Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->ANAC58               --------->ANAC58                                     --------->ARR11(3)               --------->ANAC46                                    --------->YAB1            --------->ZAT14                                    <---------ARR14(2)            <---------ZAT14                                    --------->ARR14(2)            --------->ZAT18                                 --------->RAP2.6(2)           ------->GAMYB        <---------AHL20(2)          <---------ANAC46      XXXXXXXXXXXXXXXXXXX -----------ARR10<---------ARR11(3)                --------->ARR11(3)           --------->YAB1 ---------ARR11(1)             --------->AHL20(2)  --------->GLK1(2)<---------ARR11(3) -------->ARR11(3)          <----------DOF2        <---------ARR11(3)          <---------YAB1 --------CCA1(2) --------->ARR11(3)   <-----------GT1  ---------->DOF2      <---------MYB52(1)  <----   caaatctttccaactgcacgatattgttttcttttaaattttgccgaactaaaaatctaaagccgtatatgatatttcgttatgaaaacgactccatcaa  7898800                                           ---------->DOF2                                        <---------ANAC55(2)                                        --------->ANAC58                                        --------->ANAC58                                        --------->ANAC55(2)                                      --------->MYB52(1)                                   <---------ANAC55(2)                                   <---------ANAC58                                   --------->ANAC58                                   --------->ANAC46                                   --------->MYB46(2)                                   <---------ANAC55(1)                                --------->MYB59                                   <---------ANAC58                               <---------ANAC58                                   --------->ANAC55(2)                            <---------ANAC46                                   --------->ANAC58                               <---------ANAC58                  --------->ATHB12 --------->ANAC55(1)                    --------->TOE2(3)<------NtERF2        ------->TEIL         --------->AHL20(2)                          --------->HSFB2a(1) X>MIR161.1      <---------YAB1  <-----------GT1       <---------ICU4    <---------HSFB2a(1)  <------ -----TOE2(3)    <-------TEIL<---------AHL20(2)     --------->TOE2(3)   ------->TEIL<---------MYB52(1)   ggatgtaatgtatcaaatgttcattggcagttttattacgtaacgtaatgcaatccataattctgttttcgtcgaacctttgtttcgttaggcagagaga  7898900                                                                                                    <                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                      --------->AHL20(2)                         ----                                              <-----------GT1                        <---------ARR11(3)                                             <-----------GT1         --------->AHL20(2)       ------>MYB46(1)                                        <---------AHL20(2)           <---------AHL20(2)     <--------                                        --------->AHL20(2)          --------->AHL20(2)   <-----------GT1                     ----------->GT1   <---------AHL20(2)       <---------YAB1       --------->ARR11(3)                     <----------ID1    --------->AHL20(1)  <---------AHL20(2)        <-----------ARR10                   --------->MYB52(1)  <---------AHL20(1) <---------AHL20(2)        <---------CCA1(2) ----ID1   ----------->GT1             --------->AHL20(2) --------->AHL20(2)  ---------->DOF2 ------>MYB83   caaaatacagaagtagaaaaaaaacgaaaaaatgagtagaatttattttacccagatttattaattttgatttaatttggcaaagtatatcttaccaaat  7899000                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                          <---------ICU4                                                                                          --------->YAB1                                                                                          <--------ATHB1      <------------CBF                                                                    -------->HAHB4    <---------YAB1                                                     <----------DOF2    --------->ATHB51 ------------CBF                   ---------->DOF2                     <---------DAG2     <--------HAHB4 ------>AHL20(1)                 <---------HSFB2a(2)                <-----------GT1      <---------YAB1 ------>AHL20(2)            <<<<<<<<<TBF1                      --------->AHL20(2)        --------->ICU4 -------AHL20(2)   <---------AHL20(2)         <-----------GT1  <---------AHL20(1)        --------->AHL20(2) ------AHL20(2)    --------->AHL20(2)     --------->YAB1       --------->AHL20(1)        <---------ATHB51 ----->AHL20(2) <----------DOF2  --------->HSFB2a(2)          <---------CCA1(2)     --------->YAB1  < -MYB59  <-----------GT1<-----------GT1--------->YAB1<----------DOF2<---------AHL20(2) --------->YAB1   taaattgttattgactctcttttaattttcttcttcccaaagaataataaactctctttttctcatatattaactttttaactcagacataataattatt  7899100     <-----------TBP     --------->AHL20(2)     <---------AHL20(2)   <---------YAB1 --------->AHL20(2) <---------AHL20(2)         --------->AHL20(2) ----->AHL20(2)             <-----------TBP            <------------CBF ------AHL20(2)           <----------DOF2            --------->AHL20(1) -----AHL20(2)          <---------YAB1               --------->AHL20(2) ->ATHB51        <------ZmHOX2a(1)                   <---------AHL20(2) --ICU4  <---------------AGL15----------->TBP       --------->AHL20(2) ->AHL20(2)     ----------->GT1               --------->TOE2(3)                                    <- --AHL20(2)    <---------TOE2(3)             <---------ANAC55(2)                              ------- -YAB1   <---------YAB1<-----------GT1       ----------->GT1                      <-----------GT1  -- >ICU4<---------YAB1   --------->ARR11(3)   <---------TOE2(3)           <---------ARR11(3)    ------- ---------AHL20(2)     <---------ARR11(3)  --------->MYB52(1)      ------------>CBF   --------->YAB1-   tatttatttttataaatgaggaaattatctttatatataggctaataacgtaaaaaaaattgatgaagaaacaatatcccaaatttactcataaacaagc  7899200                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                    >>>>>>>>>TBF1                               <---------MYB46(3)                               --------->DEAR3(1)                              <---------ARR14(2)                              --------->RAP2.3(1)                              <-----------ARR10                              <------NtERF2                                    --------->ARR14(2)                              --------->ATERF1(1)                             <---------MYB52(1)                             ------>NtERF2                                   <---------DEAR3(2)                             <---------ATERF1(1)                            <---------TOE1(2)                             <---------RAP2.3(1)                            <---------DEAR3(1)                            <---------DEAR3(1)                             <------NtERF2                            --------->DEAR3(1)                             --------->ATERF1(1)      --------->MYB52(1)   --------->RAP2.3(1)                             <---------LBD16   --------->TOE1(3)       <---------ABI4(2)                             <---------DEAR3(1)   --------->TOE2(3)       --------->ATERF1(1)                           --------->ETT(2) --------ARR14(2)         <---------ATERF1(1)                           --------->ATERF1(1)  <------- -->ANAC58                <---------RAP2.3(1)                          <-----------HVH21 ----------->HVH21 ------->ARR14(2)         ------->GAMYB                               <---------MYB46(3) --------->WRKY12 -->ANAC58               <---------DEAR3(1)          <---------ETT(1)<---------AtMYB61 <---------At4g35610 -------->GLK1(1)      --------->MYB52(1)   --------->ATHB12         --------->ALFIN1  ----------->RAV1(2)   agaaaccctaacgagttaactatggcaacggcgccgaagaagaagttgattagttccgacaacgatacagagtggtcgccggttcttgcccctgacctga  7899300                            --------->LBD16                    <------MYB83              <---------HSFB2a(1)                              <------MYB46(1)              --------->HSFB2a(1)                            <---------WOX13(1)    <---------YAB1       ------>ZmHOX2a(2)   <---------ANAC46                <<<<<<<<<RAP2.2      --------->ICU4      -     <---------ARR11(3)   <---------LBD16              <----------DOF2      --------->LBD16         -     --------->ARR11(3)<----------DOF2XXXXXXXXXXXXXXXXXXXX>MIR170         --------->ZAT14         <-- --MYB59     <---------TOE1(2)    <-------TEIL      <---------ARR11(3)    <---------LBD16        ----   ttcgatcgatcttcgaacgtttgaactttgcggagtttcatcgagctatgtcaatttctttagattggtattccactgcggaattatgctacagacaaaa  7899400                                                                                     <---------ANAC55(2)                                                                                     --------->ANAC55(2)                                                                                     --------->ANAC46                                                  <---------MYB46(3)          <---------ANAC55(2)                                               <------MYB83                   --------->ANAC58                                               <------MYB46(1)                --------->ANAC55(2)                                              <---------AtMYB61               --------->ANAC58                                             <--------P                      ------>MYB83 ----->MYB83                             <---------ANAC55(1)               --------->TOE1(2) ----->MYB46(1)                          <---------ANAC58       <---------ICU4--------->ANAC46 -------MYB59      <----------DOF2       <---------ANAC58   ------>ZmHOX2a(1)------>MYB46(1)--------- ----->ANAC46--------->KAN4(2)           <---------ANAC46 ------>ZmHOX2a(2)--------->TOE2(2)<--------   cccaactccatggctcattctcttttcaaactatagacatatttcgtgtaggttgtttgatcctcttcatgacaaaacctacgtaatacgagacctaggg  7899500                                            <-------GAMYB                                           --------->MYB111(2)                                           --------->MYB55(2)                                           <---------MYB46(3)                                          <--------P                                         <-------GAMYB                                        <---------MYB46(3)                                     --------->At4g35610                                     <---------ZAT2                                     <---------At4g35610                                     --------->ZAT2                                   <--------P                                --------->HSFB2a(2)                          <---------------AGL15 <---------TOE2(3)       <-----------GT1  --------->GLK1(1) <---------ANAC58--------->MYB111(2)            <---------GLK1(2)  <---------GLK1(1) <---------ANAC58--------->MYB111(1) <------ZmHOX2a(2)               --------->ZAT14 >STY1(1)      <---------MYB46(3) <---------MYB52(1)   --------->ARR11(3)         ------->TEIL -STY1(1)  <------ZmHOX2a(1)    <---------HSFB2a(2)    <---------ARR11(3)   <----------DOF2   tttgatttccataggagttgttgtttggctacttctggtagctggttgttgatgttagatcatagaaccgatttttatcttttgaatctgtttactcgag  7899600                                                                         <---------ANAC58                                                           <------MYB83  <---------ANAC46                                                          --------->MYB111(1)                                                          <---------MYB46(3)                                                          --------->MYB55(2)                                                          --------->ALFIN1                                                          <---------AtMYB61                                                          --------->MYB46(2)                                                          <---------DEAR3(1)                                                          --------->MYB111(2)                <----------DOF2 <---------MYB46(3)       <---------MYB55(1)           <-----------------AGL1       <---------At4g35610<---------MYB46(3)   --------->ARR11(3)  --------->ARR14(2)       <---------ATHB12             <-------GAMYB    <---------ANAC58  <---------ARR14(2)  --------->ANAC58  --------->At4g35610<------MYB46(1)      <---------ARR11(3) <------ZmHOX2a(1)    --------->ANAC58<-----------RAV1(2)<--------P   --------->GLK1(1)     <--------   agaggatttgtcttccgactttggaagcaatcgatggatggcagatgaagtttgagagggttggtgagtctgatttcttgaagacattcacttatcgtga  7899700  Previous    Next  AGI:  At3g22345.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G03730.1); similar to At3g03730-like protein [Arabidopsis lyrata] (GB:ABY60296.1) Range:  from: 7899222    to: 7900521    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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