Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------ARR11(3)                  --------->ARR11(3)                --------->ANAC58                --------->ANAC58                                             <---------ARR11(3)             --------->LBD16                                                 --------->ARR11(3)            --------->ANAC58                                         ---------->DOF2            --------->ANAC46              ----------->RAV1(1)       ---------->CDC5            --------->ANAC58     <-------GAMYB                    --------->TOE2(3)           <---------LBD16      <------MYB83 ------->GAMYB        --------->TOE1(3)        --------->REM1(1)       <------MYB46(1)                <---------ARR14(2) <---------ARR11(3)             <---------DEAR3(2)             --------->ARR14(2)             <------   caagttctctacatccgcaagctcttcagcaagtcggtagcatacaacagagtttgaacatagcaaaacctcagagcgaggtcttgtgtccagtttatgt  8088600                              <---------ZAT6                       ------>ZmHOX2a(1)                      --------->TOE2(3)     ---------->DOF2                     --------->YAB1       <---------AHL20(2)                    <<<<<<<<<ARR2        --------->AHL20(2)                                   -------                    <<<<<<<<<ARR1        <---------AHL20(2)          <---------DAG2        <---------                    <<<<<<<<<ARR2    <---------AHL20(2)              <----------DOF2    <---------ALFIN1 ---YAB1            <<<<<<<<<ARR1 --------->MYB52(2)       ---------->DOF2            <-----------GT1   ttgaatcggtgatcaaaacacaatcctaaacagtgttagttaatttaaaagcttcaatagcgaaagacttactttttgtttttggtttctacacttttat  8088700                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                               ------                                                                  <---------YAB1              <------ZmHOX2a(2)                                                                ----------->GT1              --------                              <-----------GT1           --------->YAB1                       --------                          <----------DOF2             --------->ARR11(3)<---------TOE2(3)    <-------                       ------->TEIL                   <---------ARR11(3)<---------YAB1       --------                    <---------REM1(1)          ----------->GT1--------------------->WRI1     <-------             --------->ARR14(2)            --------->ATHB12 <---------ARR11(3)              --------- -->YAB1     --------->ARR11(3)          <---------WOX13(1) --------->ARR11(3)              <-------- -DOF2       <---------ARR14(2)        --------->ATHB12<---------YAB1<---------YAB1    --------->CCA1(2)   aagtttactaatgcagaacttgatgaagcttttttctgaattcattgattagtgaatatcattatcttgttattatcgtagacaaattgatatgagatcc  8088800     --------->YAB1    <---------YAB1  <---------ICU4  --------->YAB1  -------->HAHB4 --------->ICU4 <---------ATHB51 -->ZmHOX2a(1) ---->TOE1(3) ---->TOE2(3)                                                                --------->ARR14(2) >ZmHOX2a(2)                --------->ZAT14                                  <---------ARR11(3) ->AGP1                --------->MYB46(3)                                    <---------ARR14(2) ->ARR14(2)          --------->AtMYB61                                       --------->ARR11(3)   --- --ARR14(2)         --------->MYB46(3)                                      --------->CCA1(1)   ----- ->ARR11(3)   --------->AHL20(2)  ---------->DOF2                  <---------YAB1        --------->ALFIN1 --ARR11(3) ------>MYB46(1) <---------ZAT14                       <---------ARR11(3)    <-------MYC3 >GLK1(1)   ------>MYB83--------->AtMYB61          ---------->DOF2--------->ARR11(3)    ------->MYC3 -GLK1(1) <---------MYB59   ---------->DOF2  ---------->DOF2<-----------GT1 --------->RVE1(1) <------ZmHOX2a(1)   ttaattatgataccaaataaaaaccaccactaaagtgaaagaaaaaacaaagtcaaagtaatatacaatatcatacaaatatctgcaaaacgtggaggaa  8088900                                            --------->DAG2                                           ---------->DOF2                                       <----------ID1                                       --------->ANAC58                                <---------MYB46(3)                    <---------GLK1(2)  --------->ANAC58                            --------->ALFIN1 -------->GT1     <---------YAB1     --------->MYB52(1)      <-----------GT1---------->DOF2      ---- ----->DOF2<--------ATHB1       ---------->DOF2    <------------CBF       <---------YAB1   <---------WRKY12   aagaaaaatcgaataattcgatgattctctctatcaaagaaacgaaaaagtcgtattgaagttttgccatttgtttataaaagaagtggctgttcaacga  8089000                                                       <---------HSFB2a(2)                                                       --------->HSFB2a(2)                                                      ------>ZmHOX2a(2)                           <--                                                      <---------LBD16                            <---             <---------DAG2                       ----------->HVH21                            ------             <----------DOF2                    ----------------->AGL1                        <------          <-----------GT1                       <---------ANAC58                              <------          *TSS                            <---------At5g28300                                 -------          <---------AHL20(2)<-----------RAV1(1) <---------ANAC46       <-----------RAV1(1)    ------- ---------->DOF2           ------>ZmHOX2a(2)    <---------ANAC58>>>>>>>>>TBF1            --------->ANAC58 ----->GLK1(2) <-----------GT1           <-----------GT1     >>>>>>>>>TBF1  <------NtERF2--------->ANAC58   ttctaaagtcatttactttaccattttgatctgttgctctgtttcactgtgcgtgatcgggaagaagaagaaaatgttggcgattttcgacaagaacgtg  8089100                                                                    <---------SPL7                 <-                                                                  --------------->AtSPL3          ---                                                              <---------ANAC58                  ----- -------ANAC46                       ------>ZmHOX2a(2)        <---------ANAC58                  <---- ---NtERF2                         <---------ARR14(2)        <-------TEIL                   ------>ZmHOX2a(1) --->ALFIN1                        --------->ARR14(2)     <------MYB46(1)                   ========= -MYC2                           <---------MYB46(3)      --------->MYB59                    ========= -MYC3                 --------->WRKY18(1)   <---------ZAT18--------->ARR11(3)              <-------- >MYC2                <-----------HVH21 <---------MYB52(1)<------MYB83           ------>ZmHOX2a(1)<-- >MYC3   --------->LBD16        --------->ALFIN1   ---------->DOF2--------->HSFB2a(2)     -----------   gcgaaaacacccgaggctcttcagggtcaagagggtggatcggtttgtgctcttaaagataggttcttgccgaaccatttctcctctgtttatcctggtg  8089200                  ------>ZmHOX2a(2)                 --------->HSFB2a(1)                <---------ARR14(2)                --------->ARR14(2)                <---------ARR11(3)                <---------ARR11(1)        --------->WOX13(1) ----------HVH21<-----------ARR10<---------ANAC58 ------>bZIP60(1)--------->GLK1(1) ---->At4g35610 --------->ARR11(3) -----At4g35610<---------CCA1(2) <---------ANAC46 =======================HOX2a_HOX2a ========================HOX2a_HOX2a                                <---------TOE2(2)           <---- ---RAV1(1)    <---------ARR14(1)<---------ANAC58                   <---------TOE1(2)        <------- -------bZIP60(1)<------ZmHOX2a(2)          <---------HSFB2a(2)     --------->LBD16         ------>ZmHOX2a(1) >RAV1(2)   <---------LBD16 --------->ATHB12--------->HSFB2a(2)    <-----------RAV1(2) --------->KAN4(2)   ctgtcaccatcaatctcggatcttctggtttcattgcttgctctctcgagaaacagaaccctcttcttcccaggttttgtacaatagtttattcctcagg  8089300                                                                                         <---------ARR14(2)                                                                            --------->GLK1(1)                                                                            <---------GLK1(1)                                --------->CCA1(2)                           --------->CCA1(2)                               --------->ARR14(2)                          <---------ARR14(2)                               <---------ARR14(2)                          --------->ARR14(2)                         <---------YAB1                 <---------ANAC46  <------ZmHOX2a(1)                       --------->CCA1(2)                <---------ANAC58<---------TOE1(3)--------->GLK1(2)                      <---------ARR11(3)          <-----------GT1--------->ARR11(3)      ------->TEIL         <<<<<<<<<TBF1--------->ARR14(2)    <---------TOE2(3)    <---------ARR11(3)     <---------GLK1(2) --ZmHOX2a(1)      ------>ZmHOX2a(1)    --------->YAB1  <---------ANAC58<---------TOE2(3)--------->ARR14(2) ----RAV1(2)       <---------HSFB2a(2)  --------->TOE2(3)       --------->YAB1     <-----------GT1   atgatgttttcttcttctgtcctagatatgagagatttgctatcttaatgtttcactggcttgcaaagatagtttaggatatgtttcactgaatctgaga  8089400                                                                ----------->GT1             <-----------RAV1(1)                <---------ARR11(3)            ------>ZmHOX2a(2)                  <---------CCA1(2)<---------YAB1     --------->GLK1(1)             <---------ICU4               <---------ANAC46    <---------ARR11(3)            --------->ICU4--------->ARR11(3)                            <------    --------->ARR11(3)    <---------YAB1----------->GT1         --------->ICU4            <------ZmHOX2a(1)  <---------TOE2(3)  <---------YAB1--------->YAB1     <----------DOF2      --------->ALFIN1 ---------   gattgagatatcgatctgttgttatgttttgatggaataatgaagttatatatctactttgttgtgatgtttaaaatgtgttgaaactggaaggatgtga  8089500  Previous    Next  AGI:  At3g22845.1    Description:  emp24/gp25L/p24 protein-related. similar to emp24/gp25L/p24 family protein [Arabidopsis thaliana] (TAIR:AT3G07680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71233.1); contains InterPro domain emp24/gp25L/p24; (InterPro:IPR000348); contains InterPro domain GOLD (InterPro:IPR009038) Range:  from: 8087314    to: 8088754    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g22850.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G43830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71784.1); contains domain PTHR11772 (PTHR11772); contains domain G3DSA:3.60.20.10 (G3DSA:3.60.20.10); contains domain SSF56235 (SSF56235) Range:  from: 8089010    to: 8090477    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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