Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    <------MYB83                                                  <------MYB46(1)                                                 --------->MYB46(2)                             =====                                    --------->AGP1----------->GT1                        --------->LBD16                                    --------->ARR14(3)                                <------ZmHOX2a(2)                                    <---------ARR14(3)                                ===============                                    --------->ARR14(2)                                --------->CCA1(2)                                    <---------ARR11(3)                               --------->ARR11(3)                                    --------->ARR11(3)                               <---------ARR11(3)                                    <---------ARR14(2)                               <---------ARR14(2)                     ------>ZmHOX2a(2)           --------->MYB59                     --------->ARR14(2)                    <---------At4g35610          <---------MYB46(3)             <<<<<<<<<<AtWER <----                    <------ZmHOX2a(2)           <---------MYB55(1)            <---------ZAT2   <-----                    --------->At4g35610        <---------MYB52(1) <---------MYB52(1) --------->AGP1 ------->ANAC46    --------->ARR14(2)       <---------MYB52(1)   <-----------HVH21  --------->GLK1(1) ------->bZIP60(2) <---------ARR14(2)      --------->LBD16      --------->DEAR3(1)  <---------GLK1(1) ------->ANAC58    <---------ARR11(3) ------>ZmHOX2a(2) --------->YAB1        --------->ZAT2   ------ ------->ANAC58    --------->ARR11(3)<------ZmHOX2a(2)  <---------ICU4        <-------GAMYB   ======= -------LBD16  --------->LBD16     --------->GLK1(1)    -------->HAHB4    --------->ANAC46    <------ ------ALFIN1 <---------LBD16     ----------->ARR10    --------->ICU4  ----------->HVH21<---------HSFB2a(2)   cacggcatgagtttctccagggatctgattttgtctgagatcttccgtcgtttggtaataataccaccgtcgtttgacgcagttggagatccagaggttg  7784100                                      <------NtERF2                                     ------>NtERF2                                     --------->LBD16                                    <---------ANAC46                                   <---------LBD16                                   --------->ATERF1(1)                                   <------NtERF2                                  <---------DEAR4(2)                                  <---------RAP2.3(1)                                  <---------ERF1                                  <---------RRTF1(1)                                  <---------RAP2.6(1)                                  <---------ATERF1(1)                                  ------>NtERF2                                 <---------ATERF1(2)                                 <---------RAP2.6(2)                                 <---------RAP2.3(2)                                 <---------RAP2.3(3)                                 <---------DREB2C(2)                                 <---------RRTF1(2)                                 <---------RRTF1(3)                                 <---------ANAC46                                 --------->ATERF1(2)                                 <---------DEAR3(1)                                <---------LBD16                            --------->ALFIN1                                                 --------                            <---------MYB52(1)                                    <---------ARR14(2)                          <---------ANAC58                                      <---------MYB46(3)                          <---------ANAC58                                      <---------DEAR3(2)                          <---------ANAC46                                     <---------TOE1(2)                          <---------TGA1a                                      <---------DEAR3(1) ===================================MYC_MYB                                    <---------TOE2(2) ===========HOX2a_HOX2a  <---------TOE2(3)                                    <------NtERF2  <------- ---GAMYB              ----------->HVH21                                     <-----------HVH21 <----- ----MYB46(3)        --------->At4g35610                             <-------TEIL --------->ARR14(2) --->MYB111(2)   <---------TOE1(3)<---------ORA47(2)    --------->CCA1(2)   <---------DEAR3(1)------>NtERF2 ===================================MYC_MYB     <------ZmHOX2a(1)   <----------DOF2          <------- --P <------ZmHOX2a(1) ----------->TGA1      <------ZmHOX2a(1)    --------->At4g35610      ------->GAMYB   ttgaagaggaagttgagttaagcttctgacgtttggcggcgggaagaggaggagagagagatggaaacagcttcatcgtcgtcggttcttcaacggcgtc  7784200                                             <---------MYB46(3)                                            <---------AtMYB61                                         <---------AtMYB61                                         <---------DEAR3(1)                                         --------->ALFIN1                                       <---------MYB46(3)                                      <---------AtMYB61                                      <---------DEAR3(1)                                      --------->ALFIN1                                    <---------MYB46(3)                                   <---------AtMYB61                               ----------->GT1                                <---------AtMYB61                             --------->ZAT18                         --------->MYB52(1) --------->ALFIN1                  <---------ZAT18                        <---------ARR14(2)<---------MYB46(3)                  --------->ZAT14                    ----------->GT1<---------DEAR3(1)       ---------->DOF2   <---------ZAT14                   --------->ALFIN1--------->ALFIN1   <-------GAMYB          --------->ALFIN1                 <------MYB46(1)--------->ALFIN1    <------NtERF2--------->At4g35610       --------->GLK1(2)                 <------MYB83  <---------ZAT14    <---------bZIP60(1)     <XXXXXXXXXXXXXXXXXXXXXMIR472 ->DEAR3(1)     <---------AtMYB61<---------ANAC46 <---------ANAC46     <---------ZAT6      --------->ARR11(3) --DEAR3(1)   <------ZmHOX2a(1)--------->ZAT14    --------->bZIP60(1)<---------ANAC46      <---------ARR11(3) -NtERF2  <------ZmHOX2a(2)   --------->ALFIN1   <------NtERF2   --------->ZAT2    <---------ANAC46 --ANAC46--------->ARR11(3)   <---------ANAC46 <---------ANAC46  <---------At4g35610      --------->RVE1(1)   gatggatttgagatcaggaaggtggagaaacggtgtggtggtggtggtggtgtcgtcgttgtgaaagagctgagtgtgagtggagtcgtaaaaaatctgt  7784300                                                                                      <------MYB46(1)                                                                                 <------NtERF2                                               --------->ZAT14                  <---------LBD16        --------->ZAT14                        <---------ZAT14                 <---------DEAR3(1)        <---------ZAT14            <------ZmHOX2a(1)                           --------->ETT(1)        --------->ZAT18          <---------TOE2(3)      <------ZmHOX2a(1)  <---------AtMYB61        <---------ZAT18   <------NtERF2        <---------ZAT18          --------->ALFIN1--------->ALFIN1 --------->ANAC58         ----------------->AGL1 <---------ANAC46    <---------TOE2(3)<------MYB83 --------->ANAC58        ------>NtERF2         --------->ZAT18 --------->DAG2  <---------LBD16<------ --------->ANAC46    --------->ALFIN1         --------->ALFIN1---------->DOF2<-----------HVH21<------   tccaagcgagtggactcagagagatggtgccgattgaggagagacagagtggagtcgaggaaggaaaagtcgaggttgtggtcggggaaggtgaaggcgt  7784400                                 --------->ANAC58                                 --------->ANAC58                                       ----------->GT1                               <--------P                                               <----------ID1                             <---------MYB46(3)                                        ----------->GT1                            --------->ALFIN1                                        ---------->DOF2                            <---------AtMYB61                                     ----------->HVH21    ----------->GT1      <---------DEAR3(1)                <---------ZAT2       ------>NtERF2   <------ZmHOX2a(1)     --------->ALFIN1                  --------->At4g35610  --------->LBD16 ---ANAC58           <------ZmHOX2a(1)                     <---------At4g35610 <---------DEAR3(1) ---ANAC58        <------ZmHOX2a(1)                   --------->YAB1          <---------LBD16 -------   tggaaggagtgaaatcggaaggaggaagcggtggtaagtcagtgagtgagtcgaaatcgtaagctggtgtctccattttctccggcgaaagggaaaaaac  7784500                                                                         <---------YAB1                                                                       ----------->GT1                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                 <-------MYC4                                                                 ------->PIF5                                                                 ------->MYC4                                                                 <-------MYC2                                                                 <-------PIF5                                                                 ------->MYC3                                                                 <-------MYC3                                                                 ------->MYC2                                                                <---------O2                                                                --------->TGA1a                                                                <---------TGA1a     --------->ALFIN1                                                                --------->ANAC46  <---------ANAC58                                                                --------->O2      <---------ANAC46                                                                =====================================                         ----------->HVH21                      >>>>>>>>>>HY5     <---------ANAC58                       <---------ANAC58                         <---------PIF3(3)<---------MYB46(3)                       <---------ANAC55(2)                <---------GLK1(1)   <------------CBF                       <---------ANAC46                   --------->CCA1(2)  --------->ATHB12     ---                       <---------ANAC58                   --------->GLK1(1)  <---------ICU4     =====     <------ZmHOX2a(1) <---------ANAC55(1)               <---------ARR11(3) <---------YAB1      -----    ----------->GT1    --------->ANAC55(2)    --------->AHL20(2)--------->PIF3(3)--------->MYB55(2) -->MYB52(1) --------->YAB1    <---------ANAC46          --------->ARR11(3) --------->ICU4--------->CCA1(2)   agagagaggagaaaatgagaatgatgcgtgactgtgtgaagaagagaataaaacagagagatatccacgtggcttgtgattattgggtggagatagaaga  7784600                                                                     <---------O2                                                                  <------NtERF2                                                                 ----------->RAV1(1)                                                                 ------>NtERF2                                                                --------->DEAR3(1)                                                                ----------->HVH21                                                               --------->ATERF1(1)                                                               --------->RRTF1(1)                                <---------ANAC46              <---------RAP2.3(1)                                <---------ANAC58              ------>NtERF2                                <---------ANAC58              <---------ATERF1(1)                                <------------CBF              <---------DEAR4(2)                            <-------MYC4                      <---------ERF1                            ------->MYC4                     <---------DEAR3(1)                            ------->PIF5                     --------->ATERF1(2)                            <-------PIF5                    --------->ATERF1(1)                            ------->MYC3                    <------NtERF2<------ZmHOX2a(1)                            <-------MYC2                   <---------DEAR4(2)                            ------->MYC2                   <---------RAP2.3(1)                            <-------MYC3        <-------GAMYB<---------RAP2.6(2)            =========================bZIP_DOF  --------->ALFIN1<------NtERF2         <---------TOE2(3) --------->ANAC46  <---------ANAC58<---------RAP2.3(2)    <---------ICU4         --------->O2      <---------ANAC46<---------ANAC46             <---------MYB52(1)   --------->AHL20(2)      --------->TGA1a  <---------MYB46(3)<---------ORA47(2)         <-------GAMYB   <---------AHL20(2)      <---------TGA1a<---------WOX13(1)<---------ABI4(1)            ============   <---------ATHB51        =============================MYC_MYB--------->RAP2.3(1)      <---------ANAC55(2)   --------->ICU4    --------->CCA1(2)   <------------CBF  <---------ATERF1(1)          --------->ANAC55(2) ======bZIP_DOF     <---------ARR11(3)  --------->ATHB12  <---------DEAR3(1)            ----------->GT1 -------->GT1       --------->ARR11(3)  <---------MYB46(3)--------->ALFIN1           --------->ARR14(2) ====================================bZIP_DOF<---------ANAC58<---------RAP2.3(3)     <---------ARR14(2) ----->DOF2 ---------->DOF2<---------O2<---------YAB1    <------ZmHOX2a(1)           --------->GLK1(2)   aagaaataattaagaaaagagagatatacacgtggattgtggtgattgggtgttgaagaggaggcggcgacacgaggaacgaagacgattccgttatatg  7784700                            <-----------HVH21                            <-----------TGA1                           =================MYC_MYB                           --------->bZIP60(2)                           =====================bZIP_DOF                           <---------TGA1a                           --------->TGA1a                           --------->O2 <---------LBD16                    ----------->HVH21   <-----------RAV1(2)                   --------->LBD16   <---------ARR14(2)                   <------------CBF    -------                 <---------LBD16    <-------GAMYB                     <---------MYB52(1)      <------              <-----------HVH21    <---------DEAR3(2)       --------->GLK1(2)    <---------ANAC46             <-----------RAV1(1)  <---------DEAR3(1)        --------->ARR14(2)   <---------ANAC58             =============================RAV               <---------ARR14(2)   <---------ANAC58           <---------MYB52(1) <-----------RAV1(2)          <---------GLK1(2)     <---------LBD16 <---     <---------ETT(2) ------>NtERF2<---------MYB46(3)   --------->HSFB2a(2)     <---------LBD16------     --------->ETT(2)<---------ALFIN1<----------DOF2 --------->ICU4  <-------GAMYB --------->LBD16 ====================================MYC_MYB  <------------CBF      <---------MYB46(3)    <---------ZAT14   ttttttgtcgactgtttgtcgcgcgaccctcgtcaggcggtttcagggtattgtacttatggaatctgggccgttggattgtttcggggtattgtactga  7784800                                                                                             <-------                                                                                             <-------                                                                                          <---------ANAC55(2)                                                                                          --------->ANAC55(2)                                                                                         <---------LBD16                                                                       <---------ANAC58 --------->MYB52(1)          --------->TOE1(2)    --------->At4g35610                     <---------ANAC58 <-----------GT1 -->ICU4 <---------HSFB2a(1)   <---------At4g35610                  <--------P        <----------DOF2 ---YAB1 --------->HSFB2a(1) <-----------RAV1(2)                <-----------RAV1(2)<---------YAB1 ------WOX13(1)             <------ZmHOX2a(2)   ----------->HVH21>>>>>>>GRF7    --------->GLK1(2) --->ATHB12        <---------YAB1          ------>ZmHOX2a(2)  <-----------HVH21<---------GLK1(2)   ttgaatatggaacgttggattatgtttacgatcagatgatactgatcccatggacagggatgtttgtcaggttgcgaaacaaattctgatttacggattg  7784900                                                 =================bZIP_DOF                                                 <---------TGA1a                                                 --------->bZIP60(2)                                                 --------->ANAC58   ----------->HVH21                                                 --------->TGA1a   --------->At5g28300                                                 <---------O2   ------>MYB83                                                 ========================MYC_MYB                                                 =========================MYC_MYB                                                 ==================================================bZIP_DOF                                                 ======================================bZIP_DOF                                                 =============================MYC_MYB                                                 --------->ANAC46 ------->GAMYB                                       <------NtERF2            -------->P                                      ------>NtERF2        <-----------GT1                                     <---------DEAR3(1)<----------DOF2         --------->YAB1           <---------LBD16--------->ANAC58<------------AtMYB77        --------->ICU4            <---------ANAC46     <---------DAG2       ---------->DOF2   --------->YAB1                <---------LBD16 --------->O2   ------>MYB46(1)  --------->GLK1(2) --ARR14(2)         ---------->DOF2<---------LBD16 <---------MYB52(1) --------->RAP2.6(3)      ------ --GLK1(2)          =======================================bZIP_DOF<-----------HVH21    ---------->DOF2   tgccatcgtaatgatgttactgaaaagttttttttttcgggggcgatagccacgttacttttctccaaccgtgactgcaaaagtttctgttaaagagatt  7785000  Previous    Next  AGI:  At3g22100.1    Description:  basic helix-loop-helix (bHLH) family protein. contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 7783718    to: 7784476    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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