Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------At4g35610      --------->At4g35610     --------->MYB52(2)   <---------MYB52(1)                                                                             ---   --------->DOF5.7(2)                                                                            <--  --------->TOE2(3)                                     <----------DOF2             <-------TEIL <---  --------->TOE1(3)      --------->GLK1(2) <------ZmHOX2a(1)                       --------->CCA1(2) ------->MYB52(1)   --------->CCA1(2)    <---------TOE2(3)               <---------ZAT6          <---   ataacgttagctacttcgaaagataagattccaattgtttgtttaggaagagagactggtttaggggttttcttagtggaagaagattcaagaagaagag  8261600                                                          ----------->GT1 <---------ANAC58                                    >>>>>>>>>>>>>>>>>LFY <---------ANAC58                                --------->HSFB2a(2) ------>ZAT18                                  --------->At4g35610 -------ZAT18                               --------->HSFC1(2) ------ANAC58     <---------ANAC58          <---------HSFC1(2)                              --------- ------ANAC58     <---------ANAC58<-----------GT1<---------HSFB2a(2)                    ---------->DOF2   cgtgcttgagattagaacttacttggtttctcattttcacaatccaagcttctgaaaccattgtaaaaatcgaaactttgaaaacaatttcaaagaaagt  8261700                                    ---------->DOF2                              ----------->GT1                            <---------LBD16                            --------->LBD16                           <---------ANAC58                           <---------ANAC46                           <---------ANAC58                          <-------TEIL                          <-----------------------TaNAC69(2)                          ------>ZmHOX2a(2)                         --------->CCA1(2)                         <------ZmHOX2a(2)                        <---------ARR14(2)                <---------YAB1      <------ZmHOX2a(1)                        --------->ARR14(2)            <---------GLK1(2)  <---------HSFB2a(2)                        <---------GLK1(2)           <---------TOE2(3)<----------DOF2                -    <----------DOF2     --------->AGP1       ----------->GT1      <-----------GT1               ----- ->DOF2               ----------->ARR10  ---------->DOF2<---------ICU4   --------->HSFB2a(2)---------   ttgagtctttatggagattaagaacagatccgtggaaaaaaagaaaagggtttttagattatgacatttaactttctcgaggaatgaagaaatgaaaagg  8261800    <---------ICU4    --------->YAB1    --------->ATHB12      <---------------AGL15    -------->ATHB1        --------------->AGL15                                            ----------   <---------ATHB12   --------->At5g28300                                                 --------->ALFIN1   --------->ICU4     <------NtERF2   <---------ARR11(3)                               --------->DAG2   <---------YAB1    <---------DEAR3(2)<---------REM1(1)                              ---------->DOF2 ----------->ATHB5  --------------->AtSPL3------->TEIL   <----------DOF2          ----------->GT1 ------>GT1         <---------DEAR3(1)--------->ARR11(3) <---------DAG2         ---------->DOF2 ->DOF2      --------->ICU4    ---------->DOF2         <---------At4g35610   <------ZmHOX2a(1)    >>>   gtttaatcattggggattatgggcggtacttgaaaaagaagatgtaccattgatgtgagctttttgagggattggagaaggagaaagtaaaagtggtgaa  8261900                                                               <---------HSFC1(2)                                                               --------->HSFC1(2)                                                               --------->HSFB2a(1)                                                               <---------HSFB2a(1)                                                           --------->LBD16                                                          --------->ANAC46                                                      --------->ZAT2                                                      <---------ZAT2                                                     ------>MYB83--------->ARR11(3)                                                   --------->MYB46(3)                                                   <---------MYB59 <---------ANAC58                                                  --------->ANAC58 <---------ANAC58          >>>>>>>>>TBF1                           --------->ANAC58<-------TEIL    >>>>>>>>>TBF1                        <---------TOE1(3)--------->ANAC58 >>>>>>>>>TBF1                           <---------TOE2(3)--------->ANAC58 ->GT1 >>>>>>>>>TBF1                    ---------->DOF2  <---------LBD16                      ------- >>>>>>TBF1                          <----------DOF2 ------>MYB46(1)                 --------->ARR11(3)   gaagaagaagaagaagaagatgggttttgatgagggaagctttaaagtttggacccaactccgcaaggttcttgtaagagacagagagatgttgaagaaa  8262000                                                                         <---------AHL20(2)                                                                        <---------AHL20(1)                                                                        --------->AHL20(2)                                                                     <---------AHL20(2)                ----------->GT1                                     --------->AHL20(2)           ---------->DOF2                                          <---------AHL20(2)     --------->ARR11(3)                                            <---------YAB1                <---     --------->ARR14(2)                                         <---------YAB1            <---------REM1(1)     <---------ARR14(2)            *TSS                       ----------->GT1  ---------->DOF2   <---    <------ZmHOX2a(1)  >>>>>>>>>CBP60g                 ---------->DOF2  <---------AHL20(2)<---------bZIP60(2) --->DOF2<---------YAB1>>>>>>>>>SARD1     ---------->DOF2     <---------MYB46(3)          <----------   gagagaggattttgaaagttgtgaaatttgggtttgattttgagaaaagagagagaagaaagagttgttattaatttttttgaaagggagtgatgttgca  8262100    <---------ANAC58    <---------ANAC58                      <---------AHL20(2)                  --------->ARR11(3) ------ZAT2                              --------->AHL20(2)                  <---------CCA1(2) ------At4g35610            <---------AHL20(2)  <-----------GT1            --------->AHL20(2) -RAV1(1)       <---------TOE2(3)       <---------AHL20(2)<-----------GT1 <---------AHL20(2)   gctagtacttgctccactaatgttcttcatttttttttgtattttaaattttactcaaattttcaacttattctattttaaatcttgggaatttcaacct  8262200                                                                <---------AHL20(2)                                                                --------->AHL20(2)                                                                --------->ICU4                                                           ----------->GT1                                                     <---------AHL20(2)                       <----------DOF2            <---------AHL20(1)                          -------                <---------ICU4                    --------->AHL20(1)  <---------ANAC55(2)     <------               <---------ATHB12                   --------->AHL20(2)  <------MYB46(1)    <---------ANAC58             ------>MYB46(1)                    --------->AHL20(1)    --------->ANAC55(2)<---------ANAC58             ------>MYB83                       <---------AHL20(1)    <------MYB83       <---------ANAC46           <---------MYB59              ----------->GT1  ---------->DOF2            <---------bZIP60(2)     --------------->AtSPL3     --------->ANAC46--------->ARR11(3)   <---------TOE2(3)--------->ALFIN1     --------------->AtSPL8  <-----------GT1    <---------ARR11(3)   --------->MYB59<---------ANAC46   attcaatacagtaccaaatcattctcttttttatccacaattttgttaaaaatattttataaagaaaaaattaggtatttttggtgatgtggagtgatgt  8262300                                         --------->AHL20(2)                           <---------YAB1--------->AHL20(1)                          --------->AHL20(1)                                                     ----                         --------->AHL20(2)                                               --------->AHL20(1)                         <---------AHL20(2)           --------------->AGL15               --------->ARR11(3)                        <---------AHL20(2)        <-------TEIL                            <---------AHL20(1)                 --------->YAB1          <---------AHL20(1)                               <---------ARR11(3)                 <---------ICU4          <---------AHL20(2)                              --------->CCA1(2)                --------->ICU4         <---------TOE2(3)                <---------ANAC46<---------ARR11(3)           --------->TOE2(3)  <-----------GT1    --------->CCA1(2)      <---------ZAT6  --------->ARR11(3)         <-------TEIL   --------->ICU4--------->YAB1  <---------------AGL15          <---------TOE2(3) -->bZIP60(1)   <---------ATHB12      --------->AHL20(2)       --------->ARR11(3)   ---------->DOF2 ---bZIP60(1) --------->WOX13(1)   --------->TOE2(3) <-----------------AGL3  <---------TOE2(3)  -----   ctcacaaaatatacatcaatcatgaaattattttacacattaatattttagatacactaattttggatattgtggtgttaagtttttaaagatatatttt  8262400                         --------->AHL20(2)                      <---------ICU4                    <---------TOE2(3)                  --------->AHL20(2)                  <---------AHL20(2)--------->AHL20(1)                 --------->ICU4     <---------AHL20(1)            --------->ANAC58        --------->ARR11(3)            --------->ANAC46        <---------ARR11(3)            --------->ANAC55(2)   <---------AHL20(2)                 <---------ANAC46            --------->ANAC55(1)   <---------AHL20(1)                 <---------ANAC58            <---            --------->ANAC58      --------->AHL20(1)                 <---------ANAC58     <---------ANAC55(1)      --------->TOE2(3)  <---------AHL20(2)                <---------ANAC46               <---------ANAC58 ------->GT1--------->YAB1     --------->AHL20(2)          <---------O2     --------->ICU4<---------ANAC46 ---->MYB59 ----------->GT1  <---------AHL20(2)            --------->O2----------->GT1    <---------ANAC58   ggtaaatttcttaaacgtaattaatatttattttaaaatatttttaaaagttttgtttttgacgtctattgacttgtaatatttgttttgtttcgtgtat  8262500  Previous    Next  AGI:  At3g23160.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G04550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71334.1); contains InterPro domain Protein of unknown function DUF668 (InterPro:IPR007700) Range:  from: 8259862    to: 8262035    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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