Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       --------->ANAC55(2)                                                                     <---------ANAC55(2)                                                                     --------->ANAC46                                                              ----------->GT1                                                           <------------CBF --------->ZAT2                                                    <---------AHL20(2)      <---------At4g35610                                                <---------AHL20(2)   --------->ANAC55(1) -------->AHL20(2)                             <---------AHL20(2)  --------->ZAT6        <-----------GT1 ---------AHL20(2)                     <------------MYB.PH3(1)--------->YAB1--------->At4g35610 ---ANAC58                         <---------ARR11(3)     --------->ATHB12--------->MYB46(3)   <----- ---ANAC58             <---------YAB1--------->MYB52(1)  <---------YAB1 --------->MYB52(1)  ---------   aattaatctagctcaagttttagtgatttttgttgaagataactgattttttattttttttcattggtaacacttaacagctgaattagttttactgatt  7950700                                                       <---------YAB1                                                     -------->HAHB4                                                     <---------ICU4                                                     --------->YAB1                                                    --------->ICU4                                                  <---------ICU4  --------->AHL20(2)                     <---------ICU4               --------->YAB1  <---------AHL20(2)                  <---------ICU4                 --------->ICU4--------->YAB1                 --------->ICU4                  --------->AHL20(2)                 <---------ATHB51                <---------AHL20(2)                 <---------AHL20(2)     --------->ARR11(3)   <---------YAB1                      >>>>                 --------->AHL20(2)     <---------ARR11(3)   <---------AHL20(2)           <---------AHL20(2)      --------->ARR11(3)                --------->ARR14(2)   --------->AHL20(2)   --------->ARR11(3)      <---------ARR11(3)    --------->DOF5.7(2)  <---------ATHB12 <---------AHL20(1)      --------->AHL20(1)      --------->GLK1(2)    <----------DOF2       <---------ATHB51 --------->AHL20(1)>>>>>>>>>RAP2.2-- -----DOF2      <---------AHL20(1)     --------->CCA1(1)    --------->YAB1        <---------ARR11(3)- ------>AGL15   --------->AHL20(2)     --------->RVE1(1)  ------->TEIL <-----------GT1    --------->AHL20(2)   ttaggcaaaatctagcaaaataattaagactttaactgaaaatatcttcaaataattatgaatattaataaaataactaaacaatatctaaataaaatag  7950800                                                                           <---------AHL20(2)                                                                           <---------AHL20(1)                                                                           --------->AHL20(1)                                                                       <---------AHL20(2)                                                                       --------->AHL20(1)                                                                       --------->AHL20(2)                                        <---------AHL20(2)            <---------AHL20(2)                                        <---------ICU4                --------->AHL20(2)                                       --------->AHL20(2)          --------->AHL20(2)                                    --------->AHL20(2)            --------->AHL20(2)                                    <---------AHL20(2)            <---------AHL20(2)                                   --------->AHL20(2)          <---------AHL20(2)                   < >>>>>GATA-1                     <---------ICU4               --------->AHL20(2)<-----------GT1     < -------->DOF2                  --------->ICU4               <---------YAB1--------->AHL20(2)      -- -------->DAG2            --------------->AtSPL8            --------->AHL20(2)  --------->ARR11(3) <-   ataaagttatccaatagtctaattaagtcttgtactaattaataaatactaatataaactaatattatataaattaattaattatctagtcaatgtatgg  7950900                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                 ----                                                                                           --------->AHL20(2)                                                                                           --------->ATHB12                                        --------->YAB1                             ----------->GT1<--                          <---------ANAC46      ------>MYB83                  ---------->DOF2  <-----                          <---------ANAC58      ------>MYB46(1)             ------->GAMYB  <---------AHL20(2) ------MYB83              <---------ANAC58 <-----------GT1               --------->MYB52(1)--------->ATHB51 ------MYB46(1)    <--------P----------->HVH21<---------MYB59         --------->ANAC55(2) <---------AHL20(1) ------->MYB59<---------AtLEC2         <---------YAB1              <---------MYB52(1)     --------->AHL20(2) --------AtMYB61 --------->ATHB12 ----------->GT1       --------->YAB1<---------ANAC55(2) <---------AHL20(2)   tttggtcttagttgatgcatggttgatgtcttggaccggttataataaccaaactaaatcaaaatttcagttacttaaccgaaagtagtcaaattatttg  7951000                        <-------GAMYB                       ----------->GT1                       <------MYB83                       <------MYB46(1)          ------->TEIL--------->MYB59          --------->MYB52(1)<---------YAB1 -------GAMYB       <---------MYB52(1) --------DEAR3(2) <---------DEAR3(2) --------->GT1    <------MYB46(1)                                            ---------->DOF2 --------MYB46(3) <------MYB83                 --------->At4g35610        --------->GLK1(2) ------>ETT(1) <---------ARR14(2)    --------->GLK1(2)         --------->At4g35610              <---- ------>ID1    --------->ARR14(2)   --------->ARR11(3)        *TSS    --------->YAB1  <---------CCA1(2) -------DREB2C(2)--------->MYB59    <---------GLK1(2)       <---------MYB52(1)    <-----------HVH21 ------RAV1(1) <---------MYB52(1) ----------->ARR10    --------->GLK1(2)  <-----------ARR10     <----   tcggttataatgtaccggttcggttcggttataagtaagattctgcattagctcgagattccattagctcaaggagaatcaaagcgtcgtctcttgttcc  7951100                                  --------->LBD16                                  ------>NtERF2                                  <------NtERF2                    <---------GLK1(2)                                 --------->ANAC46                 --------->At4g35610                                 --------->ANAC58                 <---------At4g35610                                 --------->RAP2.6(2)         --------->At4g35610                               --------->ATERF1(1)           <---------At4g35610                              <---------SPL7                 ------>NtERF2                              <-----------HVH21           --------->LBD16                             <---------ANAC58             <---------ATERF1(1)                             <---------ANAC58             ------>NtERF2                         ----------->RAV1(2)             <---------ALFIN1                       <---------ANAC58                  --------->DEAR3(1)                       <---------ANAC58                  --------->ANAC46       ----------->RAV1(1)<---------DEAR3(1)           ------>ZmHOX2a(1)       ==============================RAV               <---------ATERF1(1)    ------>NtERF2 <---------At4g35610                 <---------ALFIN1       <---------MYB59 --------->LBD16  --------->ZAT2 --------->ANAC58   ------>ZmHOX2a(1)        --------->AtMYB61------- --------->At4g35610   <---------ANAC46    --------->ANAC58 --------->DEAR3(1)            --------->ATHB12 <---------At4g35610 <-----------HVH21     --------->ANAC58 --------->RAP2.3(2)         <----------DOF2 -----ANAC58      --------->At4g35610      --------->ANAC46--------->RAP2.3(1)   --------->ZAT2     < -----ANAC58      <---------ZAT2--------->SPL7  <---------ALFIN1  <---------ZAT2 <---------ZAT2     <   ttccgctgccaacaaaatggagctgtcgtctgcgtccgccatattaagccactcctcctccgccgctcagcttctcagacctaagctcgggtttattgat  7951200                    ===================HOX2a_HOX2a                                     <---------ATHB12                    ------>ZmHOX2a(2)                                         <---------GLK1(2)       <-----------HVH21                                 <---------ANAC58    <---------At4g35610     ======================HOX2a_HOX2a                   <---------ANAC46    --------->ZAT2     ------>ZmHOX2a(1)                         ------>ZmHOX2a(1)<---------GLK1(2)     --------->GLK1(2) -->ATHB12          ==================================HOX2a_HOX2a  --------->TOE2(3) --------->WOX13(1) ---------ANAC58--------->ICU4      <<<<<<<<<TBF1        <---------ANAC58    <---------ZAT2 ---------ANAC58<---------YAB1  ------>ZmHOX2a(1)       <---------LBD16      --------->At4g35610   ttgcttcctcgtcgagcgatgatcgtttcttctccttcttcttcgcttcctcgatttttgcggatggaatctcaatctcagcttcgccaatctatctctt  7951300                                                                                      <-----------GT1                                                                                  <---------AHL20(2)                                                                            <---------WOX13(1)                                                                          <---------ICU4       ------              <<<<<<<<<TBF1                                               --------->ATHB12  <--------           <<<<<<<<<TBF1     <------MYB83            <---------ANAC46    <---------YAB1     ---------        <<<<<<<<<TBF1        <------MYB46(1)--------->HSFB2a(2)          --------->ICU4     <--------  <---------At4g35610       --------->MYB59 <---------HSFB2a(2)<---------At4g35610<---------YAB1    -   gctctgcttcttcttcttcttctatggcattaggtcagttttgggtctagacatggctgagattaagctcatttcatgattgatattatttctgttcact  7951400 --------->DAG2           ----------->GT1                                          <---------AHL20(2) --->ANAC46              --------->MYB59                                          <---------AHL20(2) -ZAT14                <---------ATHB12                                           --------->AHL20(2) >ZAT14       <---------AHL20(2)                 ----------->GT1   --------->HSFB2a(1)   <---------AtLEC2 -ZAT18<------NtERF2 --------->WOX13(1)    ---------->DOF2        ------->TEIL--------->ICU4<------MYB83 --------->DOF2   --------->TOE2(3)     ----------->GT1---------->DOF2        <---------YAB1<------MYB46(1)   caaaaagtcgtcgtttttaatctcaatcaggtagaattggagaagtaaagagagtaacaaaggaaacgaatgtttcagtgaagattaatttggatggtac  7951500                                  <---------WRKY18(1)                                 --------->WRKY12                                 --------->WRKY38(1)                               <---------ANAC58                               <---------ANAC58                      <---------GLK1(1)                                <----------DOF2                      --------->GLK1(1)                               --------->TOE2(3)               >>>>>>>ZML2 <----------DOF2                     <----------DOF2  <---------ANAC55(2)        <---------ARR14(2)<---------ANAC58               <----------DOF2        --------->ANAC55(2)        --------->ARR14(2)<---------ANAC58         ---------->DOF2 <-----------GT1 ------->TEIL   tggagttgcagatagttctagtggaattcctttccttgaccatatgttagatgtaaagtctttgcctttaaacctttttgtcatgtatttttgatttctt  7951600  Previous    Next  AGI:  At3g22425.1    Description:  IGPD; imidazoleglycerol-phosphate dehydratase. Identical to Imidazoleglycerol-phosphate dehydratase 1 [Arabidopsis Thaliana] (GB:P34047;GB:Q8VYM1); similar to imidazoleglycerol-phosphate dehydratase, putative [Arabidopsis thaliana] (TAIR:AT4G14910.1); similar to imidazoleglycerol-phosphate dehydratase, putative [Arabidopsis thaliana] (TAIR:AT4G14910.2); similar to imidazoleglycerol phosphate dehydratase [Thlaspi goesingense] (GB:AAC83458.1); contains InterPro domain Imidazole glycerol-phosphate dehydratase; (InterPro:IPR000807) Range:  from: 7951062    to: 7953230    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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