Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    -------->ATHB1                                                                  --------->ATHB51                                                                  --------->ATHB12                                                                  <---------ICU4                                                                 <---------YAB1                    --------->GLK1(2)                            --------->ICU4                 <---------ARR11(3)                              <---------ATHB51                 --------->ARR11(3)                            <---------------AGL15               --                 <---------AHL20(1)                            --------------->AGL15           ------                 --------->AHL20(1)                           <-----------------AGL3         <-------              --------->AHL20(2)           <---------MYB52(1) ------------>ATHB5      <-----------TGA1   catttcattcgattcaaaaaatattctgttcttagattgtaatctgtttttttttctgtaatctcccattattgggttttgaatttctcgtcattttacg  7706400                                                                                                   --          <---------ARR14(2)              <---------ANAC58                                     ------     ----------->GT1                <---------YAB1                                             <----- <---------TOE2(3)                  --------->ICU4                                             ------ --------->DAG2          ------>ZmHOX2a(2)<---------ANAC58     --------->At4g35610             ------ -------->DOF2           ====================================HOX2a_HOX2a                       ------ --->ANAC46     <---------MYB59<---------ETT(2)          --------->LBD16                       ------ ----GT1  --------->ARR14(2)   --------->ETT(2)       ------>ZmHOX2a(1)                        ------   aaaaaggttgtgaatcggcctaatcgatctcggtcgtcataagtgagtgcttcttcctccgtattagctctcaaaaacatttgtgtttctatttgaaacg  7706500          <---------CCA1(1)         --------->ARR11(3)      <---------TOE2(3)     <-----------GT1                                               --------->ANAC58  --------->AHL20(2) ---------->CBF                                                    --------->ANAC58  <---------AHL20(2) --->ANAC55(1)                                            <---------AtLEC2         <----------DOF2 ----ANAC55(2)                    <------------CBF        --------->YAB1    <-----------GT1 --->ANAC58                  <---------TOE2(3)          <---------YAB1  <---------ARR11(3)         <- --->ANAC55(2)            --------->AHL20(2)            --------->AtLEC2--------->AHL20(2)       <--- --->ANAC58        ------>ZmHOX2a(1)       --------->ANAC46       ------->TEIL     --------->TOE2(3)< ----->GT1<---------RVE1(1)<---------AHL20(2)         --------->YAB1    --------->AHL20(1)       ---- --->ANAC46    <-----------GT1  <---------AHL20(2)   <---------ATHB12  <---------CCA1(2)       <-----   taacaatttacgatatttttcctcacaaattaatgtaattgaaacacaaaaccctatcatgcatgatgcacccatatattaccatctttaattccaaaat  7706600                                                            <---------O2                                                            <---------ANAC58                                                            --------->O2                                                            --------->TGA1a                                                            <---------TGA1a                                                            <---------ANAC55(1)                                                            <---------ANAC58                                                            <---------ANAC46                                                            --------->ANAC55(2)                                                            <---------ANAC55(2)                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                                                      --------->ARR14(3)                                                      <---------ARR14(2)                                                      --------->ARR14(2)                                                      <-----------ARR10                                                      <---------ARR11(3)                           --                                                      --------->ARR11(3)                          <--                                                 --------->LBD16                                  ---                                                <---------ANAC46                                 <---                                                <---------ANAC58                             --------                                --------->WRKY18(1)   <---------ARR14(3)                     <------- --------YAB1        <---------ARR14(2)        <---------LBD16                               <------- ------ICU4          --------->ARR14(2)    <-----------RAV1(1)                    ------------>CBF<-- ---------ICU4       ------->TEIL  --------->AtLEC2  <------ZmHOX2a(1)      --------->YAB1  --------- ----->YAB1         <---------CCA1(2) ------->TEIL <---------TOE1(2)       <---------ATHB12 --------- ----ARR11(3) --------->ATHB12 <-----------HVH21<---------ANAC58     <-----------GT1   <---------ARR11(3)   catcattttccttccatgatttgtatctgaaatggtcatgcatctatgttgcgcaggatcttacgtgtgttttactaatcgtgaaacaatatcaacgtca  7706700 ------->GLK1(2) -------ARR14(2)                      <---------ICU4                                             <--- ------>ARR14(2)                   --------->YAB1                                               <---- ------At4g35610                   <---------ICU4                                             <------ ->TOE2(3)                      --------->WOX13(1)                                          --------- ----HVH21                 <-----------GT1                       ----------->HVH21    --------->ANAC58 ----TGA1     <---------DAG2  ------------>CBF                 --------->ALFIN1       --------->ANAC58 -------GLK1(2)    <----------DOF2<---------ATHB12     <----------ID1             --------->ANAC58 >ANAC46--------->ZAT14<---------TOE2(3)  ---------->ARF1  ---------->DOF2        --------->ANAC46 >bZIP60(2)   <----------DOF2--------->ANAC46----------------->AGL3 <---------YAB1--------->ANAC58   