Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <------ZmHOX2a(1)                            --------->ZAT2                           --------->LBD16                          <---------LBD16                                               --------->YAB1                          <-----------RAV1(2)                                           --------->TOE2(3)                  --------->ZAT6                                 <---------YAB1        <---------YAB1                 --------->ZAT18                              <---------YAB1          --------->ARR11(3)                 <---------ZAT18                            <---------ICU4            <---------ARR11(3)                 <---------ZAT14                 --------->AHL20(1)                 <---------YAB1           ----------->RAV1(1)       <---------YAB1        <---------YAB1        <---------YAB1       --------->ZAT18 --------->ANAC46   <---------ZAT18  --------->ICU4        <---------AHL20(2)       <---------ZAT18-------->P     <---------AHL20(2)   <---------TOE2(3)    <---------ICU4 ---WRKY38(1)    --------->ZAT14  <----------DOF2<---------ARR11(3)        --------->AHL20(2) ---HVH21  ===========================RAV --------->ZAT18--------->YAB1    <---------AHL20(2) <------   cgcgattagtggacaacagtacactaccccaggagcctttttattgcacaatatactattgatgattatttttagatttaaatattattatcttaatctt  7912500                           <---------AHL20(2)                          <---------AHL20(2)               <---------AHL20(1)               --------->AHL20(2)                                  --------->AHL20(1)               --------->AHL20(1)                                  <---------AHL20(1)               <---------AHL20(2)                                  <---------AHL20(2)           <---------AHL20(2)                                      --------->ARR11(3)          <-----          <---------ARR11(3)                           ---------->DOF2                         <-----          --------->AHL20(2)                         <---------ZAT14             --------->AHL20(2)          --------->ARR11(3)                 <---------HSFB2a(2)<---------AHL20(1)       --------->ANAC58          <---------AHL20(2)                 --------->HSFB2a(2)--------->AHL20(1)       --------->ANAC58          <---------AHL20(1)                 --------->HSFC1(1) --------->AHL20(2)       --------->ANAC46   <----------DOF2    <------------------------ANAC81--------->ZAT14         ----------->GT1   <----- ---ICU4  --------->AHL20(1)                 <---------HSFC1(1) <---------AHL20(2)      <---------LBD16   tccgactttcaatatattttattgtttttttatttgtttgtttatttctagacagtgcaaagtcaataaaatattggtagcgataatatagacggaagcg  7912600                          <---------GLK1(2)                         --------->At4g35610                         <---------HSFC1(2)                         <---------ZAT2                         --------->HSFC1(2)                         <---------At4g35610                         <------NtERF2                    --------->ALFIN1                    ----------->HVH21                   <-------MYC3                   <-------PIF5                   ------->PIF5                   -------->ABF1                   <-------MYC2                   ------->MYC3                   ------->MYC2                   ------->MYC4                   <-------MYC4                  ======================================MYC_MYB                  >>>>>>>>>>AtMYC2                  >>>>>>>>>>ABI5                  <---------TGA1a                  <---------bZIP60(2)                                    <---------ARR14(2)                  --------->ANAC55(2)                                    --------->ARR14(2)                  >>>>>>>>>>HY5                              <---------AHL20(2)                  --------->O2                            --------->AHL20(2)                  <---------O2                           <---------AHL20(2)                  --------->TGA1a                        --------->AHL20(2)                     <----  <---------bZIP60(1)    <---------HSFB2a(1)            <---------AHL20(1)               --------->YAB1  --------->bZIP60(1)    --------->HSFB2a(1)    ------->GAMYB<---------ICU4              --------->AHL20(2) ----ANAC58       <---------ANAC55(2)          --------->ZAT6--------->AHL20(2)        --------->AHL20(2) ----ANAC58      >>>>>>>>>>>>AtMYC2--------->YAB1       --------->AHL20(2)         --------->LBD16 ----ANAC46  ----------->HVH21    <---------AHL20(2)   --------->YAB1    ------->TEIL --------->YAB1   tgtgatgtcaaactcttgacacgtggcagcttctgtttaataactggtaacagtccaaaataattttttcacatgaatccgactccgaaaataatattct  7912700                                                                            ------>MYB83                                                                            ------>MYB46(1)                                                                            <---------LBD16                                                                          --------->TOE2(2)         -                                                                   <---------PCF2                   <                                                                  <------MYB46(1)                  <-                                                                  <------MYB83                   <---                                                                 <---------MYB46(3)             <----                                                   --------->GLK1(1)    -------->P              -----                                                  <---------ARR11(3)    ------>MYB46(1)         <----                                                  --------->ARR11(3)    ------>MYB83            -----                                            --------->YAB1      --------->ALFIN1               <-----                                      --------->YAB1          <---------ANAC58              ---------                                     <---------YAB1<---------GLK1(1)   ------>ZmHOX2a(1)    <--------              <---------AHL20(2)    <---------ARR11(3)        <---------ANAC46    --------->At4g35610             <---------AHL20(2)     --------->ARR11(3)        <---------ANAC58    <---------At4g35610     ----------->GT1               --------->CCA1(1)    <---------YAB1<---------MYB59       <-------- ------DOF2  --------->AHL20(2)    --------->RVE1(1) <---------YAB1--------->TCP15(1)       ---------   tttaaaaccgaaaaattaaatgttatcaaatactaaaatatcataacaataagatatcatttttgagtgggtcctacctacggatgctgactaataaaat  7912800                                    -------->HAHB4                                    --------->YAB1         ---------->DOF2         --------->ANAC55(2)     --------->YAB1           --------->AHL20(2)         <---------ANAC55(2)   --------->AHL20(2)        <---------------AGL15 ---------->DOF2            --------->AHL20(1)        --------->AHL20(2) -------->AHL20(2)          <---------AHL20(2)        <---------AHL20(2) ---------AHL20(2)          --------->AHL20(2)       --------->ICU4                    <---------AHL20(2) --------YAB1               <---------AHL20(1)       <---------YAB1                  <---------YAB1 ------ICU4              --------->YAB1            <---------ICU4                  --------->YAB1 -----ATHB51          --------->YAB1<---------ICU4--------->ICU4                   <---------ICU4 ---->ICU4           --------->AHL20(2)           <---------AHL20(2)              <---------YAB1 <--- -----AHL20(2)       <---------AHL20(2)           <---------ATHB51              <---------AHL20(2)--- ---->AHL20(2)      <---------AHL20(2)          --------->YAB1                 <---------AHL20(2)---- ----AHL20(1)       --------->AHL20(2)      --------->At5g28300            <---------MYB52(1)   <---- >AHL20(1)          <---------AHL20(1)     <---------MYB46(3)         --------->MYB52(1)        ----- -AHL20(1)          --------->AHL20(1)     ----------->GT1<---------AHL20(2)   --------->AHL20(2)<--- -AHL20(2)      <---------AHL20(2) --------->ICU4 --------->AHL20(2)  ------------>MYB.PH3(1)   <---- >AHL20(2)      --------->AHL20(2) <---------YAB1<---------AHL20(1)  --------->RVE1(1)--------->AHL20(2)   aattaaagaatacgttttttaatttaataataaaataataatcggtggtaaaataattaataaaagaagaaatatcggttatttattattatatgcgaga  7912900                                                        <---------MYB46(3)                                                      <---------MYB52(1)            *TSS                                     <-------GAMYB        ------->GAMYB           ----------->GT1     <---------MYB46(3)     --------->MYB52(1)     --------->ANAC58    ----------->HVH21                  ----------->GT1  --------->YAB1            --------->ANAC58  <---------ANAC58                 <---------YAB1 ---ZmHOX2a(2)          <-----------HVH21     <---------ANAC58                 --------->ICU4 --->ZmHOX2a(2)    --------->ARR14(3)       <---------ARR14(2)             --------->At5g28300    <-- ----->GLK1(1)     <---------ARR14(3)       --------->ARR14(2)           <---------DEAR3(1)       --- -----ARR14(3)     <---------GLK1(2)       <---------CCA1(2)           --------->MYB52(1)        <--- ---->ARR11(3)     <---------ARR11(3)    <---------ANAC58             --------->DEAR3(1)         ---- ------GLK1(1)     --------->ARR11(3)    <---------ANAC58             ----------->HVH21          <--- -----ARR11(3)   ----------->ARR10       <---------ANAC46            --------->DEAR3(2)         <----   tctcttataacggagggccaagattttgtcacgctggtatatagcgtatcgtgaccgttggatgtattcacaccgacggtgaagattgagaaaatgtttt  7913000        --------->CCA1(2)       <---------ARR11(3)       --------->ARR14(2)       --------->ARR11(3)       <---------ARR14(2)    <------ZmHOX2a(1)   <---------At4g35610 <-----------RAV1(2) -------RAP2.6(2)          --------->ANAC46              --------->MYB52(1) ------>ANAC46 <---------ANAC46                  --------->At4g35610 ------At5g28300       <---------AHL20(2)      <------ZmHOX2a(1) ----->RAP2.6(3)--------->LBD16       <---------------AGL15              --------->ANAC58 ------LBD16   <---------ANAC58       --------------->AGL15     --------->ARR11(3)     --------->CCA1(2) -------GT1    <---------ANAC58       <----------DOF2    ---------->DOF2 --------->ANAC58   <------ZmHOX2a(1)   acggcaggagatatgagccgtggatttattcgctactctgcttttatgaggagcacaaataaaggagataatgggaagcaagtagagagatagaggagag  