Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                                                                             <-------                                                    <---------ZAT6                          <-------TEIL                                                   <---------YAB1---------->DOF2          --------->ARR14(2)                                           <---------ALFIN1   --------->TOE2(3)           <---------ARR14(2) ------>ARR11(3)                        <---------ETT(1)    <-------TEIL            <---------ZAT14 -------ARR11(3)                        --------->ANAC46--------->MYB59             --------->ZAT14 ----->YAB1             <---------ATHB12----------->HVH21  --------->CCA1(2) --------->ANAC46--------   gatattcaaaccgagaaggttgtccaatggtttcaacagtttgcgacacagttattgttagatacatcaaagaaactataagacactacacaaatacgtc  7903800                                   <---------AHL20(2)                                   ------>MYB46(1)                              --------->AHL20(2)                                        ------>MYB83                              <---------AHL20(2)                                       --------->ANAC58                          <----------DOF2        --------->WOX13(1)                    --------->ANAC46                      <-----------GT1--------->YAB1                                   --------->MYB46(3)                  <---------AHL20(2)<---------YAB1                               <---------ARR11(3)                <---------RVE1(1)  --------->AHL20(2)                            --------->ARR11(3)               <---------ARR14(2)  <---------AHL20(1)                    ----------->TGA1               --------->ARR11(3)  --------->AHL20(1)                    ----------->HVH21    <---------HSFB2a(2)   <---------DAG2        <---------AHL20(2)     --------->At4g35610    --------->HSFB2a(2)<-----------GT1<---------AHL20(2)         <---------AHL20(2)  --------->At4g35610 ->ANAC55(2)   --------->ARR14(2) --------->YAB1--------->AHL20(2)     <---------At4g35610 --ANAC55(2)   <---------ARR11(3) <---------AHL20(2)            --------->AHL20(2) <-----------GT1 -- ->ANAC46     <------ZmHOX2a(1)   --------->AHL20(2)--------->YAB1  --------->RAP2.6(3)--------->ANAC58   tctgttttggaacagaggatttttttaactttttaattatattaatctaattaatcaaaacatgaattaaaacggctgacgaatatcaccagccaagtct  7903900                                                                                       --------->At4g35610                    --------->ANAC58                                                 <---------ZAT18             <-----------GT1                                                ---------->ID1 --------->REM1(1)            <---------YAB1                                       --------->LBD16     --------->ZAT18          <---------ICU4                                        <---------ANAC58  <---------ANAC58         <---------YAB1<----------DOF2  --------->ZAT18         <---------ANAC46  <---------ANAC46        <---------GLK1(2)               <---------ETT(2)        <---------ANAC58  <---------ANAC58 --------->GT1      --------->ANAC58    --------->ETT(2)       <---------LBD16<----------DOF2    <---   atagaaaaaagattattactacaagcttttacttaaaaaatgtccacagtttttgagcataaacttgcggattagtttgtcttttcgtgtgctacaagtc  7904000                                                                ----------->TBP                                                             <-----------------AGL2                                                             ----------------->AGL3                                                             ----------------->AGL2                                                          <---------WOX13(1)                                                         <------------CBF                                                       <---------MYB52(1)                                                      --------->LBD16                                                     <---------ANAC58                                                     <---------ANAC58                                                     <---------ANAC46                                                     --------->ANAC55(2)                                     <------------CBF<---------ANAC55(1)                            <---------ANAC58         <---------ANAC55(2)                      -------                            <---------ANAC58    <---------ZAT6--------------->AGL15         ------>MYB46(1)                         <----------DOF2   ------>ZmHOX2a(2) <-----------------AGL3    <-----------GT1                    <-----------GT1 >>>>>>>>>EIN3<---------GLK1(1)       <-----------HVH21  ------>MYB83 -------DOF2    ------->TEIL<---------ANAC46 ------>ZmHOX2a(1)<---------------AGL15<------ZmHOX2a(1)   ttttagtcaaattagacgaattttacgctttcttgtatacattgatcctagagttccgtaattgctataaatagatgtcagtttaggagttaccaaatgc  7904100                                                                  <---------YAB1                                                               --------->ICU4                                                               <---------YAB1                                                             -------->HAHB4                                 >>>>>>>>>>>>>>>>>LFY        --------->YAB1                         --------->YAB1                      <---------ICU4                       <---------YAB1                       <---------YAB1                      --------->TOE2(3)                     --------->ICU4                     --------->YAB1                       <---------ICU4                     <--------HAHB4                       --------->YAB1                    <---------YAB1                  ------>ZmHOX2a(2)                  --------->ANAC58 <----------ID1--------->ZAT6   --------->ARR14(2)<---------ARR14(2)     <------NtERF2 --------->ANAC58 ----------------->ANAC81--------->WOX13(1)       --------->ARR14(2)   <---------DEAR3(1)  --------->MYB52(1)   aaaaaaacaaaaaaaaaacactatcattaatcaagttccactgttcattttcgatctgcataatgatgatgagtcgtcgctatggagccaagctaatgga  7904200                                                     <---------AHL20(1)                                                     --------->AHL20(1)                                                     --------->ICU4                                               <---------ANAC46                                             --------->MYB52(1)                                            ----------->TGA1                  <---------ANAC46                                            ----------->HVH21                 <---------TGA1a                                          <---------TGA1a           <---------DEAR3(1)                                          <---------O2            ------>NtERF2                                          --------->TGA1a        <---------ANAC46                                          --------->O2        --------->ARR14(2)                                       ------>ZmHOX2a(1)   <---------TOE2(3)  <---------ANAC58                                   <---------ARR14(2)--------->ARR11(3)       <---------O2     ----------->HVH21         <---------TOE1(2)----------->GT1 <---------LBD16 <---------ZAT14              ------>ZmHOX2a(1)<---------ANAC55(2)--------->LBD16 --------->At4g35610<----------DOF2--------->ARR14(2)<---------ARR11(3)       <---------ANAC58 --------->ZAT14    ================================bZIP_DOF  <---------ARR14(2)   aactgctgtgactcacagccatcttttgaatcctagggttcctctcgtgacggaaaatattagggttccggcgatgggagtcgtgagagttttcagcaag  7904300                                                 --------->ANAC58                                              <------NtERF2                                             ------>NtERF2                                          <---------MYB46(3)                                     ------>ZmHOX2a(2)                                   <-----------ARR10                                   <---------ARR14(2)                                   <---------ARR11(3)                                   --------->ARR11(3)                                   <---------At4g35610                                   --------->GLK1(2)                                    --------->At4g35610                                   <---------AGP1--------->ANAC58                      --------->MYB52(2)                                   --------->ARR14(2)                                <---------MYB52(1)                                  <------ZmHOX2a(1)                                  --------->DOF5.7(2)                           ================HOX2a_HOX2a                         --------->AHL20(2)                           <------ZmHOX2a(1)--------->ALFIN1                   <---------AHL20(2)   -                     <---------LBD16<------ZmHOX2a(2)             ---------->DOF2   --------->TOE2(3)                    --------->MYB52(1) --------->MYB52(1)   ----------->GT1   <---------ATHB12    <--            >>>>>>>>>TBF1  =================HOX2a_HOX2a    <---------TOE2(3)--------->WOX13(1)<------   atgacatttgagaagaagaaaactacggaggagaaaggatctagcggtggcaaggctgatcaaggtaacaaaggggagcaattaatcgttagctactggg  7904400                                                                                            <--------                                                                                 <---------YAB1<-----                                                             <-------TEIL       <---------AHL20(1)               <------ZmHOX2a(2)                         --------------->AtSPL8 <---------AHL20(2)       --------->At4g35610                               <---------------AtSPL8 --------->AHL20(1) -------->ALFIN1    ---------->DOF2                  <----------DOF2            --------->AHL20(2) -------ANAC46--------->ARR11(3)                    <---------ANAC58           --------->YAB1 <------ ---LBD16     <---------ARR11(3)                    <---------ANAC58   <----------DOF2  <---------GLK1(1)   gagtgaagccgatgaagatcaccaaagaagatggaactgaatggaaatggagttgctttagggtacattacatctttggtattatattagaactctgtgg  7904500                                                                  ------>ZmHOX2a(2)                                                                 --------->CCA1(2)                                                                 <------ZmHOX2a(2)                                                                <---------AGP1                                                                --------->ARR14(2)                                                                --------->AGP1                                                                <---------ARR11(3)                                                                <-----------ARR10                                                                <---------ARR14(2)   <---------AHL20(2)                                           --------->ARR11(3)   --------->AHL20(2)     <---------ANAC58                     <---------CCA1(2) ---RAV1(1) --------->ATHB12      --------->MYB52(1)      --------->WOX13(1) ----MYB46(3)             <---------ANAC46              <---------AHL20(2) ---AtMYB61<---------YAB1 <---------ANAC58              --------->AHL20(2)             --------->YAB1   tcgatttatatgtatgatttgagtttttgtgtggaataactgtagccatgggagacatataaatcagatctgactatagatttgaagaagcatcatgttc  7904600                                                                      --------->At4g35610                                                                      <---------At4g35610                                                            <----------DOF2                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                         <---------ARR14(2)                                                         <---------ARR11(3)                                                         --------->ARR14(2)                                                         --------->ARR11(3)                                                     -------->P       --------->ZAT2                                                     --------->MYB52(1) ----------->HVH21          --------->LBD16                            ------>MYB83     --------->O2        <---------LBD16                              ------>MYB46(1) --------->LBD16 <----------DOF2      <-----------GT1           --------->At5g28300<---------SPL7   --------->HSFB2a(2)    <---------DAG2             <---------ANAC46   <---------ANAC58  <---------HSFB2a(2)    <----------DOF2            ----------->GT1    <---------ANAC58  <-----------RAV1(2)    <---------TOE2(3)   catcgactttaccggacaaactagcttattggaccgtgaaatctcttcgatggcctaccgatcttttcttccaggtgacagtcttagctttctatggttt  7904700  Previous    Next  AGI:  At3g22360.1    Description:  AOX1B (alternative oxidase 1B); alternative oxidase. Identical to Alternative oxidase 1b, mitochondrial precursor (AOX1B) [Arabidopsis Thaliana] (GB:O23913;GB:Q4PSN3); similar to AOX1C (alternative oxidase 1C), alternative oxidase [Arabidopsis thaliana] (TAIR:AT3G27620.1); similar to alternative oxidase [Populus tremula x Populus tremuloides] (GB:CAB64356.1); similar to mitochondrial alternative oxidase [Nicotiana attenuata] (GB:AAR37364.1); contains InterPro domain Alternative oxidase; (InterPro:IPR002680) Range:  from: 7904163    to: 7905391    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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