Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->HSFB2a(1)                                                              <---------HSFB2a(1)                                                             --------->GLK1(2)                                                <---------AHL20(2)                                      --------->ZAT6        <---------GLK1(2) -------->ATHB12                 <---------ANAC58        --------->ANAC58              --------->WOX13(1) --------YAB1                <---------ANAC58   <---------ATHB51                  <------ZmHOX2a(1) ------->ICU4                <---------ANAC58<---------AHL20(2)                 <---------TOE2(2) ----->YAB1     ----------->GT1  <---------ANAC58        --------->ANAC58       <---------TOE1(2) ----DOF2 --------->TOE1(2)<---------YAB1    --------->AHL20(2)                 <---------TOE2(3)   gatgattgtgaaccagggatgtgaaatatatgcttgcttaacactcttaaattattctcaaggaatctttcgattgtgttcttaggattcaattagtaat  8375000                  <---------ARR11(3)        <---------ANAC46                  --------->ARR11(3)        <---------ANAC58                                       --                 <---------CCA1(2)          <---------ANAC58                        --------->ANAC58            ----------->HVH21           <-------GAMYB                               --------->ANAC46    <---------ANAC58                   <-----------RAV1(1)                          --------->ANAC58    <---------ANAC46                   --------->MYB52(2) --------->YAB1 <---------ANAC58      ------    <---------ANAC58                   <---------MYB46(3)<---------YAB1  <---------ANAC58 --------->AtMYB61   agacttgagtgtgtttgacatatctattgggcttcgattgtttgttgcgtttacatgttataataggtttttatttcttggttcaaacgaaaccaaaact  8375100                                                                                                    -                                                                              <---------ARR11(3)    -                                                                              --------->ARR11(3)    -        <---------ICU4                                                     --------->LBD16         --       <---------ATHB12                    <---------YAB1                 <---------LBD16 --------->AHL20(2) ----------->GT1                        <----------DOF2                   <-----------RAV1(2)     --- -------->DOF2 <-----------GT1         <---------ANAC58           <----------DOF2         <---------AHL20(2) --->TOE2(3)<---------AHL20(2)         <---------ANAC58           --------->TOE2(3)      --------->AHL20(2)   taaaagtaaatcatttttttctactgaattttgtttttgatgcttttgatttcatttgatcacttcaactttagttccagggtcttgacgatttaattca  8375200                                                                                   <---------------AGL15                                                                                   --------------->AGL15                                                                                  <-----------------AGL3                                                                                  <-----------------AGL2      --------->AHL20(2)                                                     ------>ZmHOX2a(1) -------->ANAC58                                                            --------->TOE2(3) -------->ANAC58                       <----------DOF2                    <---------ATHB12 ---------->GT1                  --------->DAG2        --------->PCF2    ------>MYB46(1)       ------ ------->DAG2                   ---------->DOF2<-------TEIL              ------>MYB83----------->TBP ------->DOF2    <------ZmHOX2a(1)  <------ZmHOX2a(1)  <---------PCF2  --------->AtMYB61     --------   aaaagcaaaaaaatcaataggaaacaaaaactcataaaggactttgacatacagatgggcccattgtttatgaccaatccttatactatatatgggcctt  8375300                                                                                               ------                                                                                               <-----                                                                                              ------>NtERF2                                                                                             --------                                            --------->ZAT14                                  --------                                            <---------ZAT14                                  --------                                          <---------------AtSPL8                             --------                                        --------->DAG2                                       <-------                             <---------TOE2(3)     --------->AHL20(2)                        <-------                        <---------At4g35610 --------->ZAT18                                 ---------                        --------->At4g35610 <---------ZAT18    <----------DOF2             ------>NtERF2        --------->TOE2(2)    <---------TOE1(3)    ----------->TBP                          <---------ATERF1(1) --->ICU4 ---------->DOF2<---------GLK1(2)--------------->AtSPL8   <-----------GT1<---------ZAT6    - --------->AGL1  ---------->DOF2       ---------->DOF2    <<<<<<<<<TBF1        *TSS       --------->DEAR3(1)   attagttaaacctaaggcccaaagtcagattagggttttcagaaagtgtactataaattcttcttctttaaacaacttcgtctagtggaacgacgacggc  8375400     <-----------HVH21   --------->ANAC58                                              <----------DOF2 --->ZAT18             --------->ANAC58                                            --------->WRKY38(1) -NtERF2               --------->ANAC58                                            --------->WRKY12 ->ANAC58             <-----------------------TaNAC69(2)                           --------->WRKY45 ->ANAC46            --------->CCA1(2)                                            --------->DOF5.7(2) ->ANAC58<---------LBD16 --------->ANAC58                                         <---------MYB52(1) ->bZIP60(1)    <------ZmHOX2a(2)                                                <-------GAMYB --DEAR3(1)   --------->GLK1(1)                                                 <---------MYB46(3) --bZIP60(1)  <---------GLK1(1)                                                 --------->MYB52(2) >RAP2.6(3)--------->LBD16      ----------->GT1   <----------DOF2              <-------TEIL --------->DOF2<---------ARR11(3)--------->At5g28300                      ---------->DOF2   acaaaagcttcaccggagatcagagacgcgaaaatggtaaattgtttcttctctttcgatgtgattttggaatttgtaaagttcgttgactttgaagaac  8375500                                               ---------->DOF2                                             <---------YAB1                                           --------->YAB1                                          <---------YAB1                                        --------->WOX13(1)                                       ------>ZmHOX2a(2)                  --------->AHL20(2)  <------ZmHOX2a(2)                  <---------AHL20(2) <---------AGP1                 <---------WOX13(1)  --------->ARR14(2)                                   ---------->DOF2               --------->ATHB12      <---------ARR11(3)            <---------YAB1     --------->TOE2(3)             <---------WOX13(1)      <---------ARR14(2)    --------->YAB1             --------->TOE1(3)           --------->ATHB12          --------->ARR11(3)    >>>>>>>>>RAP2.2         <-----------GT1         <--------P                  --------->AGP1        --------->TOE2(3)     <---------WOX13(1)         <---------WOX13(1)         <---------CCA1(2)   --------->WOX13(1)    <---------YAB1   aacaatacatggttgattgatttattgtattgtttttcagatctatcataaaagttttcaatctaaatgatgtttgtattttgattaaccttaaaagtct  8375600                                                                   ---------->DOF2                                                             ---------->DOF2                        -                                                  <---------------------WRI1              --------->ANAC46                                         ------->TEIL   --------->KAN4(2)                 --------->ANAC58                                      <---------YAB1   --------->HSFB2a(1)                --------->ANAC58                       <-------TEIL<---------AHL20(2)  <---------KAN4(1)        <---------ZAT6 ------   cttgattttgtatgtgtgtgagtgattcatttttgattttatgaattttgaaggtgaacattccaaagacaaagaacacttactgtaagaacaaggaatg  8375700                                                                         <---------ICU4                                                                        --------->ICU4                                                                        <---------MYB52(1)                                                               ---------->DOF2                  <----                                                            --------->ANAC58           --------->GLK1(2) --------->DAG2                      ----------->GT1        --------->ANAC58    --------->At5g28300 < --------->DOF2        --------->ANAC58                <---------At4g35610 <---------YAB1       <---- ----->GT1             --------->ANAC58 ---------->DOF2--------->At4g35610 ----------->HVH21    <----   caaaaagcatactttgcacaaggttacccaatacaagaagggtaaagacagtcttgctgctcaaggaaagcgtcgttatgaccgtaaacaatctggttat  8375800                             ----------->GT1                            --------->DAG2                           --------->DAG2                          ---------->DOF2                      --------->LBD16 --------->YAB1                      <---------------AGL15                                          --------->At4g35610                      --------------->AGL15           <---------WOX13(1)             <-------GAMYB                     <-----------------AGL1         --------->ATHB12                --------->MYB52(2)                     <---------------AGL15         --------->ICU4          <------MYB83             < -----AtMYB61        ================================================================================ ---------MYB46(3)   --------->HSFB2a(2)      --------->AtLEC2             <------MYB46(1)       <--- -----YAB1           <---------HSFB2a(2) --------->YAB1                   --------->MYB59     <------ -------RAV1(1)      --------------->AGL15 <---------YAB1    <-----------GT1        --------->MYB46(2)   ggtggtcagactaagcctgtcttccacaaaaaggtaacattgattatcatgcattgattgttttttcagtttgaattaggtctagttagttgaaatgagg  8375900  Previous    Next  AGI:  At3g23390.1    Description:  60S ribosomal protein L36a/L44 (RPL36aA). Identical to 60S ribosomal protein L36a (RPL36AB) [Arabidopsis Thaliana] (GB:O23290;GB:Q7GD84); similar to 60S ribosomal protein L36a/L44 (RPL36aB) [Arabidopsis thaliana] (TAIR:AT4G14320.1); similar to unknown [Populus trichocarpa] (GB:ABK94266.1); contains InterPro domain Ribosomal protein L44e; (InterPro:IPR000552); contains InterPro domain Ribosomal protein, zinc-binding; (InterPro:IPR011332) Range:  from: 8375379    to: 8376399    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version