Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->ATHB12                                                                           -------->HAHB4                                                                           <---------AHL20(2)                                                                           <---------ICU4                                                                          --------->ICU4                                                                          <---------YAB1                                                                        --------->YAB1                                 --------->HSFB2a(2)                    <--------ATHB1            ---                                 <---------HSFC1(1)                     --------->ATHB51         <---                                 --------->HSFC1(1)   <---------AHL20(2)<---------ICU4  --------->ATHB51                                 <---------HSFB2a(2)  <---------YAB1    <--------HAHB4  <---------ICU4                 <---------AHL20(2)                  --------->AHL20(2)--------->AHL20(2)   <--------                 --------->AHL20(2) <<<<<<<ZML2   --------->AHL20(2)   <---------ATHB12 -------->ATHB1         --------->ARR14(2)<---------ARR11(3)--------->YAB1            <---------ATHB51 --------->ATHB12       ------->TEIL --------->ARR11(3)    --------->YAB1               --------->ICU4  <---------YAB1    --------->AtLEC2<---------ARR11(3) --------->TOE2(3)           <---------ATHB12    --------->ICU4 ---->GT1<---------ARR14(2)--------->ARR11(3)<-----------GT1     --------->WOX13(1)    <---------ATHB51   tattacatgcacatccgattaaaatctaacatcttctagaacattaatcacattatataatagaaaacaatcaataattattcattggaattattggtta  8107600                                                 ------------------------>ANAC81                                       --------->AHL20(2) ----------->GT1     <---------ATHB12     <-         <----------DOF2            ----------->GT1     ---------->DOF2<---------PCF2              -- ------>YAB1                       ----------->GT1  ---------->DOF2    --------->ARR14(2)         --- ------YAB1                    --------->YAB1   ---------->DOF2        <---------ARR14(2)      ------ -MYB46(3)                  --------->YAB1  ---------->DOF2     ---------->DOF2              --------   tcaaaacaaaactttatttccaaaaaccaagaataagaagataaaataaagaaagaaagaaagaaaaaaagagggtccccatcaatgtagtagagaagta  8107700                                 --------->ANAC46          <---------HSFB2a(2)  --------->ANAC58                                                   ---     <---------ZAT6            --------->ANAC46                                                 <---- --------AHL20(2)              --------->ANAC58                                                 <---- ------->AHL20(2) --------->ANAC58                                                              <---- ------>ICU4      --------->ANAC58                                                         --------->GLK1(2) --->AHL20(2)     --------->ANAC46       --------->GLK1(2)                                 <---------ARR14(2) --->GT1  --------->HSFB2a(2) ------->GAMYB            <---------At4g35610 <-------TEIL    --------->ARR14(2)   attaatagagttacagaaacaagcaaaaacaacacacaaaactaatctgtctctgtaagatgatgagattagagaagtgcatgaggctcggagaatcggc  8107800                       --------->ARR14(2)                       <---------ARR14(2)        <---------AHL20(2)   <----------DOF2   --------->ICU4  <---------At5g28300         <---------DOF5.7(2)   <---------YAB1  <---------LBD16           --------->DOF5.7(2) -------->HVH21   <-----------GT1           <----------DOF2                  <-----------GT1<-------- -----ANAC58 <---------AHL20(2)        <---------DAG2<----------DOF2     <------------------------ANAC81 -----ANAC58 --------->AHL20(2)        <----------DOF2       <-----------HVH21  <----------DOF2   <-- -----ANAC46--------->AHL20(2)      <---------ALFIN1<---------DAG2      <----------DOF2     ---------   gtgacattattcaattttattcacggttctactttggaccacttttctttaacgccttttgtttgtcactcgttctttttttctttctctcgattttatt  8107900         --------->TOE1(3)         --------->TOE2(3) <----------DOF2                       ------>ZmHOX2a(2)                           ------>ZmHOX2a(1) -AHL20(2)                             ====================================HOX2a_HOX2a ---------GT1                 --------->LBD16      <---------YAB1               ------>ZmHOX2a(1)<--- >AHL20(2)             --------->AHL20(2)         --------->TOE2(3) ------>ZmHOX2a(1)          ------   tcactttcgacccttaaactctccataaattccgaaactgatccctcaaaaacattattctatctctctccttcacgttctcctccttatcccttctata  8108000                                                                                                    x                                                                                                    x                                                                                                    <                                                                                                    x                                                                                                    x                                                                                                    x                                                                                                    <                                                                                                   <x                                                                                                   xx                                                                                                   xx                                                                                                   <x                                                                                                  xxx                                                                                                  xxx                                                                                                  xxx                                                                                                  xxx                                                                                                  xxx                                                                                                  xxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 XXXX                                                                                                 XXXX                                                                                                 xxxx                                                                                                 xxxx                                                                                                 <xxx                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 XXXX                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                 xxxx                                                                                                xxxxx                                                                                                xxxxx                                                                                                xxxxx                                                                                                -----                                                                                                xxxxx                                                                                                xxxxx                                                                                                xxxxx                                                                                                xxxxx                                                                                             <-------                                                                                           --------->At4g35610                                                                                        <---------At4g35610                                                                                        --------->At4g35610                                                                                   ------->PIF5 xxxxx                                                                                   <-------PIF5 xxxxx                                                                                   --------->DREB2C(2)                                                   <---------ANAC58                --------->DEAR3(1)                                                   <---------ANAC58               --------->DEAR3(2)-                                    --------->RVE1(1)                          <---------ZAT14 xxxxxx                                   --------->GLK1(2)       --------->At4g35610 --------->ZAT14 xxxxxx                                   --------->ARR11(3)   <---------At4g35610    <---------ZAT18 xxxxxx                             ----------->GT1    <----------DOF2    --------->ZAT14<---------LBD16xxxx ------AHL20(2)    --------->ANAC55(2)    <----------DOF2------>ZmHOX2a(2)     --------->ZAT18xxxxxxx ----->TBP   <<<<<<<<<TBF1  *TSS   <---------ARR11(3)  <---------ARR11(3)  <-----------RAV1(1)xxxxxxx   taaacactcgtcttcttcttcacttgatgaacagaaaaatctctctttctctttcttgatctgctacggtgaagtctatggtgcaccggcatctgatgaa  8108100         --------->ARR11(3)     --------->YAB1    <---------ZAT2    <------NtERF2   xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   ------>NtERF2  --------->ATERF1(2)  <---------ATERF1(2) xxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxxx>smallRNA(l2) xxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxx>smallRNA(s2) xxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxx>smallRNA(fl3) XXXXXXXXXXXXXXXXX>MIR167D XXXXXXXXXXXXXXXX>MIR167C xxxxxxxxxxxxxxx>smallRNA(l2) xxxxxxxxxxxxxxxx>smallRNA(s2) xxxxxxxxxxxxxsmallRNA(i) ------At4g35610 ----->At4g35610 ----->ZAT2 ------ZAT2===========================HOX2a_HOX2a xxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxx>smallRNA(l2) xxxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxxx>smallRNA(i2) xxxxxxxxxxxxxxx>smallRNA(i2) XXXXXXXXXXXXXXXX>MIR167A/B xxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                    < xxxxxxxxxxxxx>smallRNA(fl3)                                                                       -- xxxxxxxxxxxxx>smallRNA(le3)                                                                <-------- xxxxxxxxxxx>smallRNA(si3)                                                                <---------- xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                     <---------TOE1(2) xxxxxxxxxxxxxx>smallRNA(se3)                                                   xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxx>smallRNA(si3)                                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxx>smallRNA(si3)                                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxx>smallRNA(si3)                                                   xxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxx>smallRNA(se3)                                               xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxx>smallRNA(si3)                                                 xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxxxxxxx>smallRNA(le3)                                                 xxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxx>smallRNA(le3)                                                     xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxx>smallRNA(le3)                                                xxxxxxxxxxxxxxxxxxxx>smallRNA(l2) -->TEIL <---------ARR11(3)                                                    xxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxx>smallRNA(se3)                                               xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxx>smallRNA(i2)                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxx>smallRNA(s)                                                     <------ZmHOX2a(2)     -- xxxxxxxxxxxxxxxx>smallRNA(fl3)                                              <XXXXXXXXXXXXXXXXXXXXMIR167A/B --REM1(1) ------>ZmHOX2a(2)                                                 <XXXXXXXXXXXXXXXXXXXXMIR167C xxxxxxxxxxxxxxx>smallRNA(se3)                                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxx>smallRNA(si3)                                              xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----->NtERF2       <----------DOF2                                          xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxx>smallRNA(s2)               ----------->TGA1               --------->ARR11(3)     -- xxxxxxxxxx>smallRNA(s) <----------DOF2    --------->YAB1   <---------GLK1(1)xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxx>smallRNA(si3)    <-----------RAV1(1) <-------GAMYB          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxx>smallRNA(si3)------>ZmHOX2a(1)    <---------MYB46(3)      <---------ARR11(3)    <-- xxxxxxxxxxxxx>smallRNA(le3)   <----------DOF2      ----------->GT1         <XXXXXXXXXXXXXXXXXXXXXMIR167D xxxxxxxxxxxxx>smallRNA(se3)  --------->TOE2(3) <---------YAB1<------ZmHOX2a(2)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   gctgccagcatgatctaattagctttctttatcctttgttgtgtttcatgacgatggttaagagatcagtctcgattagatcatgttcgcagtttcaccc  8108200    <-----------HVH21   <-----------RAV1(1) ---------WRKY18(1) ------->WRKY38(1) ---GT1 <---------ALFIN1       <-----------GT1 -HVH21<---------SPL7  --------->TOE2(3)                           <----------DOF2 ------->WRKY12        --------->TOE1(3)                     --------->ANAC58                      -- ------->WRKY45 --------->HSFB2a(2)       <----------DOF2    --------->ANAC46                      <- -------MYB52(1)<---------HSFB2a(2)   <---------CCA1(2)      --------->ANAC58   --------->YAB1   <---   gttgactgtcgcacccttctataaaccctaaattttctctctatcttttttagtttgattttcaagacactttgtttctcaatcttcagtctgattttgt  8108300                                                                           ------>ZmHOX2a(2)                                                                          <---------At4g35610                                                                          --------->At4g35610                                                                         <---------AGP1                                                                         <---------ARR11(3)                                                                         --------->ARR14(2)                                                                         <---------ARR14(2)                                     --------->YAB1                     <---------CCA1(2)                                <----------DOF2               <---------ANAC46          <----------DOF2 <---------AHL20(2)                  <---------ANAC58                   <--- ------->At4g35610       <---------AHL20(1)      <-----------GT1   ------->TEIL               <<<<<<< --------At4g35610       --------->AHL20(1)      --------->ZAT6 <XXXXXXXXXXXXXXXXXXXXMIR2112-3P  <--- ------ZAT18            <---------AHL20(2)     <-----------GT1<---------ANAC58        <---------TOE2(3)   gagcttacttctctttctgaggctatatatatttctttttcataagaattttcactatattgttgtgtgtatgtggatctgaagaatttatgttttgtta  8108400                                                                                                -----                                                                                               XXXXXX                                                                                 --------->ARR14(2)                                                                                 <---------ARR11(3)                                                                                 --------->ARR11(3)                                   <------MYB83                                  <-----------ARR10                        --------->GLK1(1)                                        --------->ARR14(3)                        <---------GLK1(1)                                        <---------ARR14(3)           <---------ANAC58        <------MYB46(1)                               --------->GLK1(2)---           <---------ANAC58--------->TOE2(3)                             --------->ICU4      <------- ------TOE2(3)        <------ZmHOX2a(1)<----------DOF2     <---------AHL20(2)    <---------ARR14(2) <<MYB98   <---------AtLEC2--------->TOE1(3)             <---------AHL20(2) <---------YAB1 --------->YAB1 ------TOE1(3)   <----------DOF2  --------->MYB59  <---------ANAC46   <---------YAB1      <---------YAB1   gggttatagagttgcatgactttaggaaaccctaatttggtctttgacaaattgagtatatttttttgggttataaatatgaaaatcttcttatgatgaa  8108500  Previous    Next  AGI:  At3g22886.1    Description:  MIR167A; miRNA Range:  from: 8108028    to: 8108629    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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