1            <---------YAB1                           <---------ANAC58  <---------     <---------GLK1(2)       <---------AHL20(2)                     <-----------RAV1(1) <----------DOF2 -------->YAB1         <---------YAB1                           <---------YAB1------>ZmHOX2a(1) <<<<<<<ARR2<---------YAB1  --------->AHL20(2)                <---------AHL20(2)        --------->TOE2(3) --------ATHB12       <-----------GT1                         --------->AHL20(2)      <---------YAB1 ----->WOX13(1)      --------->YAB1                          <---------AHL20(1)      <---------ARR11(3) ---->MYB46(3)      --------->ICU4                           <---------AHL20(2)      --------->ARR11(3) ---->RAV1(1)       <---------ATHB12  --------->MYB46(3)     --------->AHL20(2)     --------->YAB1   aatcaaagattattctaattcaattatcaattttatcataacaaacaaaaactcttttgacaaattatttatgtggcttcctctaattatctttaacttt  8460000                                                                               ==============HOX2a_HOX2a                                                                               <------ZmHOX2a(2)                                                                      <-----------HVH21                                                                     <---------O2                                 <---------AHL20(2)                  <---------bZIP60(1)            -                             <---------RVE1(1)            --------------------->WRI1                <                             <---------CCA1(1)      <-----------RAV1(1)       --------->ARR11(3)    -     <---------AHL20(2)     --------->ARR11(3)      --------->ALFIN1 --------->O2                <---     --------->AHL20(2)<-----------HVH21     --------->HSFB2a(2)     --------->TGA1a             <--- ---DAG2        <---------AHL20(2) <-----------GT1  *TSS <---------ANAC46     <---------ARR11(3) <--- ----DOF2  ------------>CBF <---------ARR11(3)      <---------REM1(1)<---------TGA1a   <---------ARR14(2) --GT1    <-----------GT1 ----------->ARR10  <---------HSFB2a(2)     --------->ANAC46 <------ZmHOX2a(1)   tttttgtttaattcacaatttatgtggtcagatattttttcttccttccacaaggtgttgccttgaaaatcacgtcggaagatcacgaggaatcgttttg  8460100          --------->MYB52(1)       --------->MYB46(3)      --------->ANAC58      --------->ANAC58     ------>NtERF2    <---------ALFIN1    --------->DEAR3(1)                             <---------DEAR3(2)   --------->ATERF1(1)                             <---------MYB46(3)   --------->ORA47(2)                        <---------ANAC46  <---------ATERF1(1)                        <---------ANAC58 --------->ANAC46                            <---------ANAC58 --------->ANAC58                           --------->MYB52(2) --------->ANAC58                       <---------DEAR3(2) -------->ZAT18                         <------MYB83 ---------ZAT18                         <------MYB46(1) -------->SPL7                          <---------MYB46(3)                                    ------>ZmHOX2a(1) ------ANAC58                       <-----------RAV1(1)                                <----------DOF2 ------ANAC46                       <---------MYB46(3)                   <---------TOE2(3)   -------- ------ANAC58                    <----------DOF2 ---------->ID1          <---------TOE1(3) ----------   cgtgcgccacccaaacagacaaaacaaaaacacttcttttgttggttccttgtcggtttccaagggtttttgtttagggttttcattttctttttcctta  8460200                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                     <---------WRKY12                                                                                    --------->WRKY18(1)                                                                                   <-----------HVH21                                                             --------->ARR11(3)   <------MYB46(1)                                                             <---------ARR11(3)  --------->MYB59                                                          <---------HSFB2a(2)  <------ZmHOX2a(1)                                    --------->TOE1(3) --------->ARR14(2)     <---------TOE2(3)                       --------->ANAC46          --------->CCA1(2)           <---------TOE1(3) ->TOE2(3)           <---------ALFIN1           <----------ID1        <-------TEIL<------MYB83 >ID1    ------>ZmHOX2a(1)          --------->TOE2(3) <---------ARR14(2)  <----------DOF2   tctatctaatcctctgtttctctccacatcaaaaaaaacctcaaaattaagagacgaattcgagataatgggttcgcttaaggaaggtcaaggaagagac  8460300                                                                      <-------TEIL                                                                   <------MYB83                                                                   <------MYB46(1)                                                                  <---------------AtSPL8                                                                  --------->MYB111(1)                                                                  --------->MYB46(2)                                                            --------------->AGL15                         <----------DOF2                    ----------------->AGL1                   <---------ARR14(2)                       <---------------AGL15                   --------->ARR14(2)                      ----------------->AGL1                 ---------->DOF2                           <-----------------AGL1               --------->At4g35610                         <-----------------AG             --------->YAB1                       <-----------GT1 --------->MYB59      ----------->GT1 --------->RAP2.3(2)        <-------TEIL   <---------MYB52(1)    --------->At4g35610   atggaagaaggtgaatcagaagagccgcttttgatggctcagaaccagagattcactatgttccccattaggtacaaatctatttgggagatgtataaga  8460400                                                                                                   <-                                                                                                  <--               <---------ZAT14 <----------DOF2                                                  <----              <---------HSFB2a(2)      <---------ANAC58                                        <-----              --------->HSFB2a(2)      <---------ANAC58                               <---------HSFB2a(2)           --------->GLK1(2) ------>ZmHOX2a(1)                                        --------->HSFB2a(2)          <---------GLK1(2)<---------ZAT18                                            <---------LBD16    --------->ANAC58      ---------->ID1                     <XXXXXXXXXXXXXXXXXXXXMIR390A/B ---------    --------->ANAC58  <--------P   <----------DOF2   <---------TOE1(2)        <-----------GT1  ------   aggctgaagccagtttctggactggttagtcctctttctttccttgaaattttcttatgttctctgttcttcttgagtttgaactattctcggagttgtg  8460500   <-------TEIL <---------ARR14(2) --------->ARR14(2)                                                       ----------->GT1 --------MYB46(3)                                                        <---------TOE2(3) -------ANAC46                                                    <------ZmHOX2a(1) -----ANAC46                                                    <---------TOE2(3)                >>>> ----AtMYB61    <---------TOE2(3)                         <---------MYB52(1)        --------->ARR11(3) >ALFIN1  <---------YAB1                 ---------->DOF2 <-------GAMYB<---------AHL20(2)        ----- --->ALFIN1     <---------YAB1<----------DOF2       <----------DOF2   --------->AHL20(2)       <-----   gtggatacagttttgattaagaaagtttgtgactttgtaaatgtaaagcttcttcttttcgttgtttaggattttaatgtaatatagatgttccattttg  8460600  Previous    Next  AGI:  At3g23570.1    Description:  dienelactone hydrolase family protein. similar to dienelactone hydrolase family protein [Arabidopsis thaliana] (TAIR:AT3G23600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71083.1); contains InterPro domain Dienelactone hydrolase; (InterPro:IPR002925) Range:  from: 8457785    to: 8459698    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g23580.1    Description:  RNR2/RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate reductase. Identical to Ribonucleoside-diphosphate reductase small chain A (RNR2A) [Arabidopsis Thaliana] (GB:P50651;GB:Q9LUH0); similar to TSO2 (TSO MEANING 'UGLY' IN CHINESE), ribonucleoside-diphosphate reductase [Arabidopsis thaliana] (TAIR:AT3G27060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71085.1); contains InterPro domain Ribonucleotide reductase-related; (InterPro:IPR012348); contains InterPro domain Ribonucleotide reductase; (InterPro:IPR000358); contains InterPro domain Ferritin/ribonucleotide reductase-like; (InterPro:IPR009078) Range:  from: 8460052    to: 8462822    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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