Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ARR11(3)                <---------AHL20(1)                <---------ARR11(3)             <---------AHL20(2)             --------->AHL20(2)           <---------YAB1                                                        --------->ICU4        --------->AHL20(2)                   <---------YAB1          --------------->AGL15        <---------AHL20(2)                <---------YAB1             ================================ ------->AHL20(2)                       ----------->GT1              <---------------AGL15   aaaatatagttttattaatatatcccaaaactatacatgaaattgttattcatgtatagactgactcaaaacaaaatttagtaatgtttttttttttgta  7926500                                                           <---------YAB1                                                      --------------->AGL15                                                     <---------YAB1                                            <---------AHL20(2)                                           --------->AHL20(2)                    --------->TOE2(2)                                           <---------AHL20(2)                  <---------TOE2(3)                                           <---------ARR11(3)           <-------GAMYB                ---------->DOF2            --------->ARR11(3)   <---------AHL20(2)               --------->AHL20(2)          <---------AHL20(1)   --------->AHL20(2)               <---------AHL20(2)          --------->AHL20(1)  <---------AHL20(2)--------->TOE1(2)              <---------AHL20(2)          --------->AHL20(2)<---------AHL20(2)<---------DOF5.7(2)          <---------AHL20(2)            --------->AHL20(2)<---------AHL20(2)--------->DOF5.7(2)         --------->AHL20(2)     <----------DOF2    <-----------GT1   <-----------GT1----------->HVH21 =====================================================================MADS_MADS<---------TOE1(3)    <   aaactctacgttttaatttaaagactaaattcaactttgcaaaaatatatttgttactatttttatttatttttcgttgttaacgtatgacaactagttg  7926600                           <---------ICU4                          <---------ARR11(3)                   --------->ZAT14                   <---------ZAT18              <---------ZAT14              <-------TEIL<---------AHL20(1)              --------->ZAT14 <-----------GT1             <<<<<<<<<<<<<<<<<LFY--------->TOE2(3)            <----------DOF2      <-----------GT1     --------->AHL20(1)             <---------At4g35610     --------->AHL20(2)   --------->AHL20(2)        <---------GLK1(2)                <-------TEIL <-- ---------ATHB12   <---------ZAT14       <-------TEIL <-------TEIL         --------->AHL20(2)<-------   taatcaatttactaggtacagtggacaaaatattacattaacatccatatttcagattcatctccttttctccaaaataaaacaagattcaactcctttt  7926700                                                                     <---------ICU4              <---                         <---------AHL20(2)                         --------->AHL20(2)         <-----                        <---------AHL20(1)                          <---------AHL20(2)       <-------                        --------->AHL20(1)     <---------ANAC46     --------->ICU4           -------- --------DOF2   --------->At5g28300  --------->ANAC46          ----------->GT1               <------- ---DOF2        <-------GAMYB --------------->AtSPL3         ---------->DOF2  <---------ZAT6 --------   ctttttctgaataaacacggttgatatatatttcagtacataccacttggtgtatagttttgggaaagaaaaaattactagagttggagaaagaatttat  7926800                                                                                                   --                                                                                                  <--                                                                                                -----                                                                                               <-----                                                                                           --------->KAN4(2)                                                                                          <---------HSFB2a(1)        ----------->GT1                     <-------TEIL                                  <---------HSFC1(2) ------REM1(1)                  --------->AGP1    ----------->TBP                         <---------KAN4(1) -------CBF                    --------->At4g35610<---------AHL20(2)                      --------->KAN4(1) --AHL20(2)                    <---------At4g35610--------->AHL20(2)  <---------ZAT6      --------->HSFB2a(1) ->AHL20(2)               <---------ZAT14   ------------>CBF     <---------ARR14(2)      <---------KAN4(2) --AHL20(1)          <---------YAB1  <---------STY1(2)           --------->ARR14(2)   *TSS--------->HSFC1(2) ->AHL20(1)      <------------CBF    --------->STY1(2)           <---------GLK1(2)  ---------->DOF2<-   tgtagcaaaaatgtaaaaccattgtgactgttcagctctagctagattcaatataaatatagtatcagatttgtgttatatgcataaaaagaacattctt  7926900                                     <-----------ARR10                   <---------ANAC58 ------->YAB1                        --------->GLK1(2)                   <---------ANAC58 -------YAB1                        <---------GLK1(2)                <----------DOF2 ---->YAB1                     --------->YAB1                       <---------DAG2           <------- ----YAB1                    --------->ANAC58                    <-----------GT1             -------- --------ICU4                --------->ANAC58                 <----------DOF2<---------GLK1(2) ------   ataatcacacatctctctctcttcattccccaagcatagaatctctccctctctatctatctctctttcaccttttcttgattcttactcagagaaaatt  7927000                                       <------ZmHOX2a(2)                          <---------DDF1------>ZmHOX2a(2)                         --------->DEAR4(1)                         --------->DREB2C(2)                         --------->DEAR3(1)                         --------->At1g77200                    <---------ALFIN1  <---------ARR11(3)    <---------AHL20(1)  --------->DEAR3(2)     <-----------HVH21     <----------ID1    <---------ARR11(3)--------->ANAC46--------->ARR11(3)      ------------------------>ANAC81    --------->AHL20(1)<---------ALFIN1--------->AGP1         --------->MYB52(1) --HSFB2a(1)       ------>ZmHOX2a(2) <---------GLK1(1)   --------->ANAC58                 --------->ARR11(3) ->HSFB2a(1)     <---------ARR11(3)  --------->GLK1(1)   --------->ANAC58                 <---------ARR11(3) --->GLK1(2)   --------->ICU4       ----------->ARR10 --------->TOE1(2)               <------ZmHOX2a(1)   ctgcaatatatatcgccatgatccacaccgacatcgcagagatcttatgcgtcaaacccaagacaacgaagaagacaaaaacaatggaggaagatgtcaa  7927100                                               --------->ARR14(2)                                               <-----------ARR10                 --------->CCA1(2)             --------->GLK1(2)          <---------ANAC58              <---------YAB1                  <---------GLK1(2)           <---------ANAC58    -------      ------>NtERF2           <---------MYB46(3)                    <---------MYB52(1)     <---------     --------->DEAR3(1)<------ZmHOX2a(1)   >>>>>>>>>TBF1     ---------->DOF2            ------>ZmHOX2a(2)   gaagacgacgacgatgaagatagaaggagaagttgttgtgatgaagaagaatctccttgatttcaaagacgttatggcttctcttcttgatcgtgtcaat  7927200                                                 --------->ARR14(2)                                               --------->ANAC46                                            --------->MYB52(1)                                            ------>MYB46(1)                                            ------>MYB83                                           --------->MYB55(1)                                          --------->DEAR3(1)                                          <---------MYB111(2)                                          --------->AtMYB61                                          <---------MYB46(2)                                          <---------MYB55(2)                                          --------->MYB46(3)                                          <---------ALFIN1                                  --------->ZAT2 <---------ARR14(2)                          --------->ANAC46<---------MYB111(1)                          --------->bZIP60(2)  ----------->HVH21            <---------ANAC58      --------->At4g35610                        ----------->HVH21           <------NtERF2<---------ALFIN1 --------->MYB46(3)                  --------->ANAC46 <----------DOF2<---------CCA1(2) <---------At4g35610--------->LBD16     <-----------GT1 -->WOX13(1)<---------ANAC58   <---------At4g35610 <---------LBD16    <----------DOF2               - --HVH21 <---------DEAR3(1)--------->AtMYB61-------->P            <----------DOF2   <---------MYB52(1)   gagcttcttggtcgtcgtgtctctctccacctcatcagctctcaccaacccgacccgggtaacccattctttctttaacccgacccgttatcaaatccat  7927300                                                     <---------ZAT14                                       ----------->GT1                                       <---------MYB46(3)         --------->ATHB12           <----------DOF2  --------->ZAT14    <---------YAB1    --------->ARR11(3)         <---------ICU4    <-----------GT1--------->ATHB12    <---------ARR11(3)        <---------ATHB12--------->YAB1   <-------TEIL               ----------- --------->DOF2         --------->TOE2(3) >>>>>>>>>GT-1    <---------TOE2(3)            ----------->GT1   cttaaagttcttgattactctgtttttcttaaatcattctttggttaatagtcactatactaagattcattgttgttataaaccatgatgttgtgacaaa  7927400  Previous    Next  AGI:  At3g22400.1    Description:  LOX5; lipoxygenase. similar to LOX1 (Lipoxygenase 1), lipoxygenase [Arabidopsis thaliana] (TAIR:AT1G55020.1); similar to lipoxygenase, putative [Arabidopsis thaliana] (TAIR:AT1G72520.1); similar to LOX3 (Lipoxygenase 3), iron ion binding / lipoxygenase/ metal ion binding / oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Arabidopsis thaliana] (TAIR:AT1G17420.1); similar to lipoxygenase [Fragaria x ananassa] (GB:CAE17327.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17595.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71146.1); contains InterP Range:  from: 7926886    to: 7931358    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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