Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                            <--------                                --------->ARR11(3)                                          ---------                     --------->AHL20(2)                                                     ---------                     <---------AHL20(2)                                                    --------->RVE1(1)                    --------->AHL20(2)                                                   --------->AHL20(2)                <---------AHL20(2)                                                  --------->ANAC46                --------->AHL20(2)        ---------->DOF2                         --------->REM1(1)--           <-------TEIL         <---------GLK1(2)                             <---------ANAC58    --- --->TOE2(3)   --------->AHL20(2)     --------->TOE2(3)                       <---------ANAC58    <--   taaaattctaagcttcataaaattaaaattttcagatttttcttaaaagaaaattgcataaaaaccctagaatatttatagcttacaccaaaaaaatcta  7709300                                                                               --------->At1g77200                                                                               --------->DEAR3(1)                                                                          <-----------HVH21                                                                         --------->bZIP60(1)                                                                     --------->MYB46(3)                               <---------ARR11(3)                  ------>NtERF2--------->MYB52(1)                           <---------ICU4                         <---------ETT(1)                          --------->ICU4                          ----------->HVH21                          <---------YAB1                          --------->DEAR3(1)--------->At5g28300  --------->YAB1   --------->ARR14(2)                     --------->ABI4(2)    ----------->HVH21 --------ICU4      <---------ARR14(2)                     --------->MYB55(2)  --------->MYB46(3) -ARR11(3)         <---------GLK1(2)                      <---------MYB46(3)  --------->DEAR3(2) >GLK1(2)       --------->ANAC58                         <---------AtMYB61<-----------TGA1     ------ >ARR11(3)      --------->ANAC58                      <---------DEAR3(1) --------->O2         <------ ------->YAB1   --------->ANAC46                    <---------ALFIN1 --------->SPL7----------->GT1 ------>ICU4<---------MYB52(2) --------->ARR11(3)  <---------REM1(2) --------->DEAR3(2)       ------- -------ATHB12--------->MYB52(1)      <---------ZAT18 --------->ANAC46   <---------bZIP60(1) <-------   ataatcagagaaaaacaaacggaacctcatgattatcttgttcacttctattctccacggtggtttctccgaccgtcgtcaccgacggtaaaacaacgtg  7709400                                                                 --------->TGA1a                                                                 <---------O2                                                                 <---------TGA1a                                                                 <---------ANAC55(1)                                                                 --------->O2                                                                 <---------bZIP60(2)                                                                 <---------ANAC46                                                                 --------->ANAC55(2)                                                                 <---------ANAC55(2)                           <---------ANAC46                      <---------ANAC58                      <---------DEAR3(1)                         ====================================                      --------->DEAR3(1)                      <---------SPL7                      <-------PIF5                           ==============bZIP_DOF                      ------->PIF5                           <----------DOF2                     --------->ATERF1(1)                     <---------DAG2                     --------->DEAR4(2)                    ------>NtERF2                     <------NtERF2                        --------->ANAC58                     --------->DEAR3(2)                   --------->ANAC58                    <---------ATERF1(1)                   --------->ANAC46              --------->O2 <------NtERF2                 <-------MYC2              --------->TGA1a                            <-------PIF4              <---------TGA1a                            ------->PIF5                               -              =======================bZIP_bZIP           <-------PIF5                               <              <---------O2 =============================================bZIP_DOF    <---------ARR14(2)            ------>NtERF2  --------->TGA1a               ------->MYC3               --------->ARR14(2)        ------>ZmHOX2a(2)  <---------ANAC58              ------->PIF4              --------->HSFB2a(1)       --------->GLK1(1)   <---------TGA1a               <-------MYC3              <---------HSFB2a(1)       <---------GLK1(1)   <---------ANAC58              ------->MYC2              <---------HSFC1(2)    <---------YAB1  --------->MYB52(1)                  --------->ANAC58       ----------->GT1     <-    --------->ICU4<---------ABI4(2)  ----------->HVH21  --------->ANAC46    --------->STY1(2)      -- --->ALFIN1----------->HVH21      --------->GLK1(2)     <---------ATERF1(1)--------->ANAC58        <- -MYC3--------->ARR11(3)  ------>NtERF2         --------->ZAT18  <---------ANAC58  --------->HSFC1(2) >MYC3<---------ARR11(3) <---------ANAC46       <-------TEIL<------NtERF2  --------->ANAC58       --- --ANAC46  --------->DEAR3(1)  --------->MYB52(2)       --------->ANAC58   --------->ANAC46      ----   gaagtcatgatctccgacgaggcaccggcgcgtgagtttctgacaagaagtgcatagcacgcgccttacgtgtctccaagctagaaaattcgctccatga  7709500                                                          --------->ARR14(2)                                                         --------->ATERF1(1)                                                         <------NtERF2                  --------->ZAT6                                      <-----------HVH21 <---------ATERF1(1)             <---------ALFIN1     <-----------HVH21                <----------DOF2 --------->ATERF1(1)               <---------HSFB2a(1) --------->MYB52(1)                 <------NtERF2     <------NtERF2                    --------->ZAT14 -------->P                         <---------At4g35610<---------ANAC58             --------->LBD16 ------>MYB46(1)                    --------->At4g35610<---------ANAC58            <---------HSFB2a(2) ------>MYB83                     --------->ZAT18--------->ANAC58                  --------->HSFB2a(2) =========MYC_MYB                 <---------ZAT18--------->ANAC46                -------->P -------->MYB55(1)              <---------ARR14(2)   <---------ATERF1(1)   <---------ALFIN1 ---------ALFIN1                --------->ARR14(2)  <---------DEAR3(1)--------->At4g35610 --------ABI4(2)              ------>NtERF2      --------->ANAC58     <---------At4g35610         <-- ------->MYB46(3)            --------->DEAR3(1) <---------LBD16    ---------->DOF2<---------LBD16 <-- --------MYB55(2)         --------->ANAC58    --------->ZAT14 <-----------HVH21  --------->MYB52(1) ------>DEAR3(2)          --------->ANAC58    <---------ZAT14--------->ANAC46 <---------DAG2  <------ --->TEIL              <------ZmHOX2a(1)  --------->ANAC46<---------ARR14(2)  --------->AtMYB61   <--   acccaccggtcacattttctacagaggaacgccgagtccgcttcacagaacacggaggcgtctccgtcgcaaagctcacaccttaccggaacactcggtc  7709600                        --------->ANAC46            ------>NtERF2                             --------->ANAC58          <---------LBD16<-----------TGA1             --------->ANAC58                            <--        --------->GLK1(2)<-----------HVH21      <---------ICU4                                    <-- --------->ZAT14      ------>ZmHOX2a(1)        --------->ICU4                            ------>ZmHOX2a(2) <---------ZAT14  ------->GAMYB          ----------------------->TaNAC69(2)            <---------AGP1 -------ANAC58    --------->AtMYB61  --------->At4g35610                           <---------ANAC58 -------ANAC46   --------->MYB46(3)  <---------At4g35610      <---------ALFIN1     <---------ANAC58 -----HVH21 --------->LBD16       <---------At4g35610 --------->ANAC46 <-----------GT1 <---------ARR11(3) -------ANAC58  -------->P<---------MYB52(1)   <---------YAB1<---------REM1(2)  <----------DOF2<-----   tcgtgcagagactccggcaacctcctccgtcacttcttctgctctcttcattattcaagcctctacacatttttctcaatctctttcttgatctgtttca  7709700                                  --------->CCA1(2)                                 --------->ARR11(3)                                 <---------ARR11(3)                                 --------->ARR14(2)                                 --------->ARR11(1)                          ---------->DOF2                               --------->GLK1(2)           --------->HSFB2a(2)   <---------ARR14(2)            <---------AHL20(2)               <----    <----------DOF2      <------ZmHOX2a(1)                     --------->AHL20(2)            <------- --------DOF2          <---------TOE2(3)            --------->TOE2(3)  <---------GLK1(2)     -------- -------DAG2     --------->ARR11(3)     *TSS <------ZmHOX2a(1) <-----------TBP    <----------DOF2 ------GT1 <---------HSFB2a(2) ----------->ARR10   ----------->GT1    <------ZmHOX2a(1)     <--------   ctttctctttcttctgggtgatattgaggaaagaagatttgggaataggagaaacgtttatacatttatataggaatcttatttctttaaaactaatgat  7709800                          --------->ALFIN1                         <-------MYC4                         ------->MYC4                         <-------MYC3                         ------->MYC3                         ------->MYC2                         ------->PIF5                         <-------PIF5                         <-------MYC2                        <---------TGA1a                        --------->TGA1a                        <---------O2                        --------->O2                               <---------YAB1                        <---------ANAC55(2)                     --------->ICU4                        <---------ANAC46                 ---------->DOF2               <---------MYB46(3)                    <---------ANAC46    <-----------RAV1(1) ============================================bZIP_DOF     <---------MYB52(1) -----ANAC46   <-----------RAV1(1)                   --------->ANAC55(2)         --------->DOF5.7(2) --ATHB12   <---------MYB46(3)                       <---------ANAC55(2)        --------->TOE2(3) ->ICU4<---------ANAC46------------>OsbHLH66<---------MYB52(1)----------------->AGL1          ------- -TOE2(3)<-----------RAV1(1)     ------->TEIL       <---------TOE2(3)          ----------->GT1<------   gtgtttgtgttgtgttgttgttggacacgtggatgaatcttgccctgttattttgacgtaaatgcccttatgagggcaaaatcgttaatttcaaaattaa  7709900                       <---------ETT(2)                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)             --------->ANAC58           ---------->DOF2                    --------->TOE2(3)         ------>ZmHOX2a(1)                    <----------DOF2         =================HOX2a_HOX2a         --------->TOE1(3)         ================HOX2a_HOX2a  --------->ANAC58 -->AHL20(2) --------->ANAC58         --------->ANAC58 ---AHL20(2) --------->ANAC46        --------->PCF2                    <---------MYB52(1)      <-----   aaacgcttctcctccaagcgatctctcgacctcatattggacgcacaactttaaaattttcgaaacaaactccgtttttttttttttgcaaatcgaaaca  7710000                                   --------->AtMYB61                                   <---------ALFIN1                                  --------->MYB46(3)                                 ------>MYB83                                 ------>MYB46(1)                                <---------ALFIN1                                --------->MYB55(1)                                --------->ANAC46                               <---------MYB55(2)                               <---------MYB111(2)                               --------->MYB46(3) -------->ATHB1                           ------->TEIL                               --------->DEAR3(1) --------->YAB1                 ----------->GT1                              --------->ANAC58    <---------ICU4            --------->CCA1(2)     ---       --------->SPL7       <-----------GT1       --------->ATHB12     <-----------GT1 -------------- ----MYB52(2)  <----------DOF2--------->ANAC58   <---------ATHB12   <---------------AtSPL3<---------CCA1(2)   aacctctagtacgacttcttttggtttatatcacccaccacttcaatgtgaatcattgttttttttgttttttgtacgatatgatgttatatgtatctta  7710100                            ------>MYB83                            ------>MYB46(1)                 --------->SPL7               <XXXXXXXXXXXXXXXXXXXXMIR778               <---------SPL7               --------->ZAT14              --------->ALFIN1                            <-------TEIL             <---------------AtSPL3               <---------YAB1  --------->DAG2             <---------------AtSPL8              --------->AHL20(2)     <---------YAB1       <---------MYB59        <---------AHL20(2)----------->GT1   ----------->GT1     <-----------GT1    <---------AHL20(2)    ---------->DOF2 ------>YAB1 --------------->AtSPL8      --------->AHL20(2) ------->TEIL --------->MYB46(3) ->AtSPL8 <---------At5g28300          --------->GLK1(2)  <---------ABI4(2)                        <-   ttgtaatgtgattacggtgtacgataaaccaaactattgagaatttaaaattttaatagatgcaccgaaaggttaacaaacaatcgattctataaacaaa  7710200  Previous    Next  AGI:  At3g21890.1    Description:  zinc finger (B-box type) family protein. similar to DNA binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G15248.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41663.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ67322.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926) Range:  from: 7709120    to: 7709740    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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