Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ----------->RAV1(1)            <---------ARR11(3)                                <-----------GT1       XXXXXXXXXXXXXXXXXXXX>MIR3933                      <---------ARR11(3)      ====================   --------->ANAC58                             --------->ATHB12     <---------ANAC46       <--------   --------->ANAC46                        <---------DAG2--------->ARR11(3)      <---------------AGL15   --------->ANAC58                        <----------DOF2 ----------->GT1      --------->TOE2(3)   aaaacaagaaacaagataacaacacaaataagtttgagaaaaaaactttttgatttgaagatagtaacattttgtgtagttttcttaaccaggtatcatt  8373600                                                             ------>ZmHOX2a(1)                        <---------ANAC58              <---------AHL20(1)                        --------->ALFIN1              --------->ARR11(3)                        <---------ANAC46             ----------->TBP              <---------CCA1(2)      --------------->AGL15                    <---------MYB46(3)          --------->ARR14(2) <<<<<<<<<TBF1          <---------ANAC58      <---------TOE1(2)            <---------GLK1(2) =====================MADS_MADS              <---------MYB52(1)    --------->ARR14(2)--------->ARR11(3) -YAB1<---------------AGL15        <-----------GT1 --------->AHL20(2)      <---------ARR14(2)   ttcttcttctccaaacagaaatagatgtgtgtgttttttatcttatcgtttgtttatatattcctctcaaatttgcagaaactcatagctcttggacatc  8373700                                                                                                -----                                                                                                -----                                                                 <<<<<<<<<<GT-3b                -----                                                             <---------AHL20(2)            <---------ARR14(2)                                                            <---------AHL20(2)     ------------>CBF                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------YAB1    -----                                    --------->ANAC46    <----------DOF2    --------->GLK1(2)   <-----             <----------DOF2   <-----------GT1       --------->ARR11(3)   <---------GLK1(2)--------->ARR14(2)    ------->TEIL         ----------->GT1             <---------ARR11(3) <---------YAB1    <------ZmHOX2a(1)   tatatgaatctatttctttgttaaatagggttttatctactccacaaacatgtaagttcttttttatttttcttaagattcttatcgcaataggattcac  8373800         --------->AHL20(2)         <---------AHL20(2)                                                              <---------YAB1        --------->AHL20(2)                                                         --------->AHL20(2)        <---------AHL20(1)                                                         <---------AHL20(2)        <---------AHL20(2)                                                        <---------AHL20(2)   ------------>CBF                                                           <---------AHL20(1) ---->ANAC58                                                                  --------->AHL20(1) ---->ANAC46            <---------ATHB12                             ---------->DOF2  <---------AHL20(2) ---->AtLEC2           --------->GLK1(2)                        --------->GLK1(2) --------->AHL20(2) ---->ANAC58          --------->WOX13(1)     <---------CCA1(2) <---------GLK1(2)--------->TOE2(3) ----LBD16          ------------>CBF  ---------->DOF2       >>>>>>>>>TBF1  --------->AHL20(2)    ----   gcaaaaacaatttaattctttggccaatctatgcattaccgaaagttgtatccctaagagaagaagaatctcaaagaaaaaatattaatttatgaaaaaa  8373900                           --------->MYB59                        <---------STY1(2)                        --------->ZAT2                        <---------ZAT2                                                              <                       --------->ANAC58                                                             <                 <---------ANAC58   --------->At4g35610                                         <----                 <---------ANAC46   <---------At4g35610                                         <----                 <---------ANAC58  ------->TEIL                                           <-------TEIL            <---------ANAC58<------MYB46(1)                    ----------->HVH21      <---------TOE2(3)         <-----------GT1--------->STY1(2)              --------->AtMYB61              ---------------     <---------AHL20(2)--------->ANAC58               --------->bZIP60(1)             <-------------- <---------AHL20(2)----------------------->TaNAC69(2) <---------bZIP60(1)    ---------->DOF2--------- ------->GT1<---------ANAC58<------MYB83            <-----------GT1         <---------AHL20(2)  <----   tgtttattttttttccttggtgtgcaagctaggtatgcatctgcaagttgaatatgacctcacctatgaagggtctattaaaaggtttgaggtacattgc  8374000      <---------DEAR3(1) <-----------ARR10 <---------ARR14(2) --------->ARR14(2) <---------ARR11(1) <---------TOE1(2)                  <------ZmHOX2a(2) ------->TEIL                      <---------ARR11(3) ---------CCA1(2)                  --------->ARR11(3)                       --------->ARR11(3) ---------ARR14(1)                --------->YAB1                           <---------CCA1(2) -----ANAC58                   ---------->DOF2                         --------->TOE2(3) -----ANAC58             --------->ANAC46                            --------->GLK1(2)   --------->AHL20(1) >AtSPL3                <---------HSFB2a(2)                         <---------GLK1(2)    --------->AHL20(2) -AtSPL8                --------->HSFC1(1)                          <---------ARR14(2)   <---------AHL20(2) ------------>WRI1      <---------HSFC1(1)                          --------->ARR14(2)  --------->AHL20(2) -----ANAC46            --------->HSFB2a(2)                  ---------->DOF2<---------ARR11(3)  <----   tcgtatcttcggtgagtttatttgttctcgaaacaaagatcatatatgtctatacaattaccaaaaatcagattcttaaatcttataaaaaaaaattgtt  8374100                                        --------->DEAR3(2)                                 --------->ANAC58                                        --------->MYB46(3)                                 --------->ANAC58                                       ------>MYB83                                        --------->ANAC46                                       ------>MYB46(1)                                     ------>MYB46(1)                                       -------->P                                        <---------ALFIN1                                      --------->MYB52(1)                                 --------->AtMYB61                                      --------->MYB55(1)                                --------->MYB46(3)                                     --------->AtMYB61                                 -------->P                                     <---------MYB111(2)                            <---------ZAT2                                     <---------MYB111(1)                            <---------At4g35610                                     <---------MYB46(2)                      <---------ZAT18     ----                           <---------ARR14(2)        <-----------RAV1(1)     --------->ZAT18     <---                           --------->ARR14(2)<-----------HVH21     <------ZmHOX2a(1)--------->ZAT2   <------ZmHOX2a(1)   <-------TEIL  --------->MYB46(3)    <---------------AGL15    --------->At4g35610 -----REM1(1)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------ANAC46   --------->PCF2------>MYB83   gtagaggatgagaaggaaccagagatgcagattggaataccaaccgatgtcaaacatgttgctcatataggatgggaagggccctcagctaccaccccaa  8374200          ------>ZmHOX2a(1)      <---------ARR14(2)      --------->ARR14(2)      <---------ARR11(3)      <-----------GT1                                                                          ------     --------->GLK1(1)      <-----------GT1                          <---------ARR11(3)     <--------     <---------GLK1(1)   --------->YAB1                              --------->ARR11(3)    <-------TEIL     <---------CCA1(2)  <---------YAB1                               --------->AHL20(1) --------->At4g35610    <---------KAN4(2)  <---------AHL20(2)    <----------DOF2         <---------AHL20(1) <---------At4g35610    ---------->TaMYB80 --------->AHL20(2) <---------ARR11(1) <------MYB46(1)     <---------KAN4(2) <---------ANAC46   <---------ARR11(3)    --------->ARR11(3) ----------->GT1     --------->ARR14(2) ----->ZAT2         --------->AHL20(1)    <---------ARR11(3) <------MYB83        ---------->TaMYB80 ------ZAT2         <---------AHL20(1)   <---------CCA1(2)  --------->MYB59      <---------ARR14(2)   gctgggtatatccttctctcaatatttttataacatattctacatatcttttgtttgtggattaggtcaaatattttcatgggaatatgcagatgcatga  8374300                                                                --------->LBD16                                                                <---------LBD16                                                               <---------ANAC58                                                               <---------ANAC46                                                               <---------LBD16                                                               <---------ANAC58                                                              <---------LBD16       -------->P                                           --------->ARR14(2)       ------>MYB46(1)                                      <---------ARR14(2)          --------->ANAC58       --------->MYB52(1)                                  <---------GLK1(1)            <---------ANAC55(2)       ------>MYB83              --------->ANAC58          --------->GLK1(1)            ----------->GT1  --------->ANAC58               --------->ANAC58    --------->TOE2(2)                  --------->ANAC58  --------->ANAC58             ---------->DOF2       <---------LBD16          <------ZmHOX2a(1) --->ATHB12                  --------->ANAC58        --------->TOE1(2)    --------->TOE1(2) -AtLEC2    <------ZmHOX2a(2)--------->ANAC58       ----------->RAV1(2)   --------->TOE2(2)     -----   tttcaagcctaccgatcaaacgaagactgagacgaaaggaacatctaacaaaaaacctgggagttccggggagaaacataggaagggaagacgtaaaaca  8374400                                                                                                    <                                                                                                   <-                                                                                                  xxx                                                                                                <xxxx                                                                       --------->LBD16        <xxxxxx                                             <------ZmHOX2a(2)       <---------LBD16       --------->ZAT14                       <-----------ARR10    --------->ARR14(2)      <---------ALFIN1       <---------ZAT14            ------->GAMYB              <------MYB46(1)             <---------REM1(2)  <---------At4g35610           <---------MYB52(2)         --------->MYB111(2)         ----------->RAV1(1) --------->At4g35610    <------ZmHOX2a(1)  <---------ARR14(2)   <---------ARR14(2) --------->ANAC58  xxxxxxxxxxxxxxxxxxxx   --------->ANAC46    --------->GLK1(2)<------ZmHOX2a(1)      --------->ANAC58 <xxxxxxxxxxxxxxxxsmallRNA(s)   --------->ANAC58    --------->ARR14(2)  <------ZmHOX2a(1)   --------->ANAC46---------->DOF2<------   ----------->GT1------>MYB83        --------->MYB111(1) --------->YAB1     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   --------->ANAC58   <---------GLK1(2)<------MYB83     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  ------- ---->TOE2(3)     ------>MYB46(1)    <--------P   ---------->DOF2<xxxxxxxxxxxxxxxxsmallRNA(s)<-------   tcaacaggaaacaactcacctacagaatctccatcaagggtaggaggatcagtaaggccatcaaaacgcaacacggggaaacaaagagagcagaacacgg  8374500  Previous    Next  AGI:  At3g23380.1    Description:  RIC5 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 5). similar to RIC1 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT2G33460.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83875.1); contains InterPro domain PAK-box/P21-Rho-binding (InterPro:IPR000095) Range:  from: 8373954    to: 8374715    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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