Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ANAC46             <------NtERF2            --------->MYB55(2)                                                 <------MYB83         <------MYB83                                                          <------MYB46(1)         <------MYB46(1)                                                       <---------MYB46(3)        --------->MYB46(2)                                                  <---------ANAC58        --------->MYB111(1)                                                 <------MYB83        <---------MYB46(3)                                                  <---------ANAC46        --------->MYB55(2)                                                  <---------ANAC58        --------->MYB111(2)                                                 <------MYB46(1)        <---------AtMYB61                       <----------DOF2            --------->MYB55(2)     --------->ATHB12                       <------NtERF2                  <---------MYB46(3) <------    <---------YAB1<----------DOF2          <---------LBD16                <---------MYB55(1)  <------ ---NtERF2  <---------MYB46(3)            <---------LBD16             <---------TOE2(3)   <------NtERF2 --->ALFIN1--------->ALFIN1               --------->ETT(1)          ----------->HVH21    <---------MYB46(3) --ANAC58<---------ANAC46              <-----------RAV1(1)      <---------MYB46(3)      --------->ALFIN1 --ANAC58<---------ANAC58        <---------TOE2(3)     --------->ALFIN1  <---------MYB52(1)<---------PCF2 --ANAC46<---------ANAC58--------->ALFIN1 <---------ANAC46     <---------AtMYB61 <----------DOF2 -MYB46(3) <---------ANAC46<------NtERF2<-----------HVH21    --------->ALFIN1 <---------AtMYB61   gggatgatgtttggtggggggtttagggtggggatgaggttttgtcgggggtttagggtgagggtgtggtttgacgttgggtggtttagggtggggacga  7807700                                                              <----------DOF2                              <---------MYB46(3)            <---------MYB46(3)                              <------MYB46(1)            <------MYB46(1)                           <---------ANAC58              <------MYB83                           <------MYB46(1)              <---------AtMYB61                           <---------ANAC46             --------->MYB55(2)                          --------->MYB111(1)           --------->MYB111(2)                          <---------DEAR3(1)            --------->MYB46(2)                  <--------                          <---------MYB46(3)            <---------MYB46(3)             <------MYB46(1)                          --------->MYB55(2)            --------->MYB111(1)            <------MYB83                          --------->MYB111(2)        <------MYB46(1)               <------MYB46(1)                         --------->ALFIN1            <------MYB83                  <------MYB83                         <---------ANAC46           --------->MYB59               --------->MYB46(2)                       <---------MYB46(3)           --------->MYB46(2)            --------->MYB111(2)               <---------MYB46(3)                   <---------AtMYB61             <---------AtMYB61              --------->ALFIN1<------MYB83          --------->MYB111(2)           --------->MYB111(1)              <---------AtMYB61 <----------DOF2     <---------MYB46(3)            --------->MYB59          <------ZmHOX2a(1)<------MYB83  <------NtERF2 <---------MYB55(1)         <---------MYB46(3)      --------->ALFIN1<---------AtMYB61--------->ALFIN1<--------P            <---------TOE2(3) ---TOE2(1)<---------AtMYB61 <---------AtMYB61      --------->MYB111(1)<------NtERF2  --------->MYB111(1) ---TOE1(1)--------->ALFIN1<---------ANAC58    <---------TOE2(3)     --------->ALFIN1<--------P    --   ggtttagggtgaggaggtggtttgatggtgggtggtttagggtggggatgaggtttggtaggtggtttagggtggggatgaggtttggtagggggtttag  7807800                       <------MYB83                       <---------MYB46(3)                       <------MYB46(1)                    <---------ANAC58                    <---------ANAC46                    <---------ANAC58                    <------MYB46(1)                    <------MYB83                   <---------DEAR3(1)                                                               -                   --------->MYB55(2)                                                               <                   --------->MYB111(2)             <------NtERF2                                    <                   --------->MYB111(1)   <---------ANAC46                                         ---                   <---------MYB46(3)    <---------ANAC58                         <------NtERF2  ----                  --------->ALFIN1    --------->ALFIN1                          --------->ALFIN1 ----                  <---------MYB55(1)<---------ANAC58    ----------->GT1     <---------ANAC46     ----               <---------DREB2C(2)  <---------ANAC58--------->ALFIN1        <---------ANAC58    <----            ----------->HVH21     <------NtERF2  <---------DEAR3(1)         <---------ANAC58    -----        <---------MYB46(3)      --------->ALFIN1<---------LBD16          <---------ARR14(2)     -----     --------->ALFIN1 <---------AtMYB61  <---------ANAC58                --------->ARR14(2)    <----- --DOF2<---------AtMYB61 <----------DOF2<------NtERF2 <------ZmHOX2a(1)<------MYB83           <------ ------->ALFIN1<---------DEAR3(1)<---------MYB46(3)--------->ATERF1(1) <------MYB46(1)   ----------->GT1   ggtgagggtgtggtttgacggtgggtggtttagggtgggggtgtcgtttaggcggaggaggttttatagtgggaggtttcgggtggggatgtggtttaac  7807900         <---------AtMYB61    <---------MYB46(3)    --------->MYB55(2)   <---------AtMYB61  <---------MYB52(1) -------->ATERF1(2) ---------ATERF1(2) ---------DEAR3(1)     <---------GLK1(2) ------>MYB52(1)  ----------->RAV1(1) --->GAMYB  --------->ALFIN1                                                                 -------- ----->DEAR3(1)  ----------->HVH21                 ----------->HVH21                       <------NtERF2 ----->ANAC46    --------->ETT(2)   <---------ANAC58                                       --------->At4g35610 --------AtMYB77 --------->ANAC58   <---------ANAC46                                       <---------At4g35610 ---->MYB46(3)   --------->ANAC58   <---------ANAC58                                <-----------RAV1(1) ---->DEAR3(2)  --------->SPL7    --------->MYB55(2)                               <---------ARR14(2) ----At5g28300<---------SPL7      <---------MYB46(3)  <---------AtMYB61         <---------ANAC58 -----GT1<---------TOE2(3)    <---------AtMYB61  --------->ANAC55(2)            <---------ANAC58   cgccggtggtttaggtgggacgacagaatgttttggtggtttgtgaggcttaggtgatggttttggagggctacattcacgagcgtatgtggcagcaaag  7808000                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                     <---------ZAT14               --                                                                     --------->ZAT18              <--                    ---------->DOF2       <---------ARR14(2)         --------->ZAT14              <--           <------ZmHOX2a(1)      <-----------RAV1(1)              <---------GLK1(1)       <---------At4g35610      ------------------------>ANAC81     --------->ARR14(2)    <---------ZAT18     <------ZmHOX2a(1) -->DOF2<------ZmHOX2a(1)        <---------ANAC46            <XXXXXXXXXXXXXXXXXXXXXMIR777  --------->At4g35610   aagttaagaaggaggagaatgagaaaggagaggtttctggtgcgaaaccccatttttgagaagtagtggagttcagtgagtaagtaggaatacagatgcg  7808100           <---------HSFB2a(2)           --------->HSFB2a(2)       <-----------TBP     <---------------AGL15     --------------->AGL15    ----------------->AGL2    ----------------->AGL1    <-----------------AGL3    <-----------------AGL2    ----------------->AGL3 -------->KAN4(2)            <---------RVE1(1)                    <---------GLK1(2) ------->HSFB2a(1)           <---------CCA1(1)        ----------->GT1 --------HSFC1(2)           --------->ARR11(3)       --------->ANAC58 --------HSFB2a(1)          <---------ARR11(3)       --------->ANAC58      <------------------------ANAC81 --------KAN4(1)           --------->YAB1          <---------AtLEC2     <----------DOF2 ------->KAN4(1)          <---------YAB1       <------------CBF   <---------ARR11(3) ------->HSFC1(2)    --------->GLK1(2)      --------->YAB1        --------->ARR11(3)              <-- ---------ARR10     <---------GLK1(2)    <---------CCA1(2)      <---------TOE2(3)            <------- -------KAN4(2) ---------->DOF2       --------------->AtSPL8<------------CBF              <----------   aatgttcccatttatagaaaaagattctatgatatttttgttcgtatcatattgcaaggaaaaattgagattttcttttgttttgttttgtttttctttt  7808200                                                                           <---------ICU4                                    <---------TOE2(3)                      <-----------GT1                                 <---------WOX13(1)                    --------->AHL20(2)                                <------------CBF                     <---------ANAC55(2)                               --------->ATHB12                      --------->ANAC55(2)                            <---------ANAC55(1)                  <-----------HVH21                            <---------ANAC55(2)                 --------->At4g35610        <---------TOE2(3)            ----------->GT1 --------->ANAC55(2)                --------->MYB59           ---------->DOF2   >>>>>>>>>WRKY18          <---------ANAC46                --------->GLK1(2)       ------------>CBF --------DOF2         <---------TOE2(3)--------->CCA1(2)    --------->ARR14(2)    --------->ANAC46 ---DOF2   --------->ANAC58 <---------ANAC58                <---------ARR14(2)    --------->ANAC58 -GT1      --------->ANAC58 <---------ANAC58       ---------->DOF2<---------ZAT18 --------->ANAC58<--   ctttttgacagacaaggaaaatttgagattacgtgattgagatttgatttgattaaagcgcgaatcaggtcacttaattactacaagacaataaaggttt  7808300                            <---------ANAC55(1)                   <---------ANAC58              <------------CBF           ------>ZmHOX2a(1)<---------ANAC46          --------->TOE2(3) --------->ANAC55(2)          --------------->AGL15                <---------------AGL15          <---------------AGL15                <----------DOF2          =================================================================================MADS_MADS         <-----------------AGL1               <-----------------AG         ----------------->AGL1               <-----------------AGL3         <-----------------AGL2  <---------ANAC46         =====================================================MADS_MADS                   <---------ICU4         ----------------->AG <-----------RAV1(1)               <------ZmHOX2a(1)    <---------WOX13(1)         =====================================================MADS_MADS            <<<<<<<<<RAP2.2         <-----------------AGL3  <---------REM1(1)   <---------TOE2(3)            <---------TOE2(3)      --------->GLK1(1)     <---------ANAC55(2)--------------->AGL15       --------------->AGL15      <----------DOF2    <---------AHL20(2)   --------------->AGL15 ----------->RAV1(1)  --------->ICU4     <---------ANAC58 --------->ARR14(2)      =============================================MADS_MADS     <---------ANAC58 <---------ARR14(2)   <---------CCA1(2)   XXXXXXXXXXXXXXXXXXXXX>MIR447C<-------- --------->ETT(1)  <---------ANAC46    --------->GLK1(2)      --------->MYB59     <---------YAB1 ---------RAV1(1)  <---------ANAC58   <---------GLK1(2)<------ZmHOX2a(1)   <---------------AGL15 ----   ttgtcgggctttcctaaattggcgtatattatgtgttgtagattcttatcttttttaggaaaattaggaacaacatactctatttagattgattatgact  7808400                                                                 ------>ZmHOX2a(2)                                              ------>ZmHOX2a(1) --------->GLK1(1)                                              ==========================HOX2a_HOX2a                                              =========================HOX2a_HOX2a                                             --------->TOE2(3)  <------ZmHOX2a(2)                                        <---------ICU4         <---------ARR11(3)             -------            --------->MYB52(1)         <---------YAB1          --------->ARR11(3)  <---------ICU4            <---------DOF5.7(2)       <-----------GT1         ------->GAMYB        --------->YAB1 <--           <---------WRKY38(1)       --------->YAB1       <---------WRKY12        --------->ICU4  --- -YAB1    --------->DOF5.7(2)       <---------YAB1--------->AHL20(2)              <---------ATHB12--- ----->ATHB12                   <---------GLK1(2) <---------AHL20(2)<---------ALFIN1         --------   cattagtttttggttaacggttgaacatatttcagaatattatcattcctaaaaaattgttcaacgatctccactgttcttgaaatcatggtctaaaaag  7808500                                                                 --------->YAB1                                                                <---------YAB1                                                             --------->AHL20(2)                             ---------->DOF2                 <---------YAB1                          --------->ANAC58                   <---------AHL20(2)     <---------TOE2(3)    --------->ANAC58              --------->LBD16 -->DAG2                ---------->DOF2                --------->ANAC46 -------ZAT18         <---------YAB1                   --------->LBD16 ------>ZAT14       --------->YAB1                    <---------LBD16 ------>ZAT18      <---------YAB1 <----------DOF2     <------NtERF2 -->DOF2         --------->WOX13(1)               <-----------HVH21                 <-----------GT1 <   tgcaatctaggttacaagtctatcataaaagcaaagctttaaatcagagaaatgtccccgcatattattatcaagctctaggctattaacctagtctgta  7808600  Previous    Next  AGI:  At3g22142.1    Description:  structural constituent of cell wall. similar to CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN), lipid binding [Arabidopsis thaliana] (TAIR:AT3G22120.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77497.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Extensin-like protein; (InterPro:IPR003883); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic protein, helical; (InterPro:IPR013770) Range:  from: 7803611    to: 7808053    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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