Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->ATHB51                                                                  -------->HAHB4                                                  --------->ATHB51<--------ATHB1                                                  <---------AHL20(2)                                                  --------->AHL20(2)               <--------ATHB1                                                 <---------AHL20(2)           <---------MYB52(1)                                                 --------->AHL20(2)          --------->At5g28300                                                 <---------AHL20(1)          --------->TOE2(3)      <--------P                           ----------->GT1        --------->ATHB12 --------->YAB1    <------MYB46(1)                 <---------TOE1(3)             <---------ICU4   <---------ICU4    <------MYB83              <---------------------WRI1         <---------ATHB51  <---------AHL20(1)    <---------MYB46(3)--------->AHL20(2)  <---------TOE2(3)      <---------YAB1   --------->ICU4   --  <---------WOX13(1)  <---------AHL20(2)  --------->MYB59        --------->ICU4 --------->YAB1  ----- -------->ATHB12     --------->AHL20(2)   <---------TOE1(3)      --------->AHL20(2)<---------AHL20(2) --------YAB1      --------->GLK1(2)<---------TOE2(3) <---------AHL20(2)    ----------->GT1  -------- ---GT1        <------ZmHOX2a(1)    --------->DAG2<---------ICU4 <---------AHL20(2)--------->AHL20(2)   tttgattggttagtataggagaatttaaaaacgacgataaggtttaggtaaattatttcatttgaaaataattgagcaccgttaataattttcatccata  8235800                                                                                                    <                                                                                                   --                                                                                    --------->WRKY38(1)                                                                                  --------->At4g35610                                                                                  <---------At4g35610                                                                                  <-------GAMYB    --                                                                             <---------ANAC46     ---                                                                           <---------ANAC58      <---                                --------->AHL20(2)                      <---------MYB46(3)--------->ANAC58 --------->AHL20(2)      ------>ZmHOX2a(2)    --------->MYB46(3) ---------->DOF2 --------->MYB52(2)<- --------->YAB1 --------->ARR11(3)       --------->YAB1     <---------YAB1 <---------ANAC46  -------- ------->AHL20(2)<---------YAB1 <---------AHL20(2)          ----------->GT1<---------ANAC58--------->MYB46(3) ---->AHL20(2)  <---------ARR11(3)  <-------TEIL      --------->DAG2   <---------AtMYB61  --------->ANAC58 ->TOE2(3)  --------->YAB1     --------->AHL20(2)    ---------->DOF2   --------->ALFIN1   --------->ANAC46   aaataatatttcaaagatgatatttgatccccattaaattcattcgtaaccaaaaaaaagttatgaaaaaagagtggtcgtgtgagttgcccaagcacca  8235900                <---------ICU4                                                               <-------               --------->AHL20(2)                                    --------->AHL20(1)      --------           --------->AHL20(1)                           <---------------AGL15                --------           --------->AHL20(2)                         --------->At4g35610                    <-------    --------->AHL20(2)                                <---------At4g35610                    ------->TEIL    --------->YAB1                                <---------ICU4     <---------AHL20(1)  <-------TEIL --------->YAB1<---------AHL20(2)    --------->AHL20(2) --------------->AGL15          --------->ARR14(2) ---------YAB1 --------->ICU4    <------ZmHOX2a(1)--------->YAB1     <---------ARR11(3)<---------ARR14(2) ------->AHL20(1)       ----------->GT1           -------->HAHB4     --------->ARR11(3)<---------GLK1(2) ------->AHL20(2)       --------->ANAC58    ------>ZmHOX2a(1) ----------->GT1         --------->At4g35610 ------>YAB1   <---------ATHB51<---------TOE2(3) <---------YAB1<----------ID1         <---------At4g35610 ------YAB1<---------AHL20(2)--------->ICU4 ----------->GT1  --------->DAG2          ----------->ARR10 --------AHL20(2)       --------->ANAC58--------->ARR11(3)  ---------->DOF2        <---------MYB52(1) --->RAV1(1)  <---------AHL20(1)----------->GT1  --------->ICU4----------->GT1    <-----------HVH21   ttataataaaaaataaaataattagcaagtaataaggaataaaatcctgtaattatagctgaaaaaggaaaaatatttggagaccgtcagattcgaatct  8236000                                   <---------DEAR3(2)                                  <---------DEAR3(1)                                 <------NtERF2                                <---------DEAR4(2)     --------->YAB1             <---------RAP2.3(1)                                ----------->TBP ---------->DOF2               <---------DEAR3(1)                                  --------->AHL20(2) ----ARR10                     <---------RAP2.3(2)                   <-----------GT1           <<<<<< ->GLK1(2)              --------->TOE2(3)            --------->At4g35610         ----------->TBP ->ARR14(2) --------->DAG2  --------->DAG2           <---------At4g35610------>ZmHOX2a(1) <---------- --ARR14(2)---------->DOF2 ---------->DOF2 --------->YAB1           <-----------GT1<---------AHL20(2)   gaacaaagcataaaaaagtcaacaaaacttaaagcggcggtctcatcgtaatctcagcccaataccctattttcctctcccctatataaatactttcttc  8236100                                                                          xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                          xxxxxxxxxxxxxxx>smallRNA(se3)                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                         xxxxxxxxxxxxxxxx>smallRNA(se3)                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                      xxxxxxxxxxxxxxxx>smallRNA(i)                                                                     xxxxxxxxxxxxxxxx>smallRNA(s)                                                                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                     xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                     xxxxxxxxxxxxxxxx>smallRNA(i)                                                                    xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                    xxxxxxxxxxxxxxxx>smallRNA(s)                                                                    xxxxxxxxxxxxxxxx>smallRNA(i)                                                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                              --------->ALFIN1      xxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                              <-----------RAV1(1)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     --------->WOX13(1)             *TSS xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                   ------------>CBF                 XXXXXXXXXXXXXXXXXXXXX>MIR173 ----       ------>ZmHOX2a(2)        --------->ARR11(3)        <---------ANAC55(2)                   -----     --------->ARR11(3)         <---------AHL20(1)        --------->ANAC55(2)            <---------MYB46(3)     <---------ARR11(3)         <---------ARR11(3)<------MYB83 <----------DOF2     <<<<<<<<<<<<<<<<<LFY <<<TBF1                        --------->AHL20(1)<------MYB46(1)   <---------ANAC58     ----------->GT1 --------------ANAC81          --------->AHL20(2)<---------AtMYB61  <---------ANAC58<---------At5g28300   ttctactgatcttcttctcacaaataaacccaaatatatcaatctactgtgttggtgattaagtactttcgcttgcagagagaaatcacagtggtcaaaa  8236200                                                      <---------ANAC58                                                      <---------ANAC58                                                    --------->ARR11(3)                                                    <---------ARR11(3)                                      xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                  xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                           -----                                xxxxxxxxxxxxxxxxxxx>smallRNA(le3)                               -----                                xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                               -----                                xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                              <----                                xxxxxxxxxxxxxxxx>smallRNA(i)                                    <----                              xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                       <---------TOE1(3)                              xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                        <---------TOE2(3)                              xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                      <---------AHL20(2)                              xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                    --------->AHL20(2)                              xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  --------->ATHB12 ---          --------->TOE2(3)   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                <---------YAB1  <---- <---------REM1(1)        ------>ZmHOX2a(1)     ---------->DOF2               <---------At4g35610<--- ----->DAG2          <----------DOF2xxxxxxxxxxxxxxxxxxx>smallRNA(se3)         --------->YAB1    ----- ----->DOF2  ---------->DOF2  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       <---------CCA1(2)       <-----   