Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               ------>ZmHOX2a(1)                            --------->TOE2(3)                 <---------ARR11(3)                 --------->ARR11(3) <<<<<<<<<GATA-4                 <---------AHL20(1) <<<<<<<<<GATA-3                 --------->AHL20(1) <<<<<<<<<GATA-2                                                <-                --------->AHL20(2)  <<<<<<<<<GATA-1                                          <-------             <---------ICU4 <---------ANAC58                                                 --------             <---------AHL20(2)   --------->WOX13(1)                                   --------->ANAC58            <---------ATHB12<---------ANAC58                                           --------->ANAC58    ------>ZmHOX2a(1)  --------->At4g35610                 <---------ATHB12   --------->TOE1(3)    -- --->DOF2   --------->AHL20(2)  <---------YAB1<----------DOF2      --------->YAB1    ---------->DOF2-   gccctcctagcctaataaatatatcatcttccttatcaatccactcttctttttaaaaccaatgaactagcatcactaaaccataagtaaagcaacttaa  7833100                                                       <---------GLK1(2)                                                  ------>NtERF2                                 <---------MYB52(1)    --------->ARR14(2)                          ---------->DOF2<---------ANAC55(2)                                  <------                       --------->LBD16   --------->ANAC55(2)                            ----------->RAV1(1) --------TOE2(3)      --------->LBD16  <---------GLK1(1)                             ------->GAMYB <- --------AGL15       <---------LBD16   --------->CCA1(2)                       --------->ANAC58 >>>>> ------->AGL15   <---------GLK1(1)    --------->ARR14(2)          <----------DOF2   <---------ALFIN1 ------->DAG2<---------HSFB2a(2)<---------RAP2.6(3)    <---------ARR14(2)      --------->ANAC46 >>>>> ---------->GT1  --------->GLK1(1)    <---------ARR14(2)  <-----------GT1      --------->ANAC58------   taaggcaaattgataccagaaatccccgataagccgtttggatacgcgttgcagcccgattttccctactttgttcgtcataagcaacacccccatatga  7833200    <---------ZAT14 ---YAB1                                <---------ANAC46 --------ZAT14                   --------->YAB1                                                 ----- >>>>ARR2                      -------->P    <---------ARR14(2)                            --------->At4g35610 >>>>ARR1                     <-----------GT1--------->ARR14(2)                           --------->MYB52(1) --->ATHB12                   --------->WOX13(1)  <---------GLK1(2)           ---------->DOF2------->GAMYB   ttgtagtgaagttgaagtagagaccccagtatcaaccatactacgcgtattggaatcttcaaatccatcttgaaacttttcaaagtcaaaatcaactgaa  7833300                                                                              <---------ICU4                                                                              <--------HAHB4                                                                    ------>MYB83 <---------ICU4                                                                    ------>MYB46(1)              ------>MYB83      <---------ALFIN1                   <<<<<<<<<<<<<<<<<LFY              ------>MYB46(1)--------->TOE1(3)                     ----------->RAV1(1)   ---------->DOF2            <---------MYB59  --------->TOE2(3)                   --------->MYB46(3)<----------ID1<--- ---->GLK1(1) -------->P   -------->P --------->REM1(1)         ------->TEIL --------->ICU4  --------   ttctttctcccaaacctactcttggtagcaaccttcaccttcatcagttaaacaaacacagaaatgaaccaacattggcataattaagacaaaaagaaag  7833400                                                                                   --------->AtMYB61                                                                                  --------->MYB46(3)                                                                                  <---------MYB55(2)                                                                                  <---------ATHB12                                                                                 --------->ANAC58                                                                                 ------>MYB46(1)                                                                                 -------->P                      --------------->AtSPL8        <---------ARR11(3)           --------->ANAC58          --------->YAB1                            --------->ARR11(3)           ------>MYB83       --------->YAB1 --------------->AtSPL3<---------ANAC58                   --------->AtMYB61    ----------->GT1   <---------------AtSPL8<---------ANAC58           ----------->GT1       <------- ------GLK1(2)    <----------DOF2           <---------ANAC46    --------------->AGL15    <----------DOF2 -->DOF2 --------->ICU4                  <----------DOF2        --------->YAB1--------->MYB46(3)   aaactcttgtaataatcttcctttgaagtactcacattttcatctttcttggaagacctagacttatcagatttagtaaaaccaaccaatgctttaatcc  7833500                                           --------->TOE2(3)                                     --------->ANAC58                                     --------->ANAC58                                   <------ZmHOX2a(2)        --------->At4g35610      ------->GAMYB        --------->ANAC46     ---------->DOF2  ------------>CBF  ----------->RAV1(1)        <------------CBF  ----------->RAV1(2)--------->TOE2(3)--------->At4g35610   --------->TOE1(2)           <---------AHL20(2) ----GT1<---------At4g35610     --------->MYB46(3)----------->RAV1(1)  ------------>CBF <---------ATHB51   atctccctgaagctcccattctatctcaattccaacgatcagcaacataaaacaacacaaaacctgcaaaattgccaatttagcaactaaattattcaaa  7833600                                                                                       ------>ZmHOX2a(1)                                                                                      --------->TOE1(3)                                                                                      --------->TOE2(3)                                                                                     ------>ZmHOX2a(2)                                                                       ====================HOX2a_HOX2a                                                                       ------>ZmHOX2a(1)                                                                       =====================HOX2a_HOX2a                                                         --------->ZAT14           --------->ARR14(2)                                                  <------------CBF     ----------->HVH21                                                <---------YAB1       ----------->RAV1(2)                   --------->YAB1               <---------AHL20(2)   <---------At4g35610              <---------DAG2                  <----------DOF2        ====================RAV   <-----              <----------DOF2                 --------->TOE2(3) <---------GLK1(2)  <---------ARR14(2)           ---------->ID1               ----------->GT1  --------->ZAT18     <-----------RAV1(1)       <----------DOF2           <---------------AGL15   <---------ZAT14 ------------>CBF <---------YAB1  ---------->DOF2 <---------YAB1<-----------------AGL3   <---------ZAT18 <<<<<<<GRF7<------ZmHOX2a(2)   acagtaaagctttctcctttttgataacaaaatagacaaaaatggaaactttaattgagttcactaaattctcctgacaatgttggatccttaatattaa  7833700                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              ------>NtERF2                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                   --------->ANAC58         <--------    <---------ARR11(3)                                             --------->ANAC58         ---------  --------->ANAC58                                          --------->HSFB2a(2)            <---------ATERF1(1)  --------->ANAC58 --------->ZAT6                           <---------HSFB2a(2)           --------->DEAR3(1) ----AHL20(2)  --------->ICU4                  <------------CBF<------ZmHOX2a(1)         <---------LBD16   aaccaagaaatttagtaatgaacactaacaaaaaatccaaactttgcaaaattgagacacatcgaggagaagcaaaattcaaaaactttacaccggcggc  7833800       <------ZmHOX2a(2)      <---------ARR11(3)      --------->ARR11(3)    <---------HSFB2a(1)  ---------->DOF2 --->RAP2.3(1) --->ATERF1(1) -NtERF2 ---ATERF1(1) ---DEAR4(2) ---RAP2.3(1)           ---------->DOF2 ---ORA47(2)         <----------DOF2 ---ERF1------>ZmHOX2a(2) ->ATERF1(2)        ------>ZmHOX2a(2) --RAP2.3(2)       <------ZmHOX2a(2) --RAP2.3(3)       <---------RVE1(1)               ------>ZmHOX2a(2)                          <------ ->DEAR3(1)       --------->AGP1                 <---------ARR11(3)                        <--------- --ATERF1(2)      --------->ARR11(3)    ------>NtERF2                                    <----------DOF2 --DEAR3(1)       <---------ARR11(3)   <---------RAP2.6(2)<<<<<<<<<TBF1                  <---------DAG2 -ABI4(1)       ----------->ARR10   --------->ALFIN1<----------DOF2              <---------LBD16  <-- >ATERF1(1)--------->DEAR3(1)    --------->ATHB12--------->ARR11(3)          <----------DOF2  <------   gaaggaaagatcgccgatgagatctttaaagagagtgagtggcgacttcgtgatcttttcttcttcagtcagtgagcgtctttctcggctactttacttt  7833900                                 <-------TEIL                            --------->DAG2                                ------->TEIL                           ---------->DOF2                             --------->MYB46(3) ------>ZmHOX2a(1)     <----------ID1                      --------->GLK1(1) ---DAG2             ---------->DOF2                       --------->CCA1(2) --GT1          <---------------AGL15  <---------DAG2      <---------GLK1(1)                ========= ---------GT1   --------------->AGL15  <----------DOF2    <---------ARR14(2)                <------ZmHOX2a(1) ----DOF2    --------->ANAC46<---------------AtSPL8       --------->ARR14(2)             --------->CCA1(2)   ttcctctctctctctactctacaaaaagaaaaaggtccatactttattctctctctaggggatatgtgtgtgaacgaacatatacagatagataggaatt  7834000  Previous    Next  AGI:  At3g22190.1    Description:  IQD5 (IQ-domain 5); calmodulin binding. similar to IQD6 (IQ-domain 6), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G26180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70668.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 7831668    to: 7833519    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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