Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------ANAC58                                        <----                                        <---------ANAC58                                        -----            ----------->GT1 --------->YAB1 --------->SPL7                                       <----        <---------AHL20(2)--------->AHL20(2)       <----------DOF2                     --------->YAB1        --------->AHL20(2)<---------AHL20(2)     ------>ZmHOX2a(1)                    --------->ZAT6 --------->LBD16         --------->YAB1--------------->AtSPL8         <---------MYB52(1)  --------->YAB1 <---------YAB1      <---------YAB1    --------------->AtSPL3       ----------->GT1 <-----------GT1 ------>ZmHOX2a(1)  --------->AHL20(2) <---------------AtSPL3    --------->ZAT6 <----------DOF2 -----   atcctgataaaaaaatgtaaatttttataaaaataacatagttcgtacttcctctttttatcgaataacactgttatttcttcttttaacaataacaata  8436300      ---------->DOF2                                                                              <- -----AHL20(1)                              --------->MYB52(1)                                   <--- ---->AHL20(1)                            <---------MYB59                          --------->AHL20(2) -----AHL20(2)        --------->YAB1      <---------MYB52(2)             --------->MYB52(1)     <---- ---->AHL20(2)       <---------YAB1  --------->YAB1                --------->CCA1(2)         <-------   aaatgccataaatcagactcaaaatgataaacaagtttagaataactaactatggtgtaattgtggaagataaacaaactgaacataaaatagtattggt  8436400                                                                                             --------                                                                                         --------->AHL20(2)                                                                                        <---------YAB1                                                                                <---------AHL20(1)                                                                         --------->TOE1(3)  ---------                                                                         --------->TOE2(3)<---------AHL20(2)    --------->AHL20(2)                                                <-----------GT1<---------AHL20(2) -------P                                                          <----------DOF2   <---------YAB1 ------MYB46(3)                 --------->TOE2(3)             <-----------GT1   <---------AHL20(2) -----AtMYB61     --------->MYB52(1)           --------->ANAC46<---------ZAT18  --------->AHL20(2) --AtMYB61     >>>>>>>>>>>>>>>>>LFY--------->YAB1   <------NtERF2  <---------DAG2<---------AHL20(2) <   ggtagattaaacaataggcccaatggaagtttttcattaataatccaacaagtcgccagtttttttgcacttttaccttcaattttttttattaaaaagg  8436500                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                             <-------                                                                                            <--------                                                                                            =========                                                                                            ---------      <-----------GT1                                                                 --------->ANAC58 ->DAG2                 <---------TOE2(3)               ----------->GT1               --------->ANAC46 ->DOF2            <------ZmHOX2a(1)             --------->At5g28300        --------->YAB1  ========= ------NtERF2    <---------TOE1(2)              ----------->GT1      --------->ZAT14  --------->ANAC58   gcagggtttttcgatattgtaggattaatgtgtattgttttaaacatagagggtaaaatagcaaaatccagtaaacaaaaataagaaaacgcaaacgtcg  8436600 ------ANAC46 ----GAMYB -----MYB46(3)                                                                           <-----------ARR10 ---->MYB55(2)                            <---------AHL20(2)                            <---------CCA1(2) ----ANAC46                               --------->AHL20(2)                     <---------ANAC58 ----HVH21                                ----------->TBP                        <---------ANAC46 --- -TGA1a                           <---------ZAT18                                <---------ANAC58 <-- ====MYC_MYB                      --------->ZAT18              <----------ID1 *TSS    <---------ANAC58 >TGA1a                 <----------DOF2 ----------->TBP   --------->ANAC46  <-----------RAV1(1)------ ==================================bZIP_DOF       <----------DOF2      --------->YAB1 <---------ANAC58   ggtgttttgaaacgagccaaacacagctttaacttgtgggctatatatatagctttgcacacataagaacaaaacataatgtggcttggcttatctcctc  8436700                <-----------GT1               --------->ZAT14              <----------DOF2        <---------ARR14(2)        --------->ARR14(2)                                                       ------>ZmHOX2a(1) ------>At4g35610         <---------ARR14(2)                            <-----------GT1 -------At4g35610         --------->ARR14(2)                           <-----------GT1 <---------AHL20(2) >ZmHOX2a(1)------>ZmHOX2a(1) ------>ZmHOX2a(1)--------->YAB1  <-----------GT1  --------->ANAC46   agcacaagtgtttcctctttactcttcaaatccttcttcattctcccattcacaattccttcatttttcatttttaacttatcctccatttttttttctg  8436800                                                       <---------ARR11(1)                                                       --------->ARR11(3)              <---------AHL20(1)           --------->LBD16              --------->AHL20(1)          <---------LBD16              --------->AHL20(2)         <---------LBD16              <---------AHL20(2)       --------->ARR14(2)              --------->ARR11(3)       <---------ARR14(2)       --------->STY1(2)              <---------ARR11(3)      <---------GLK1(1)<-----------ARR10             --------->AHL20(2)       --------->GLK1(1)<---------ARR11(3)           --------->AHL20(2)      --------->ANAC58    --------->ARR14(2)         --------->AHL20(2)        --------->ANAC58    <---------ARR14(2)   --------->ANAC46                --------->ANAC46   <---------GLK1(1)   --------->ANAC58          <---------GLK1(1)        <---------CCA1(2)        <---------At4g35610 --   --------->ANAC58          --------->GLK1(1) <---------KAN4(2)<---------STY1(2)                <---   aaaacacacaaaaaaatatattcggttttagaattccaagaaatccgggaatgagcatatctctctagctagactcattccagcaaactctgaatcaatt  8436900               --------->ARR14(2)          <------ZmHOX2a(2)         --------->ARR14(2)         --------->AGP1----------->GT1         <---------ARR14(2)        <---------At4g35610        --------->At4g35610  ---------->DOF2                                                      --- --------------->AGL3  <---------ZAT6     <-----------GT1                          --------->ATHB12 --------GT1   <---------ARR14(2) ----------->GT1                      <-----------GT1     <---------   tcccattttcagatccaaatccattgtgttaaaaagaggtaaaatcactctacatttctcttattgttttttttaacaaatttgttcattggtctttgtg  8437000                                                   <---------GLK1(2)                                     --------->AHL20(1)                                     <---------AHL20(2)                                     <--------                    --------->AHL20(2)          --------->YAB1                         --------->ZAT18     <---------GLK1(2)               <---------AHL20(1)              ---------->DOF2  <-----------HVH21 ------>ICU4     ----------->GT1     --------->AHL20(2)   <---------TOE2(3)       ---------->DOF2 -DOF2          ----------->GT1     --------->AHL20(2)    <---------TOE1(3)    >>>>>>>>>TBF1---------   cttattagattgtcgaagaagataaaatagatttcgaaataaattcacaaccagaattttgaggtttattagaaagtagaagaagaaaggtcactgtaga  8437100                                                                                     --------->AHL20(1)                                                                            --------->AHL20(1)                                                                            <---------AHL20(1)                                                                            --------->ARR11(3)                                                                            <---------ARR11(3)                                                                         --------->AHL20(1)                                                                         --------->AHL20(2)                                                                         <---------AHL20(2)                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)              -                                 <---------ARR11(3)              <---------AHL20(2)  <---------AHL20(1)                                 --------->ARR11(3)             --------->AHL20(2)   <---------ARR11(3) -ZAT14                    <---------ICU4                       <---------AHL20(2)   --------->ARR11(3) >ZAT14             ---------->ID1                --------->HSFB2a(2)--------->AHL20(2)          <---   ttgagtctaccattgttcatttgttctcatcttgacatcttcaatgtagcatctagagactccaaattaaataaataaaatattcaatattttggtttta  8437200  Previous    Next  AGI:  At3g23530.1    Description:  cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative. similar to cyclopropane fatty acid synthase-related [Arabidopsis thaliana] (TAIR:AT3G23480.1); similar to cyclopropane-fatty-acyl-phospholipid synthase [Arabidopsis thaliana] (TAIR:AT3G23470.1); similar to cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative [Arabidopsis thaliana] (TAIR:AT3G23510.1); similar to cyclopropane fatty acid synthase [Gossypium hirsutum] (GB:AAT74602.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71457.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68017.1); contains InterPro domain Cyclopropane-fat Range:  from: 8436678    to: 8442853    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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