Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <------ZmHOX2a(1)                                                  ======================= -------->HAHB4                                                            <-----------GT1 --------->YAB1                                                      <---------YAB1 ---------YAB1                                <---------TOE2(3)    --------->YAB1 ------>YAB1                            --------->ARR11(3)        <---------YAB1      <---------YAB1 --->TOE2(3)                            <---------ARR11(3)    --------->YAB1  --------------->AGL15   taataatagactaggagtcttatgtataaatgctagggagaagatgttgatgttgtaatctccatcatatgataatttaaccaaaaatatgaaaaacctt  7729400                  <---------DOF5.7(2)              <---------ICU4                --------->DOF5.7(2)                -------->HAHB4               --------->TOE2(3)                   --------->YAB1         <-----------GT1                          --------->ICU4             <----------DOF2        <---------AHL20(2)                      <--------HAHB4              <---------------AGL15        --------->AHL20(2)                      <---------ICU4              --------------->AGL15   --------->AHL20(2)                          --------->ICU4               --------->TOE2(3)   <---------AHL20(1)                   <---------ICU4                     ----------------->AGL2   --------->AHL20(1)                   --------->ATHB51                   ----------------->AGL3   <---------AHL20(2)                   --------->ATHB12        <-----------GT1  --------->AHL20(2)                   --------->ICU4         <---------AHL20(2)  <---------HSFB2a(2)  <---------AHL20(2)                   <---------YAB1         --------->AHL20(2)  --------->HSFB2a(2) ===========================================================================================MADS_MADS   gtaattttatttaactacgttatcgaaactatattgccttcattattgcataattatgaagtatttaaactagacaaaccttttttagaaaaaacaaaac  7729500                    <---------DAG2           <---------DEAR3(1)                    <----------DOF2  ------>ZmHOX2a(1)              <------------CBF   --------->ANAC58 <------NtERF2                                 -----      <----------DOF2          <---------ALFIN1--------->RAP2.3(1)                        <----------DOF2    ------->TEIL <-----------GT1 --------->ANAC58------>NtERF2         ------>ZmHOX2a(1)  ------>ZmHOX2a(1)   tagacgaacttttgaatattgactttttcatcggcactcctctctcatcggcgcaaataccaagtctcaactcctaactcccctctcatgtcctttacaa  7729600                                                                                                 ----                                                                <---------ICU4                   <---                                                                --------->YAB1                  -----                                                                -------->HAHB4                  -----                                                                --------->ATHB12                -----                        <-----------HVH21                      --------->ICU4              <---------ARR14(2)              --------->HSFB2a(2)                --------->MYB46(3) ----------->GT1        --------->ARR14(2)           <----------DOF2                  --------->YAB1     <---------YAB1             <---------CCA1(2) ---->ANAC46  <---------HSFB2a(2)        <------------CBF    --------->YAB1             --------->YAB1   accaaaaacatttcttttagaaaatttgtcatgtataaccaagaattgataacaaacattctataatgattagaaaatagaacttaaaaatcatatccac  7729700                                                         --------->TOE2(3)                 <---------                                                         <---------MYB59                  -----------                                                      <-----------GT1                    --------->DAG2         <---------ARR14(2)                         <---------MYB52(2)         <---------MYB52(1)         --------->ARR14(2)                      <---------YAB1--------->AHL20(2)       ---------->DOF2     --------->YAB1                      <---------ARR14(2)------>MYB83       <-------GAMYB---------- -------->CBF        ------------>CBF    --------->ARR14(2)------>MYB46(1)   <---------MYB46(3) ------ATHB12  --------->LBD16 --------->YAB1------>ZmHOX2a(1) <---------AHL20(2)  ----------->GT1 ---->ANAC58  --------->LBD16  <---------ICU4<----------DOF2  <---------AHL20(2)  <---------ANAC46 ---->ANAC46 --------->LBD16   --------->ANAC46 ------------>CBF           <-----------HVH21 -------- ---->ANAC58<---------LBD16  <-----------GT1--------->TOE2(3) --------->AHL20(2)  ----------->GT1   tcaatattcaaaatccccgagtcttcaatataaacatcactcaaatcctttacaattaacctaatttaaaaaacatccgtcgttggggaaaaaaggagaa  7729800                                                                    <---------ANAC46                                                                    <---------ANAC58                                                      <----------DOF2--------->LBD16                                                 ------>ZmHOX2a(1)  <---------ANAC58                                                <---------ANAC58   --------------->AtSPL3 -ID1                                           <---------ANAC58 ------------------>SPL14 ------------->ANAC81                       <------MYB46(1)     --------->GLK1(1) ->GT1------------>CBF                      <------MYB83        <---------GLK1(1) --->GT1   <---------ARR11(3)              --------->MYB59   <---------YAB1          <-----------GT1   aaatcaaaaacaatgtcttcatcgtctgcatcaaaacttcttggttcggtccttgtctttgctatgatttccgtacaaatcgtttttatacactgtgtta  7729900                                               <---------ALFIN1                                               ----------->RAV1(1)                                              --------->ANAC46            --------->AtLEC2                                  <---------ATHB12                     <-----------------------TaNAC69(2)                              --------->MYB46(3)                 <---------WRKY38(1)                            ------>MYB83     ----------->RAV1(1) <---------WRKY12             <------                            ------>MYB46(1) --------->ANAC46    --------->WRKY18(1)      ------------                          <---------MYB59--------------->AtSPL8<-----------HVH21 --------->TOE1(2)                          --------->AtMYB61--------->ZAT18    ------->GAMYB   --------->ANAC46<------                   --------->At4g35610 <-----------GT1       --------->MYB46(3)  <---------LBD16  <--   tgtccctgaatgaaaccaattcgctgaaccaaaccaatgtttatctgcaccacatatgcatcaacagtcaagggacatacaaaccagggagtccatacga  7730000                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                -----                                                                                         <---------MYB52(1)                                                                                       --------------                                 --------->YAB1                                        <-------------                    --------->LBD16                                                   <--------------          ------->GAMYB    <---------ARR11(3)                                         ---------------    --------->TOE1(3)      --------->ARR11(3)                                         <--------------    --------->TOE2(3)--------->AtLEC2                                                 <-------------- ---TOE1(1)        <---------ANAC58                   <---------ANAC46                <-------------- ----->AGL1        <---------ANAC46                   <---------ANAC58                --------------- ---TOE2(1)  <-----------HVH21--------->WOX13(1)      <---------ANAC58--------->YAB1  --------------- ----ZmHOX2a(1)    <---------ANAC58             <---------TOE2(3)    <---------ATHB12 ---------------   ggaaaacctcaaccgtgtcatccgtgcaatatctatcacaatttctaactatggtttcgttcatggttccaatggtgatgctcccaataccgtttttgga  7730100 ------->At4g35610 -------HSFB2a(1) ------>HSFB2a(1) ----->DOF2 ->AGL15 --AGL15                                                                                    <-------TEIL ---AG                                                        --------->LBD16           <---------TOE2(3) -->AGL1              <---------ANAC58                       <---------TOE1(1)     <---------ICU4 ---AGL2      ------>NtERF2                            <----------DOF2             -------->ATHB1 ---AGL1   --------->At4g35610                   --------->DEAR3(1)               <---------AHL20(2) ---AGL3   <---------At4g35610      <---------At4g35610<---------DAG2             --------->AHL20(2) -->AGL3  >>>>>>>GRF7 <---------ANAC58           <---------ALFIN1                 <---------YAB1 -->AG <-----------HVH21            ------>NtERF2--------->AtMYB61  --------->DAG2--------->AHL20(1) -->AGL2 <-----------RAV1(2)    --------->ALFIN1--------->MYB46(3) ---------->DOF2--------->ICU4  ---   aagctccaatgtcaggcgactcttacttgtccaagtgccgctcttgcctcaccaccgctttctccgaggtaaagtagtttgaaaattattaagtttcatg  7730200                                                               XXXXXXXXXXXXXXXXXXXX>MIR863-5P                        <---------ATHB12                      <---------ANAC55(2)                   <------MYB83                               <---------ANAC46                 <--------P                                   <---------ANAC58                 <---------MYB55(1)                           --------->ANAC55(2)                <---------MYB52(1)                            <---------ANAC55(1)               <---------MYB46(3)                             <---------ANAC58                  <----           <---------ALFIN1  <---------ZAT14                <-----------GT1          ------>ZmHOX2a(2)          --------->ZAT14    --------->ZAT14            <---------ARR11(3)          <------ZmHOX2a(2)          <---------ZAT14    --------->ZAT18            --------->AHL20(1)         --------->ARR11(3)      --------->ZAT6    --------->ICU4                 <---------CCA1(2)           --------->ARR14(2)    <-----------GT1<------MYB46(1)                  --------->LBD16                <---------ARR11(3) ---->TEIL<---------REM1(2)------->TEIL            <---------ANAC46                <---------ARR14(2)   aacttctaactctacaccggttggcaatgaatgcactgtccaatgtccatgccccgtatatattacgttttgtccatctcaatgggatcttaacacatct  7730300  Previous    Next  AGI:  At3g21940.1    Description:  receptor protein kinase-related. Identical to Putative cysteine-rich repeat secretory protein 22 precursor (CRRSP22) [Arabidopsis Thaliana] (GB:Q9LRL7); similar to receptor-like protein kinase-related [Arabidopsis thaliana] (TAIR:AT3G21960.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73036.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902) Range:  from: 7729813    to: 7731178    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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