aagttgtagttttcttaaagtctctttcctctgtgattctctgtgtaagcgaaagagcttgctccctaaacttatctctctgatgatttaatgttagaga  8236300                               <---------ANAC58                               <---------ANAC58                               <---------ANAC46                           --------->At4g35610     <---------CCA1(2)    ----------->HVH21                                              --------->TOE2(3) ---->ARR14(2)           ------>ZmHOX2a(2)                                               --------->YAB1 ---->ARR14(3)          --------->CCA1(2)                                             --------->MYB52(1) ---->AGP1              <------ZmHOX2a(2)                                         <---------TOE2(3) -----ARR14(2)         <---------ARR14(2)                                   --------------->AGL15 -----ARR11(3)         --------->AGP1                                       <---------------AGL15 --->ZmHOX2a(2)        --------->ARR14(2)                <---------YAB1    <-----------------AGL2 -----ARR14(3)         --------->ARR11(3)             <---------YAB1       <-----------------AGL1 ---ZmHOX2a(2)         <---------AGP1          --------->ATHB12          --------->ARR11(3) ---->ARR11(3)         <---------ARR11(3)     <---------YAB1             <---------ARR11(3)  <------- ----GLK1(1)        <---------WOX13(1)   <---------At4g35610        ---------->DOF2   <---------DOF5.7(2)   tcttcgtaaatctatgtgtttgatagatctgatgcgttttttgagttgatgatttgattatttttcactggaaagtatctcattagggtaacgataatgt  8236400                                                                                        <---------ICU4                                                                                       --------->ICU4                                                                               ----------->GT1                                                                             <-------TEIL         <-------GAMYB          <---------ICU4                              --------->CCA1(2)        <------MYB83 --------->ARR14(2)                                     --------->GLK1(2)        <------MYB46(1)       <---------ARR11(3)                            --------->ARR14(1)       <---------AtMYB61      --------->ARR11(3)--------->GLK1(2)          <---------ARR14(2)    --------->ARR14(2) <-------TEIL           <---------AHL20(2)           --------->ARR11(1)    <---------ARR14(2)<------ZmHOX2a(2)      --------->AHL20(2)            --------->ARR14(2) <---------TOE2(3)   --------->AGP1<---------WRKY18(1)                     <---------GLK1(2)       <- --TOE2(3)           <---------ARR14(2)----------->GT1       ------->TEIL <---------GLK1(1)<---------   tttatggatttggttgtataacagatccatgaaatcttgactggttataaaatctgaataatgtatttcaatttggagattcggtgataaaaattactga  8236500                                              <---------AHL20(2)                                           <-------GAMYB                                          ----------->GT1                                          <---------MYB46(3)                                        <---------ANAC58                                        <-------GAMYB                                        <---------ANAC58            --------->AHL20(2)         <------MYB83     ----------->HVH21                 <------MYB46(1) <---------YAB1                       <---------AtMYB61 ----------GT1                 <---------At4g35610            <------ZmHOX2a(1) --GT1      <---------AHL20(2) --------->At4g35610----------->GT1      --------->GLK1(2)        <----   tttacgaatgacatttatatcgatagatgagtttgctgatttggttgttaaattgataaatcaaggacatgagaaactgtttttgtatgctaatttgtcc  8236600                    <------ZmHOX2a(1)                                     <---------ARR14(2)                --------->ALFIN1                                          <-----------ARR10              <---------At4g35610                                         --------->GLK1(2)              <------MYB83                                                --------->ARR14(2)              --------->At4g35610                                      --------->MYB46(3)   ---------              <------MYB46(1)                        <---------TOE2(3)------>MYB83        <---------YAB1     <---------AHL20(2)                        <---------YAB1         ------>MYB46(1)  <---------YAB1    --------->AHL20(2)   <---------MYB52(1)--------->TOE1(3)         ----------->RAV1(1)--------->YAB1    <---------AHL20(2)   --------->ALFIN1  --------->TOE2(3)       --------->MYB46(3)  ----------->GT1 -----AtLEC2 <---------DEAR3(1)       <------ZmHOX2a(1)    <---------TOE2(3)         --------->YAB1   atggaataaaattgggaggtgaggaccgtgagggtagtcaggaaaccttaatattgaagttgatgttgaaccaacaaatctgcccaaaaatgataaaagt  8236700  Previous    Next  AGI:  At3g23125.1    Description:  MIR173; miRNA Range:  from: 8236168    to: 8236253    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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