Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->MYB52(2)                             <---------MYB52(1)                            <-------GAMYB                           --------->MYB55(2) ----------DOF2            <---------MYB46(3) --------ANAC58            --------->MYB111(1) --------ANAC58            --------->MYB111(2) -----WOX13(1)            <--------P<---------ANAC58              --------->TCP15(1) -->ATHB12          <----------DOF2 <---------ANAC58              <---------PCF2                    - --YAB1<-----------GT1   <-------GAMYB                      <----------DOF2                ----------   tgctttgtttaacaaaacacccctttgggttgttagtttcttgatggaagtttgagtttgggcttatgggtccctattgatacctccaaatgaaaaaggc  7881200                                                   <---------MYB52(1)                  <---------ANAC55(2)        --------->MYB46(3)                  --------->ANAC55(2)      --------->ARR14(2)                --------->YAB1             ------>MYB83             --------->WOX13(1)            ------>MYB46(1)         --------->At4g35610             --------->AtMYB61                     ----------->GT1       <---------RAP2.3(3)              --------->MYB46(3)          <-----------GT1       <---------RAP2.3(2)             --------->ANAC58   --------->ANAC46    <-------MYC3       <---------DEAR3(1)              --------->ANAC58  --------->ZAT18 ------>MYB46(1)            < -------->YAB1 <---------ATHB12       --------->WOX13(1) <---------ZAT18 ------>MYB83 --------->AHL20(2) >DOF2--------->RAP2.6(3)   <---------YAB1--------->WOX13(1)    --------->YAB1------->MYC3       <---   attgataagacggctcaatcacgtttcattatgtttttgtcaaccaatccaccgttttgtacacaagtataaacctcccatgtgtaaattatacatatca  7881300                                                               --------->ARR11(3)                                                               <---------ARR11(3)                                                               <---------GLK1(2)                                                             <---------TOE2(3)                                                             <---------TOE1(3)        --------->ANAC58              ----------->GT1     <---------ARR11(3)   <---------ANAC46               --------->ANAC46 ---------WOX13(1)>>>>>>>>>MYB98  --------->ARR11(3)<---------AtMYB61                 --------->ANAC58 ------YAB1  <------ZmHOX2a(1)  <---------TOE2(3)----------->HVH21             --------->AtMYB61   agattgatattagcaggagtaacatattagtactaaggtctatgtgatgcagtgatggtgtttaagattttcttcaagggaccaaaacacacaagttgat  7881400                                                                 <----------DOF2              -------               --------->ANAC58                                  <---------------AGL15        <------               --------->ANAC58                                  --------------->AGL15      <--------           --------->ANAC58        <----------DOF2            <-----------GT1        ---------->DOF2           --------->ANAC58        --------->TOE2(3)         <<<<<<<<<<GT-3b      --------->TOE2(3)          --------->MYB59--------->YAB1          <---------GLK1(1)              <-------TEIL<--------     ---------->DOF2     <-----------GT1         --------->GLK1(1)       ------------>CBF   ---------   acacttgcaaagtaggcaagaatgtattcacaatctactttaatcccttggaattctttgtatttttctttgtttagcaatatacatcaaagtgccagaa  7881500                                                                                                  ---                                          --------->AHL20(2)                                      <--                                     ----------->TBP                                             <--- --------->ANAC58                    <---------AHL20(2)                                          ---- --------->ANAC58                    --------->AHL20(2)              --------->YAB1       ----------- -->At4g35610                      ----------->TBP                  *TSS                 <---------MYB46(3) ---At4g35610           <---------TOE2(1)--------->AHL20(2)       <------------CBF       <---------DEAR3(1) -HSFB2a(2)             <---------TOE1(1)<---------AHL20(2)   ----------------->AGL1    <---------ANAC46 ---RAV1(2)      <---------ATHB12<-----------TBP       <---------ARR14(2)         <---------AHL20(2) >HSFB2a(2)    ------>ZmHOX2a(1) --------->AHL20(2)    --------->ARR14(2)        --------->AHL20(2)   gacaaggaaaacacatcctatcaagtacgaggggattatataaataaataagaagagtatatgtgccaaattgataacttctaataaatggagggtgcaa  7881600                                                                                          <----------DOF2                                                                                         <-----------                                                                                     ================                                                                                     ------>ZmHOX2a(2)                                                                                    --------->GLK1(1)                                                                                    <---------GLK1(1)                                                                                    =================                                                                                   <---------ARR14(2)               --------->ANAC58                                                    --------->ARR11(3)               ----------->GT1                                                     <---------ARR14(3)  --------->AHL20(2)         <------NtERF2                                         <---------ARR11(3)  <---------AHL20(2)        ------>NtERF2                         <---------WOX13(1)<------ZmHOX2a(2) --------->AHL20(2)        --------->DEAR3(1)                    >>>>>>>>>ARR2     --------->ARR14(2) <---------------AGL15     --------->ANAC58                     --------->ATHB12  --------->GLK1(1) ------>AHL20(2)         --------->CCA1(2)                     <---------YAB1     <---------GLK1(1) -------AHL20(2)    ---------->DOF2       --------->LBD16   <----------DOF2    --------->LBD16 ------ATHB12  --------->ANAC58       <---------ALFIN1     <---------DAG2     --------->HSFB2a(2) ----->ICU4  --------->CCA1(2) <-------GAMYB               <----------DOF2    --------->LBD16 >GT1    <------ZmHOX2a(1) --------->ANAC58         ---------->DOF2          <---------LBD16   ttaataaataaggagagacggaaaaagagacgccgttgaaacaccgcaaaacagagaagcgccttttgattgtctctctcccggagatctctctttctct  7881700                        --------->ZAT18                        <---------ZAT18                        <-------PIF4                        ------->PIF4                       --------->ATERF1(1)                   ------>ZmHOX2a(2)                       <------NtERF2               <---------ANAC58                      <---------ZAT18              <---------ANAC46                      ------>NtERF2             --------->ARR14(2)                      --------->ABI4(2)<---------ALFIN1     <------ZmHOX2a(2)                      <---------ATERF1(1)       <---------ARR14(2)                     --------->DEAR3(1)--------->AtMYB61   --------->ARR11(3)                  <---------DEAR3(1)   --------->DEAR3(1)  <---------ARR11(3)         ------>ZmHOX2a(1)            --------->MYB46(3)--------->SPL7 -------------ANAC81<------NtERF2    ------>NtERF2 <---------ANAC58 ===============HOX2a_HOX2a         --------->ANAC46<---------------AtSPL8                <---------CCA1(2) ===============HOX2a_HOX2a         <---------ALFIN1<---------------AtSPL3--------->ARR14(2)        -   tcttctccatccttcttctctcggcgcgcgcttcatccccaccaccttcgaattcgtgtacgatctctaaaatccagttttgctatcgacttatctctta  7881800                                                          <---------YAB1                                                       <------ZmHOX2a(2)                                                      <---------ARR11(3)                                            --------->At4g35610                                            ----------->GT1                                           <---------MYB46(3)           <---------YAB1                  <---------DEAR3(1)       --------->GLK1(2) ------>NtERF2                    --------->GLK1(2)   --------->ARR11(3) -------->ANAC46              <-----------GT1--------->At5g28300    <---------ARR11(3)        <------   ttgcgccattgttatgcataagaaggggattttaacaatctagggccggtgaataagatcatacttgaaaaatctgattttgtagatgaaatcgttgtgg  7881900                 <---------ANAC55(2)                 --------->ANAC55(2)                 <------MYB46(1)                 <------MYB83                --------->MYB111(1)                --------->MYB52(2)                                                            -------                --------->MYB46(2)                                                        --------->AHL20(1)                --------->MYB59                                                           <---------AHL20(1)              <---------MYB52(1)                                                          <---------AHL20(2)            <------MYB83                                                                  --------->AHL20(2)            <---------MYB46(3)                                                            --------->ARR11(3)            <------MYB46(1)                                                        --------->HSFB2a(2)        --------->ATHB12                        <---------AHL20(2)     <----------DOF2    <---------ARR11(3)     <---------ANAC58                           <---------YAB1         --------------------->WRI1     <---------ANAC46                         --------->CCA1(2) --------->ZAT18    <---------HSFB2a(2)     <---------ANAC58                       <<<<<<<<<RAP2.2---------->DOF2        ----------->GT1 ---ANAC46 --------->MYB59              <----------DOF2  --------->AtLEC2         ------>ZmHOX2a(2)   gcaatttgcttgtttggttaggtattgtttttgagctagaccctttagatataatcgccatggaagcgctctgctttgtttggatcgagaaatatattgt  7882000                                                                                        <---------ANAC58                                                                            <---------HSFB2a(1)                                                                            <---------At4g35610                                                               <-----------------AG     <---------ANAC46                                                             <------MYB83   --------->At4g35610                                                        <---------YAB1      --------->HSFC1(2)                        <----------DOF2          ----------->GT1  <----------DOF2   <------ZmHOX2a(1)             ====================================================================MADS_MADS             <---------ANAC58                  <---------ANAC46<-----------------AGL1   <---------ANAC58             <-----------------AG            <---------MYB46(3)----------------->AGL1  <---------MYB46(3)             <---------ANAC46                <------MYB46(1) <------MYB46(1)<---------HSFC1(2)             <---------AtLEC2                <------MYB83  <--------P       --------->HSFB2a(1) ---->GT1    <---------ANAC58            <-----------RAV1(1)--------->MYB59 <---------ZAT2  ---------   aagaagaagagaattgcatgttttggctatattgtattatctgatgttggtttgtaatatggtaggccctttgagggaagctgctaggatgggtgtgaag  7882100  Previous    Next  AGI:  At3g22290.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G36050.1); similar to unknown [Populus trichocarpa] (GB:ABK93267.1); contains InterPro domain Protein of unknown function DUF1692 (InterPro:IPR012936) Range:  from: 7881568    to: 7885586    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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