Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->YAB1                                                                 <---------AHL20(2)                               --------->AHL20(1)            --------->AHL20(2)                               <---------AHL20(1)      --------->ANAC58                               --------->AHL20(2)      --------->ANAC46                               <---------AHL20(2)      --------->ANAC58<---------YAB1                              --------->AHL20(2)      --------->SPL7 --------->YAB1                         ----------->RAV1(1)      ------>ZmHOX2a(1) <---------YAB1           -------- ->DOF2          --------->AHL20(2)    <---------WRKY38(1) <----------DOF2                  <--------   agttgacaaaattaagagaaaaaatagcgacattatattggacaacgttttcctcatacgcctttatataatcataaatagattgtagtatatagattct  7870500                                                            <---------MYB46(2)                                                            <------------MYB.PH3(2)                                                            <---------MYB52(2)                                                <---------YAB1                                               <---------ARR11(3)                                               --------->ARR11(3)                                              --------->CCA1(1)       <---------AHL20(2)               --------->ANAC58    <---------MYB59                 <--------      --------->AHL20(2)                ----------->GT1     <---------MYB111(1)             <--------     XXXXXXXXXXXXXXXXXXXX>MIR397B       --------->ANAC58  <-----------GT1     <---------AHL20(2)  <---------AHL20(2)   <---------AHL20(2) --------->AHL20(2)<<<<<<<<<<AtMYB44 --------->AHL20(2) ->GLK1(2)     --------->ATHB12 --------->TOE2(3)--------->YAB1  <---------DAG2<-----------GT1 -GLK1(2)     <---------YAB1 <-----------GT1  --------->RVE1(1)  <----------DOF2          --------->YAB1   ctagtttatttaatgcatcattgatttttttttacatcaaacaagaaaatatcatattagtaactaactttattagataattaactatagttttataatt  7870600                            <---------YAB1                    <---------AHL20(2)                           <---------AHL20(2)        ------>ZmHOX2a(1)                         <---------YAB1             --------->TOE2(3)                        <---------AHL20(1)     <---------At4g35610                        <---------AHL20(2) <-----------GT1  <---------YAB1           <---------AHL20(1)       <---------AHL20(2)   <---------YAB1                      <-------   <----------DOF2--------->ANAC55(2)   <---------AHL20(2) <---------AHL20(2)     <----------DOF2  <- -AHL20(2) --------->AHL20(2)      <---------AHL20(2)<----------DOF2              <---------DAG2   <- -YAB1     <---------AHL20(2)<---------AHL20(2)--------->At4g35610         <-----------GT1  <--------   gttttctttctattttatttatgtattatttttattttttatttttttcagcatcctttattattttaaaatttttgttactcactttatgcattatttt  7870700                                                  --------->AHL20(2)                                                  --------->YAB1                                          ---------->DOF2                                         <---------AHL20(2)                                         --------->AHL20(2)                                        <---------YAB1                                      <--------ATHB1                                      <--------HAHB4                                      --------->YAB1                                      -------->HAHB4                                      --------->ATHB51                                     <---------ATHB12                                     <---------YAB1                                     --------->ICU4                                     --------->AHL20(2)                                     <---------ATHB51<---------AHL20(1)                        ------     <---------MYB52(1)            --------->YAB1<---------ATHB12                          --------->AHL20(1) --YAB1  <----------DOF2 --------->AHL20(2)      <---------ATHB51              <------ZmHOX2a(1)    - --------TOE1(3)         <---------AHL20(2) --------->ANAC58               ---------->DOF2 --------->AHL20(2) --------TOE2(3)         --------->AHL20(1) --------->ANAC58            --------->AHL20(2) <---------AHL20(2) -AHL20(1)          --------->AHL20(2)<---------ICU4 --------->AHL20(1)--------->AHL20(2) --------->AHL20(2)   taaggtcgtttcttttgcagaaaaaaataaaatacactaataattaaagcaataatatttttctgacaaacaaataaaaaaggattactgaaattaatta  7870800                           --------->ANAC46                           <---------ANAC55(2)       --------->LBD16                           --------->ANAC58         --------->ANAC46                           --------->ANAC55(1)      --------->ANAC58                      <----------ID1               <---------LBD16                 <---------AHL20(2)            ----------->HVH21                 --------->YAB1                --------->WRKY38(1)              <---------ICU4          <---------ANAC46  ---------->DOF2             <---------ATHB51 --------->MYB52(1)<---------WRKY18(1)             --------->ICU4--------->ANAC55(2) --------->WRKY45                                    *TSS             <---------AHL20(2)    ----------->HVH21--------->ANAC58                          -------             --------->AHL20(2)  ------->GAMYB --------->WRKY12                            --------->GLK1(2)     ----------->GT1  --------->ANAC46<---------bZIP60(2)      >>>>>>>>>TBF1               <---------ARR14(2)     --------->LBD16  --------->ANAC58<---------ANAC58>>>>>>>>>E2Fc                       --------->GLK1(1)   <---------LBD16    --------->ANAC58<---------ANAC58>>>>>>>>>E2Fd----------->GT1      <------ZmHOX2a(1)   >>>>>>>>>>AtSR1<---------AHL20(2) ----------->STF1------>NtERF2>>>>>>>>>TBF1       <---------TOE2(3) --->YAB1  --------->YAB1  --------->ANAC58  <----------DOF2------------------------>ANAC81---------- --------->DOF2  --------->AHL20(2)----------->TGA1--------->MYB46(3)     ---------->DOF2 <---------GLK1(1)   gaaaacgcggaaaaaataattaaaacgacacgcaacggtgacgttttctttgacccgccaaagaagaagaagaaaaaaaagaagtcttgaggaaatctga  7870900                                    <-----------GT1                               ---------->DOF2                     --------->WOX13(1)                           --------->MYB52(1)         --------->ZAT14                        ========                        --------->ANAC46              --------->At4g35610               <---------HSFB2a(1)          <---------ARR11(3) --------->ANAC58         <---------ZAT14           =====================          --------->ARR11(3) --------->ANAC58         <---------At4g35610       ---------->DOF2  >>>>>>>>>TBF1         --------->ANAC58     <---------AHL20(2)  <---------ATHB12       --------->HSFB2a(1) ---->HVH21         --------->DEAR3(2)      <---------YAB1 ----------->GT1--------->At4g35610<------- -------------->ANAC81  --------->ANAC58   --------->AHL20(2)  --------->WOX13(1)--------->DAG2  <---   cgaagaagaaaacatctctgagaccgacgaaacgaaagtatccatttttatttgtctgcagtagtaaatcaatcgcatcggaaaaaggaaaccttcttta  7871000              <---------ANAC58              <---------ANAC58              ==========================================bZIP_DOF              <---------bZIP60(2)              --------->bZIP60(1)              <---------bZIP60(1)              <---------TGA2(1)              <---------TGA1a              --------->O2              <---------O2              --------->TGA1a              --------->TGA2(1)              ==========================================bZIP_DOF             ----------->STF1            <---------TGA2(2)           ----------->HVH21           ----------->TGA1         --------->At4g35610         --------->ZAT2         <---------At4g35610      --------->LBD16     <---------ANAC58     <---------ANAC46     --------->ANAC55(2)                         <----------DOF2                    <---------At4g35610     <---------ANAC58                        <----------DOF2                        --------->At4g35610 =======================bZIP_DOF     <---------ANAC58                           <----------DOF2 =======================bZIP_DOF     <---------ANAC58                          <---------ANAC58 ---DOF2 <---------ZAT2             <---------TOE1(2)                          <---------ANAC58 ------At4g35610                  <---------MYB52(1)                     <---------ALFIN1 ------>ZmHOX2a(2)   gcttcttccgtagctgacgtctctctctatctgtctcttaggtgcctctttcttttcttcaacgatttctctccccctcttgctttagctgatcgatttc  7871100                             <---------GLK1(2)                             --------->ARR11(3)                             --------->ARR14(2)                    --------->AtLEC2                    --------->ANAC46                    --------->ANAC58                    --------->ANAC58                   --------->WOX13(1)                 --------->WRKY18(1)          --------->TOE2(3)                                     <               --------->ANAC58            <---------ICU4                                           -               --------->ANAC58           --------->ICU4                                            <             --------------->AGL15   <------MYB83                                              <-----            ----------------->AGL1   ----------->GT1                                           <-----            =========================================================================================            ----------------->AG <-----------RAV1(1)                      --------->ARR11(3)   ------        <---------ANAC58     <---------ARR14(2)              --------->At4g35610 ------->TEIL  <-----        <---------ANAC58-------->P   <------MYB46(1)<---------DAG2       <------ZmHOX2a(1)     <-----       <---------At4g35610   <---------ARR11(3)     <----------DOF2 <----------DOF2          <-------   gaaaaattgagcttgccaagtcaagcaaccagattttgttggtaattatctcaactttttgtttgctcaactttaggattttgaatctcagagaattacg  7871200         <------MYB83         <------MYB46(1)       <---------ANAC46 <---------------AGL15 --------->HSFB2a(2) <---------HSFB2a(2) --------------->AGL15 -----------------AGL2 ---------------->AGL3                                                                <---------GLK1(1) -----------------AGL1                                                           ------>ZmHOX2a(2) ----ANAC58                                                                    <---------AGP1 ----ANAC55(2)                                                                 --------->ARR11(3) =================MADS_MADS                                                <----------DOF2 --->ANAC55(2)                                                            ------>ZmHOX2a(2) ----ANAC58 <---------DOF5.7(2)                                          <---------YAB1 ----ANAC55(1)          --------->GLK1(2)                               <---------ARR11(3) ----GT1<---------MYB46(3)   <---------TOE2(3)<----------DOF2           --------->ARR11(3)        <--   tttccagtagtgggtaacgtttcaagaatttgagattgttttgggtttcttttgaatttgggtttattcagtgtgatctttgatctgggtttctgtagtt  7871300                                                                              <----------DOF2                                                                             <---------ANAC58                                                                          <--------P                                                                         <---------ANAC58                                                                         <-------GAMYB                                                                        <---------MYB46(3)                                                                        <------MYB46(1)                                                              <----------DOF2<---------ANAC46                                                             <---------DAG2  <---------ANAC58             ---------->DOF2                              <-----------GT1<---------ANAC58     <---------WOX13(1)                              <-------TEIL       <------MYB83   --------->ATHB12                              <---------TOE1(3)     <---------AtMYB61  <---------YAB1               <-----------GT1   <---------TOE2(3)  <---------ARR14(2) -------ANAC46           <----------DOF2         --------->MYB59    --------->ARR14(2)      <--------   ttgtgtgattgaatcgaaagttgtcttcttttgttacagattacaacattttaggttgatataccttttggatttggttgcttaatggtattggattgat  7871400  Previous    Next  AGI:  At3g22260.1    Description:  OTU-like cysteine protease family protein. similar to OTU-like cysteine protease family protein [Arabidopsis thaliana] (TAIR:AT3G02070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45062.1); contains InterPro domain Ovarian tumour, otubain (InterPro:IPR003323) Range:  from: 7870899    to: 7873551    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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