7913100                    --------->DAG2                   ---------->DOF2                         --------->ANAC58   >>>>>>>>>TBF1             ----------->GT1                               --------->ANAC58>>>>>>>>>TBF1       ---------->DOF2    <--------P                   <------ZmHOX2a(1)>>>>>>>>>TBF1   agagtttgataaagagagagaaaaaggggttgcgatttgggagaagagaaatagagaggagaagcattagagaagaagaagaagaagatggatagaaata  7913200                               <---------ARR14(2)                               --------->ARR14(2)                              <------NtERF2                             --------->LBD16                            --------->ATERF1(2)                            <---------ATERF1(2)                            --------->HSFB2a(2)                            --------->LBD16                            <---------ANAC46                            <---------HSFB2a(2)                            --------->RAP2.6(2)                           ----------------->AGL1                           <---------LBD16                           <-----------------AGL1                          ------>NtERF2                          --------->MYB52(1)                        --------->ATERF1(1)                       --------->ATERF1(1)                       --------->At4g35610                       <---------ZAT2                       <---------At4g35610                       <------NtERF2                       --------->ZAT2                       <-------GAMYB                       <---------ATERF1(1)                      <---------RAP2.3(1)                      <---------ATERF1(1)                      ------>NtERF2                      <---------ERF1                      <---------MYB46(3)                      <---------RRTF1(1)                     <---------ANAC46                     <---------DREB2C(2)         <------NtERF2                     --------->ATERF1(2)        --------->LBD16                     <---------RAP2.3(2)        <---------ATERF1(1)                     <---------RAP2.3(3)       <---------ANAC46                     <---------ANAC58          <---------DEAR3(1)                     <---------ATERF1(2)      <------NtERF2       --------->HSFC1(2)                     <---------ANAC58        --------->LBD16      <---------HSFC1(2)                     <---------RRTF1(3)      ------>NtERF2     <---------MYB52(1)                     <---------RRTF1(2)     <---------LBD16    <------NtERF2                     <---------RAP2.6(2)    --------->ANAC46  --------->LBD16    <-----------RAV1(2)                     <---------DEAR3(1)    <---------LBD16  <---------LBD16   <-----------GT1 --------->GLK1(2)  --------->RAP2.6(3)<----------DOF2  ---------->DOF2      <-------TEIL       -----   gagaagctagaagagtacctatggcggctgccggaaatggtctttcccggcggagacatagagccggaagtttcagagattcaccaggtttgtttttgaa  7913300                                                                                          --------->ALFIN1                                                                                        <---------ANAC46                                                                                        --------->LBD16                                                                                       <---------DEAR3(1)                                                                                       <---------MYB46(3)                                                                                      <---------LBD16                                                                                      <-------TEIL                                                                                    --------->ARR14(2)                           ------>ZmHOX2a(2)                                        <---------ARR14(2)                          --------->CCA1(2)                                        <---------HSFB2a(1)                          <------ZmHOX2a(2)                                        <------MYB46(1)                         <---------AGP1                                            --------->HSFB2a(1)                         --------->AGP1                                            <---------HSFC1(2)                         <---------ARR14(2)                                        <------MYB83                         --------->ARR14(2)           <-----------GT1              --------->HSFC1(2)                         --------->ARR11(3)     <---------YAB1                    --------->MYB59 <--        <------MYB83     <---------ARR11(3)<------MYB83                           ----------->ARR10 -   --------->ATHB12  <---------At4g35610<---------MYB52(1)                      <------ZmHOX2a(1)<--- -->TEIL<------MYB46(1) <---------CCA1(2)  <------MYB46(1)  ------->TEIL     <------ZmHOX2a(1)   ----   tctcttgatttggtttgtttttcatcagatctgagagaaaacgtttggttctgatttttctgaacgtttttttcacagaggaggaaggtccggtggagtt  7913400  Previous    Next  AGI:  At3g22380.1    Description:  TIC (TIME FOR COFFEE). similar to ATTKL/TKL (TICKLE) [Arabidopsis thaliana] (TAIR:AT3G63180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71144.1) Range:  from: 7912912    to: 7919491    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version