gattcttctctatacacttttctttaagtttacccaatcatcatgtctccaagtatggagccaaagtgtgaccattgtgcaacctcgcaagcattgattt  7706800                                                         --------->GLK1(2)                                              --------->ZAT18                                              <---------ZAT14         <---------ARR14(2)                   <---------ZAT18           --------->ANAC58    --------->GLK1(2)                         --------->ZAT14           --------->ANAC58   ------>ZmHOX2a(2)    --------->ARR14(2)                      --------->REM1(2)------>ZmHOX2a(1)  --------->ANAC58    <---------ARR14(2)                     --------->AtLEC2  =====================================HOX2a_HOX2a   <---------GLK1(1)                    <-------TEIL     --------->ARR14(2)     --------->ANAC58 ------At5g28300                     --------->DEAR3(1)  <---------ARR11(1)  --------->ARR14(2)<----- -------GT1                          <---------TGA1a     <---------ARR14(2)  <---------ARR14(2)------ ---WOX13(1)                         --------->TGA1a    <---------ARR14(1) <-------TEIL   <---------At4g35610 >ATHB12 --------->ARR14(2)    --------->TOE1(2) --------->ANAC46  ----------->HVH21 <----------DOF2   actgcaaatccgatttggctaaactatgcctaaactgcgacgtccatgtacactctgcgaatcctctgtctcacaggcacatacgctctttgatctgcga  7706900                            <----------DOF2                          --------->At4g35610                          <---------At4g35610                      --------->ARR14(2)                  --------->ANAC58                  --------->RAP2.3(2)                  --------->RRTF1(2)                  --------->ANAC58                  --------->ANAC46                  --------->RAP2.6(2)                 --------->RAP2.3(1)                                        --------->ANAC58                --------->ZAT2                                              --------->ANAC58                --------->At4g35610                                       ---------->DOF2   <---------ANAC58   <---------ARR14(2)                                --------->ANAC58   <---------ANAC58--------->LBD16        --------->HSFB2a(1)           --------->ANAC46 ----HSFB2a(2)  <---------ZAT2            <---------HSFB2a(1)           --------->ANAC58       <----- --->HSFB2a(2)  <---------At4g35610       ----------->GT1       --------->ATHB12             --------   gaaatgcttctcacagccagccgcaatccgctgtctcgacgagaaggtttcatactgccaaggatgtcattggcacgaaagcaactgttcggagttagga  7707000                                                                                                <----                                                                                                <----                                                                                            <--------                                                                                            <--------                                                         --------->GLK1(2)                ------>NtERF2                                                   <-----------GT1                      <---------LBD16     --------->ZAT14                          <---------GLK1(2)                     <-----------HVH21     <---------ZAT14         <--------P       <---------ARR11(3)                   ------>ZmHOX2a(1) -ZmHOX2a(1)        <----------DOF2------>ZmHOX2a(1)    <---------GLK1(2)        ----------->RAV1(2) ->MYB59            ------>ZmHOX2a(1)    ------>ZmHOX2a(1)                   ------->TEIL --------->LBD16   cacagagttcagagcttgaatcctttctctggttgtccttctcctacagattttaacagaatgtggtcttcaattcttgaacctcctgtctccggcttgc  7707100           <------MYB46(1)           <------MYB83           <---------MYB46(3)           <---------DEAR3(2)          <---------TOE2(2)          <---------TOE1(2)       --------->MYB52(2)       <---------MYB46(3)       --------->MYB55(2)                                                       --------->TOE2(3)      --------->SPL7                                                        --------->ANAC46     <---------MYB52(1)                                                   --------->ANAC46 -----ANAC58                  <---------ARR11(3)                          --------->ANAC58     <----- -----ANAC58    <----------DOF2 ------>ZmHOX2a(2)                         --------->ANAC58  --------- -ANAC58 <---------MYB52(1)   --------->ARR11(3)                      --------->SPL7    --------->ZAT6 -ANAC58<-------GAMYB      <---------WOX13(1)               --------->KAN4(2)----------->RAV1(1)   ttagtccgttcgttggttcttttcccttgaatgatctcaacaataccatgttcgataccgcttattccatggtaccacacaacatcagttacactcagaa  7707200                                             --------->AHL20(2)                                            <---------YAB1                                          -------->HAHB4                                          <---------ICU4                                          <--------ATHB1                                         <---------YAB1                                    ----------->GT1                                   <---------TOE2(3)                          --------->ANAC58--------->ATHB51                          --------->ANAC46<--------HAHB4                          --------->ANAC58--------->YAB1               <----------DOF2--------->GLK1(2)    ----------->GT1------>ZmHOX2a(1)      --------->ICU4      --------->ANAC55(1)<---------AHL20(2)  --------->TOE2(3)    --------->YAB1       <---------LBD16 <---------ATHB51   --------->ALFIN1   <---------ZAT6  <----------DOF2 <---------TOE1(3)     --------->DAG2  --------->ARR11(3) ----GLK1(2) ---------->ID1  <---------GLK1(2)---------->DOF2    <---------ANAC46 >YAB1<---------YAB1     --------->LBD16 --------->ICU4 ---------->DOF2  <---------ARR11(3)    <-----   tttcagtgataatttgtctttcttttccacggaatctaaggtaataattaaaggagtgaaaagtgttccttataagttcttgatgaaaaatacagttctt  7707300  Previous    Next  AGI:  At3g21880.1    Description:  zinc finger (B-box type) family protein. Identical to Putative zinc finger protein CONSTANS-LIKE 12 (COL12) [Arabidopsis Thaliana] (GB:Q9LJ44); similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT4G15250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24166.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 7706755    to: 7708100    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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