Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->AHL20(2)                     <---------AHL20(2)                     --------->ATHB51                                                       ---------                    --------->ICU4                                                <---------ICU4              --------->GLK1(2)                                                  <---------YAB1          --------->YAB1                                                         --------->ICU4          <---------ICU4                                          --------->ARR11(3)        <--------         --------->ICU4                                  --------->ICU4        --------->YAB1    ----         <---------YAB1                             --------->YAB1<-----------ARR10    <---------TOE2(3)       --------->YAB1<---------ICU4                 ----------->GT1       --------->YAB1  <--------P     <---------ARR11(3)<---------YAB1        <----------DOF2      <---------ARR11(3)   <---------TOE1(3)   aaatcgagataataataatctaattatttttaaaaatttagacactgctttgtattgtaatttttgaatatctaattcataacataattaaggtagctta  8311400                                                                                --------->TOE2(3)                                                                                --------->TOE1(3)                                                                                --------------->AGL15                                                                  <---------ANAC58         ----------->GT1                        <---------ANAC58  <---------ANAC58       ---------->DOF2   <----------DOF2        <---------ANAC58  <---------bZIP60(2)     <---------AHL20(2)  ---------->DOF2        <---------DAG2         <---------ANAC46 ----------->STF1        <---------AHL20(2) >At4g35610          <---------ZAT18      <---------YAB1        <---------TGA2(2)        --------->AHL20(2) -At4g35610          --------->ZAT18  ----------->GT1          ----------->TGA1----------------->AGL3 ------>DOF2  <---------AHL20(2)   ---------->DOF2   ----------->GT1    <----------DOF2--------->TOE2(3)   aaagaaaagaaaagaaaaaattgtgccctttatttgagaaaggtataattgtgtgaagttaaacgatgacgtttctttggtaccttaaatattaatttgt  8311500                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                 ----                                                                                                 ----                                                                                                 ----       --------->AHL20(1)                                                                       -----       <---------AHL20(2)                                                                      ------       --------->AHL20(2)            --------->TOE2(3)                         ------->TEIL  --------       <---------AHL20(1)           <---------ANAC55(2)               <---------TOE2(3)  --------->AHL20(2) --------->YAB1              <----------DOF2         --------->ATHB12---------->DOF2   --------->TOE2(3)   gtttgataatttattgtctatagattgaatgctttgttacataaatgggtttgaatcaatggataatggattaaagaaatggatgtttacattaaacaac  8311600                                                                                  --------->TOE1(3)                                                                                  --------->TOE2(3)                                                                           --------->ATHB51                                                                           <---------AHL20(2)                                                                           <--------HAHB4                                                                           <---------ICU4                                                                           --------->YAB1                                                                           -------->HAHB4                                                                           -------->ATHB1                                                                          <---------ATHB51                                                                          <---------YAB1                                                                          --------->ICU4            --------->MYB52(1)                                          <--------HAHB4            ------>MYB83                                                --------->YAB1         --------->ANAC46                                               <---------ICU4 ------->ANAC58                                                         --------->ATHB51 ------->ANAC46                                                         <--------ATHB1 ------->ANAC58                               ------>MYB46(1)          --------->AHL20(2) ------->RAV1(1)                              ------>MYB83             <---------ATHB12 ----->AtMYB61                              <---------MYB59        --------->MYB46(3) --->GAMYB<---------MYB59           <---------YAB1      ----------------->AGL1   ----------->RAV1(2) ---->MYB46(3)                  <----------DOF2        <-----------------AGL1  <-----------GT1      < -->P <---------ZAT14          <---------ANAC58      --------->GLK1(1) <---------ATHB51   ------>MYB46(1) ->MYB46(3) ------>MYB46(1)    <---------ANAC58  <-----------RAV1(2)   --------->ICU4     ------>MYB83   cacacaagtataccgaaccgaaattgtttgatggctttgttatagaccgaaccaggtttccaattcggaaccaataattattaacctgaaccaaatcgaa  8311700                                                <---------HSFB2a(1)                                                --------->ZAT2                                                --------->HSFB2a(1)                                                --------->At4g35610                                                --------->HSFC1(2)     --------->ATERF1(1)                        <---------HSFC1(2)    <---------ATERF1(1)              <-----------------AGL1    <---------RAP2.6(3)--------->DEAR3(2)     <------ZmHOX2a(1)    ------>NtERF2    ------>MYB46(1) ----------------->AGL1<---------YAB1   <---------ANAC58  --------->MYB52(1)--------->LBD16    <------------CBF              *TSS   <---------ANAC58------->GAMYB     <---------LBD16    <---------AHL20(2)      <----------DOF2 <---------At5g28300 ------>MYB83   <-----------GT1    <----------DOF2          <---------MYB52(1) -----------GT1    <---------MYB59 <-----------GT1 <-------TEIL       ------------>CBF <----------DOF2   atttgccgtctccgaattcaaccgaaccgaagttttttttccggtttaggagcttcgttttattgttgatgcttcaatttccctttggcctttgatacaa  8311800                                      <------NtERF2                                     ------>NtERF2                                    <---------DEAR3(1)                                  ------>NtERF2                                  <---------ATERF1(1)                                  --------->LBD16                             --------->At4g35610                             --------->ZAT2                             <---------At4g35610                             <---------ZAT2                             <---------GLK1(1)                             --------->GLK1(1)                            ----------->ARR10                         --------->ALFIN1                        --------->At4g35610                                                 <--------                        <---------At4g35610         <---------ANAC46                        <--------                     ---------->DOF2----------->HVH21     <---------GLK1(1)                 <--------                  ------>NtERF2  <---------DEAR3(1) <---------DEAR3(1)                      ------->TEIL                 --------->LBD16<---------LBD16    <---------MYB52(1)                       ---------                <---------HSFB2a(2) --------->DEAR3(1)    --------->GLK1(1)                <---------ARR14(1)                --------->HSFB2a(2)--------->ATERF1(1)<------NtERF2                      --------->TOE1(1)          <-----------ARR10 --------->ARR14(2)    <-----------HVH21                     ------>ZmHOX2a(1)          --------->GLK1(2) <-----------ARR10    --------->DEAR3(1)         --------->LBD16<---------CCA1(2)         <---------GLK1(2)  <---------ARR14(2) <---------At5g28300        <---------LBD16--------->TOE2(1)   aatggtagagagattcttcccgacgaagcggagctccggcgacgagaatcaccgtcggggaaatctctcgcttctctccggtccaatttcctcgtatctt  8311900   ------>ZmHOX2a(1)  --------->TOE2(3)                                                        <---------ARR14(2) ---ARR10                           --------->ZAT14              <---------ZAT14 -ARR11(1)          <---------AHL20(2)                           --------->ZAT14 -ARR14(2) <----------DOF2         <----------DOF2          ------>ZmHOX2a(1)       <---------At4g35610 >ARR14(2) <---------DAG2  <---------GLK1(2)      <---------ATHB12         --------->ARR14(2)    ----   tcttcctcagacgcttttctcttaaatttgattctctctttactctgtctcactcattgttcctctctacagaggcaaaacctctctgctcttccaatta  8312000                                   <---------ANAC58                                   <---------ANAC58                                   <---------ANAC46                              --------->O2                              <---------O2          ----------->GT1                              --------->TGA1a       --------->LBD16              <-----------------AGL1                         --------->MYB46(3)       <---------LBD16             <---------MYB52(1)   --                      --------->REM1(1)           --------->At4g35610     ------>ZmHOX2a(1)        --                    <---------HSFB2a(2)        ----------->HVH21       <---------ATHB12            --          <---------ANAC58    <---------TGA1a <-----------HVH21       <---------ARR14(2)       <-----          <---------ANAC46--------->AtMYB61----------->RAV1(2)        --------->ARR14(2)      -------          <---------ANAC58<---------ALFIN1 <---------At4g35610   <---------ARR14(2)     <---------TOE1(2) ----->At4g35610    --------->HSFB2a(2)    --------->At4g35610   --------->ARR14(2)    <-----------RAV1(2)   gctctcaatgtagcgagtgcttctacaaccactcgtgtcgtcttcatctgtcaccggaaaaaaatcgaatccaatcctccgtttctctctcaggtacctt  8312100                          <------MYB83                          <------MYB46(1)                         --------->MYB59                               ------>ZmHOX2a(1)                       <---------MYB52(1)                            <---------HSFB2a(1)              --------->ARR11(3)                                     --------->HSFC1(2)          <---------At4g35610                                        <---------HSFC1(2)          --------->At4g35610                                        --------->HSFB2a(1)        ----- ------->ANAC58  <----------DOF2                 <---------GLK1(2)  ==============HOX2a_HOX2a   <---- ------->ANAC58 ===============================HOX2a_HOX2a          <------ZmHOX2a(2)          ------ ------->ANAC46 ------>ZmHOX2a(2)       <------ZmHOX2a(1)  --------->LBD16 ------>ZmHOX2a(1) -------- -----DOF2----------->RAV1(2)           ===================================HOX2a_HOX2a       <------- -->TOE2(3)   <---------ARR11(3)      <---------TOE2(3)  <---------LBD16   <---------At4g35610 ------   tacgccatcttcatctgatctttctgttaggttttgtattgaggaatttcaaattcttctcagggaatcgatccttcctctgatgtattcaatcgaatcc  8312200                                                                                             <-------                                                                               --------->CCA1(2)                                                                              --------->ARR11(1)   <---------ANAC55(2)                                                        --------->ARR11(3)   --------->ANAC55(2)                                                        <---------ARR11(3) ---------->AGL15                                                             <---------ARR14(2) -----------AGL15                                                             --------->ARR14(2) ----------->AGL3                                                       <---------WOX13(1)   <------- ->ARR14(2)                                                    --------->ARR11(3)         --------->ICU4 --ARR14(2)  --------->ANAC46        <-----------GT1  --------->ATHB12--------->ATHB12    <---------YAB1 ----------->AGL2                  <---------AHL20(2)<---------ATHB12<---------YAB1  <---------At4g35610   agattaagtaagaacacaaaaccaatttgaaaactaatttaacttagtttagcgaatgattcgatgattttgtgattgaagatatgtagatgatgatgaa  8312300  Previous    Next  AGI:  At3g23255.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO68683.1); contains domain SSF52540 (SSF52540) Range:  from: 8311788    to: 8313093    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version