Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->ANAC58                                                                             <------MYB46(1)                --------->ETT(1)                                             <---------MYB46(3)             <-----------RAV1(1)                                             ----------->GT1             --------->ALFIN1                                                <------MYB83            <---------HSFC1(2)                                      --------->ALFIN1--------->ANAC46            --------->HSFC1(2)               --------->ANAC46     <---------ANAC46  --------->ANAC58 -------->ANAC46<---------DEAR3(1)           --------->ANAC55(2)  --------->ANAC55(2)          ------ -------->ANAC58<---------DEAR4(1)           --------->O2 ------->TEIL    <---------ANAC58     <----- -------->ANAC55(1)             <---------MYB46(3)     --------->HSFB2a(2)<---------ANAC46  --------- ---------ANAC55(2)--------->ALFIN1 <------MYB46(1)    <---------HSFB2a(2)<---------ANAC58 <---------GLK1(2) -------->ANAC58<---------DREB2C(2) <------MYB83    <---------ARR14(2)=============================== --------LBD16  <---------At1g77200<---------AtMYB61--------->ARR14(2)<--------P <---------REM1(2)   gcacggaagttggaagtgtcggtgttgagaagcgttgttggtgttctacgtgaggctctggaccttctacgtgttggcttggttacacggccagtttctg  7818600                                         <-------GAMYB                                        <---------MYB46(3)                                        --------->MYB55(2)                                    --------->ALFIN1                              <---------ATERF1(2)                                                 ---                              --------->DEAR3(1)                                                  <--     ============================================MYC_MYB        <---------MYB46(3)              <----     --------->TGA1a          --------->ATERF1(2)               --------->MYB55(2)           <-------     <---------TGA1a    --------->bZIP60(1)                    --------->ALFIN1             <-------- <-----------RAV1(2)    <---------bZIP60(1)                    <---------AtMYB61       <------MYB46(1) --->HSFB2a(2)       --------->ALFIN1  <---------AtMYB61    <---------DEAR3(1)         <------MYB83 ----HSFB2a(2)    <---------AtMYB61 <---------AtMYB61<-------GAMYB                    <---------AtMYB61 >GLK1(2) --------->GLK1(2)  <---------LBD16        <---------MYB46(3)                --------->MYB59 ==============MYC_MYB----------->GT1<---------MYB46(3)     --------->ALFIN1      <---------HSFB2a(1)   gactcagacgagagtctatggaggtggtatcaccggcagtggtggttgtaacagcggttgaagcggtggtagaagttgtgaagaaggtttggttattgtt  7818700 <---------AGP1                                                  ----------->GT1 ------>HSFB2a(2)                                         --------->LBD16 -------HSFB2a(2)     <--------P   <---------ANAC46      <---------ANAC46 -----REM1(1)        <-------GAMYB <---------ANAC58--------->ANAC58      ----------->GT1        ----- ----RAV1(1)    <---------MYB52(1) <---------ANAC58--------->ANAC58    ---------->DOF2        <------ -YAB1    --------->AtMYB61  --------->ICU4 ---------->DOF2<---------MYB52(1) ---------->DOF2--------   gtagaactgagaccactcgttggggttagccatttttgtgtgtgtctaaagacaagactccgtgagattgtaagaaagaaaaaagcatttgccttcgtta  7818800           --------->AHL20(2)       <---------AHL20(2)                                                                   ------->MYC3      --------->AHL20(1)                                                   <---------MYB52(1)      <---------AHL20(1)                                                  <-------GAMYB     <-------MYC3   --------->AHL20(2)                          ---------->DOF2       ----------->HVH21     --------->ANAC46 <----------DOF2          <---------YAB1  ---------->DOF2            ------>ZmHOX2a(1) <-----------GT1 ---->MYB52(2)   >>>>>>>>>ARR2           <---------WRKY45          --------->YAB1  --------->AHL20(2) ---MYB52(1)   <---------AHL20(2)        <---------WRKY12          <---------ICU4  <---------AHL20(2) ->TOE2(3) <---------AHL20(2)            <---------WRKY38(1)    --------->WOX13(1)--------->AHL20(2)   gttctttatatatttatttgattgtgttttgattaagacttagtcaaaggaaagactattctatatcaatcctgaccgttgatatttaattacacgttga  7818900                                                                <---------YAB1                                                            <---------DAG2                                                       <---------ANAC55(2)                                                       <---------ANAC58                            --                                                       --------->ANAC55(2)                        <--                                                      --------------->AtSPL8                  -------                   --------->TOE2(3)         <-----------GT1<----------DOF2                   <------                   --------->YAB1     --------->DAG2  --------------->AtSPL3                *TSS  ---      <----------DOF2                 <---------TOE2(3)<---------ANAC58      --------->AHL20(2) <----     <---------ANAC58   <---------WOX13(1)----------->GT1 ------->TEIL       <---------AHL20(2) -----     <---------ANAC58 <---------ICU4---------->DOF2  <-----------GT1     --------->ICU4    --------->YAB1   ttttttggctttacatttcattcttaattgccaaaaaaaaaaggttgtaactattttacgtactttattaatacaatgtttaatttgattcgataatatc  7819000                              --------->ANAC46         --------->AHL20(2) --------->MYB52(1)    ----------->GT1       --------->AtMYB61 ------->ATHB12    --------->YAB1 -------YAB1  --------->AHL20(2) -->ARR11(3)  <---------AHL20(1)                                             <------MYB83<----------DOF2 ---ARR11(3)  --------->AHL20(1)      <---------YAB1        --------->AHL20(2)  <------------CBF ------>ICU4  <---------AHL20(2) ----------->GT1           <---------ATHB12 --------->MYB59 -------------AG --------->AHL20(2)  ------------>CBF  ------------>CBF     --------->MYB46(2) ---->YAB1 --------->YAB1--------->ANAC46 XXXXXXXXXXXXXXXXXXXXXXX>MIR405A/B/D<------MYB46(1)   atgatttggaaaataataaaataatagacctcacgaagttacaattagttgagtcttaccaataaactagagtttagtttggtattggctactttcccaa  7819100                                                                                                 ----                                                                                             <------NtERF2                                                                                            ------>NtERF2                                                                                           <---------bZIP60(1)                                                                                           --------->bZIP60(1)                                                                                           <---------ATERF1(2)                                                                                         --------->MYB52(1)                                                                                        ----------->TGA1                                                                                        ----------->HVH21                                                                                      <---------ZAT2                                                                                      --------->At4g35610                                                                              <-----------TGA1   <---                                                                              <-----------HVH21------                                                                   <----------DOF2    --------->ZAT2                     <-----------GT1                               <---------DAG2     <---------At4g35610                    --------->ZAT14               --------->ANAC55(2)        --------->YAB1--------->ATERF1(2)    <-----------------AGL1                        <---------ANAC55(2)  --------->ANAC55(2)--------->RAP2.6(3)  --------->WRKY12  <---------ZAT14  <----------DOF2            <---------ALFIN1   ---------->DOF2 <-   caagttgacgaaattggcccatttcactgtatttgtatgcttttgttgaaatacttaacaagtccctcactttacataatcgtcacaaagctgacggcat  7819200                              --------->YAB1                             <---------YAB1                       <---------RVE1(1)                      --------->ARR11(3)                      <---------ARR11(3)       <---------ANAC58                    <---------TOE2(3)      <---------ANAC58                          <---------ZAT18          --------->ANAC46 --------->YAB1  <---------ANAC58               <---------MYB52(1)        --------->MYB52(1)<-------TEIL  <---------ANAC58                 <---------RAP2.6(3)   <-----     --------->TOE2(3)--------->ARR14(2)<---------ANAC46               --------------->AtSPL3 <------ ----->ARR14(2)     ----------->ARR10   <---------ANAC58        <---------ZAT18      <---------ZAT14 ------ARR14(2) --------->TOE1(3) <---------TOE2(3)             --------->ZAT14      --------->ZAT18 ---->TaMYB80   --------->TOE2(3)<-----------GT1  <---------ZAT2--------->ZAT18      --------->ZAT14 ------TEIL    ----------->GT1<---------ICU4   <---------ANAC58 <---------ZAT14 ---------->DOF2------   atacatttcttaacgaaacgttaagatattcataataacgttgcttcttgcctgcttagtgcttagtgtagtagccgttctatatagcacactaggtact  7819300                                                      <---------TOE2(2)                                                      <---------TOE1(2)                                                      --------->SPL7                                                    <---------SPL7          <---------ZAT14             <---------AHL20(2)      <---------ICU4          --------->ZAT14            <---------AHL20(2)       --------->MYB52(1)          --------->ZAT18            --------->AHL20(2)    --------->YAB1         <---------AHL20(1)  <---------YAB1                --------->ANAC58    --------->TOE1(2)             <---------ARR11(3) ----ANAC55(2)                  --------->ANAC58  --------------->AtSPL3          --------->AHL20(2) -TEIL    <---------ZAT18  <---------------AtSPL8<-----------HVH21   ----------->HVH21             -- --->ANAC55(2)          <---------AHL20(2)--------->MYB52(1)  <-----------GT1     --------->AHL20(1)   taatatgcttagtgtagtagccatattatatggcacgaattaaataacgacggtcgtacgataataacgacatgacatttgctatatattatacatgggt  7819400                                                                       <---------ARR14(2)                                                                       <-----------GT1    <-------GAMYB                                                                       --------->ARR14(2)------>ZmHOX2a(2)                                                      --------->ARR11(3)                <------ZmHOX2a(2)                      <---------AHL20(2)              --------->AHL20(1)        <----------DOF2                      --------->AHL20(2)     <---------YAB1          <---------AHL20(1)--------->ARR11(3)                      --------->AHL20(1) <---------ZAT2              --------->ARR11(3)<---------ARR11(3)               --------->ANAC46          --------->At4g35610         <---------ARR11(3)--------->ARR14(2)     --------->AHL20(2)                  <---------At4g35610    --------->MYB46(3)     <---------ARR14(2)     <---------AHL20(2)     <---------YAB1<---------DEAR3(1)<---------ANAC58 <---------ARR11(1) ------->YAB1  ----------->GT1           --------->ZAT2     <---------ANAC58<---------MYB52(1)   atcatatttaaatatcgacgtaaataaaatatgatacactctcggctgtgattgtatatattgcgaaccaatatatccgtttctttgaagatcgttgcga  7819500  Previous    Next  AGI:  At3g22160.1    Description:  VQ motif-containing protein. similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT4G15120.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73253.1); contains InterPro domain VQ (InterPro:IPR008889) Range:  from: 7817864    to: 7818992    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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