Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <-------TEIL           <---------ICU4                                                      <---------YAB1             --------->ATHB12                                                      <---------TOE2(3)         --------->ICU4                                                    --------->YAB1   ------>ZmHOX2a(2)              <        <---------AHL20(2)    ------->TEIL       --------->WOX13(1)--------->ARR11(3)               <      <---------AHL20(2)     <---------CCA1(2) <---------ATHB12  <---------YAB1 <---------YAB1     <-     --------->AHL20(2)--------->AHL20(2)    --------->WOX13(1)--------->YAB1 --------->YAB1       -- ------>ZmHOX2a(1)  --------->CCA1(2)    ----------->GT1 --------->CCA1(2)   <-------TEIL          <- ------->ID1 <---------MYB46(3)  <----------DOF2--------->AHL20(2) <---------ARR11(3)              --   gtcctcattttatattggttagatataaaatgtatctttcattttgttaatcaattaagatacaactatgatctatagtttcatgattagtctaatttca  7704400                                           <-----------ARR10                                           --------->ARR11(3)                                           <---------ARR14(2)                                           --------->ARR14(2)                                  --------->TGA2(2)                                 <-----------TGA1                   ----------->HVH21                                 <-----------HVH21                  ----------->TGA1                                --------->ANAC58                  ===================================                                --------->ANAC46         --------->YAB1                                --------->O2 <---------ANAC58     ===================================                                <---------O2 <---------ANAC58     <---------TGA1a               --------->ANAC58 --------->ANAC55(2)      <---------ICU4<---------bZIP60(2)               --------->ANAC58 --------->bZIP60(2)     --------->ICU4<-----------------------TaNAC69(2)  <---------YAB1                --------->TGA1a         <---------ATHB12 ---------CCA1(1)               --------->ANAC55(1)   --------->WOX13(1)   <------ZmHOX2a(1) ---------RVE1(1)              <-----------STF1     <------NtERF2 --------->TGA1a --------ARR11(3)     <---------ANAC58     <---------ARR11(3)     --------->O2 ------->ARR11(3)     <---------ANAC58    <---------CCA1(2)       <---------O2 --------AHL20(1)=========================bZIP_DOF  <---------At4g35610<---------ANAC46             - ------->AHL20(1)---------->DOF2--------->ANAC58    --------->At4g35610<---------O2  ------->TEIL   -   agatattatagaaattcaagaaaggcttacttacacgtcatctagtatcttggcagcaatcatgacacaagtgacgaggagtctatgaacattcaaggag  7704500                                                        ------->GAMYB                                                       --------->ANAC46                                                       --------->ANAC58         --------->ZAT14                                                       --------->ANAC58         <---------ZAT14                            --------->MYB52(1)      --------->MYB46(3)        --------------->AtSPL8             <------ZmHOX2a(1)                    ------>MYB83                <---------------AtSPL8          <-----------RAV1(2)                     ------>MYB46(1)            <---------ANAC46   ---------->DOF2          -------->P          --------->MYB46(3)      --------->REM1(1) --------->ARR14(2)  ------->GAMYB             ------>MYB83        <---------MYB59   --------->LBD16         <---------ARR14(2) --------->MYB46(3)         ------>MYB46(1)    --------->ANAC58   ------>NtERF2 <---------ZAT18 =============bZIP_DOF     --------->MYB52(1)  --------->ANAC58  <---------ANAC46         <---------- =========MYC_MYB         --------->DEAR3(1)   --------->ANAC46  <---------ANAC58         --------->ARR11(3) -------->ANAC58 <---------ANAC58          --------->ANAC46      <---------ANAC58 ------->TEIL------>ZmHOX2a(1) -------->ANAC58 <---------ANAC58   --------------->AtSPL8      <---------LBD16 --------->ZAT18   acaaccaaagaaccaggatgcttatgagccaaccggtctatgtacacatacccaacaacgaaacatgccgggctacattttgtgtacttatatatcctct  7704600                                      ----------->HVH21                                    <---------ANAC46                                    ----------->GT1                                 --------->ANAC58                                 --------->ANAC58                              ----------------------->TaNAC69(2)                              ----------->HVH21                             <-----------HVH21                                       --------->MYB46(3)                            <----------DOF2                                     --------->At4g35610                          <---------ZAT18            <-----------ARR10          <---------At4g35610                          --------->ABI4(2)    ------>NtERF2        <---------MYB52(1)                          ------>NtERF2    --------->ANAC58         --------------------->WRI1                        <------NtERF2--------->LBD16 <---------ARR11(3)     <---------ANAC58   <-----                      <---------DEAR3(1)   --------->ANAC58    <---------ARR14(2)   -------->P <----- <---------ARR11(3)   ---------->CDC5--------->At5g28300       --------->ARR14(2)  --------->MYB52(1) -GT1             <---------YAB1 --------->ANAC46    --------->ARR11(3)     <---------ANAC58   <-----   caaggtatttagctatacttatgctcggcgctctcacgccgtgaaacgcctccaagctcttcccaaatcccttagtttgcttagctaaccactcgtttcg  7704700                                                                             --------->TGA1a                                                                             --------->MYB46(3)                                                                             --------->ANAC46                                                                  --------->ARR14(2)                                                                  --------->GLK1(2)                                                                 --------->ARR14(2)                                                                 <---------GLK1(2)                                                              <-----------------AGL1                                                           <---------MYB52(1)----------->HVH21                                                          <---------At4g35610--------->ANAC58                                                          =============================MYC_MYB                                                          <-------GAMYB --------->PCF2                                                         <---------ANAC58    ========================                                                    <---------At4g35610 --------->PCF5                                                  <---------RAP2.6(2)   <---------TCP15(1)                                                <---------MYB46(3)<---------ARR14(2)      <---------GLK1(2)                        --------->ALFIN1  <---------ARR14(2)   ------->PIF5                              <---------ANAC58 ----------------->AGL1<---------ARR14(2)   <-------PIF5                     <---------ALFIN1--------->At4g35610 <---------TCP20 ----ANAC58                        --------->At4g35610   <-----------RAV1(1) --------->ANAC58 ----ANAC58               <---------YAB1     <---------ANAC58 <-----------------AGL2--------->ARR14(2) ----ANAC46  <-----------HVH21     <---------At4g35610   <---------ANAC58  <---------ALFIN1         <   tgccacgagcttctccatcacatgggagattatagtcagcactcttggagtggctgcttccgttgccgattctggtcccacgaccgggtccagttcatcg  7704800                                                                                                   --                                                                                                   --                                                                                                  <--         <-------GAMYB                                                                      =========         --------->At5g28300                                                                <-------GAMYB        <---------MYB46(3)                                                                 <------MYB46(1)       <---------ANAC46                                                                    <---------MYB46(3)      <---------At4g35610                                                                  --------->MYB55(2)      <------NtERF2                                                                        <------MYB83     <---------ERF1                                                                       <---------AtMYB61    <---------DEAR3(1)                                                                  <---------ANAC46   <---------ZAT2                                                                       <---------ANAC58   --------->ZAT2                                                                       <---------ANAC58   <---------At4g35610                                                       <---------ANAC46     ---   ----------->RAV1(2)                                                       <---------ANAC58     ---  <---------ATERF1(1)                                                        <---------ANAC58   -----  --------->LBD16                   *TSS          <---------ANAC46     <---------ARR14(2) --------->ALFIN1  ------>NtERF2                     --------->DOF5.7(2)               <-----------TBP  <---------MYB46(3) ================MYC_MYB            <---------MYB52(1)            <---------ANAC46     --------->MYB55(2) ---------LBD16                    --------->TOE2(3)            <---------ANAC46    <------------CBF<   tctccggctgcggttaacatgggttctcttcagttttcgttaatgggccatgttgtatagttcgttttgggtatatatggcttgtagattgggtggttga  7704900                                                                                        --------->HSFB2a(2)                                                                                        <---------HSFB2a(2)                                                                                    <---------O2                                                                                    --------->O2                      --------->ALFIN1                                          <-----------HVH21                    <---------bZIP60(2)                                       -------->ABF1                    <---------ANAC46                                          ------->MYC3                    <---------ANAC58                                          <-------MYC3                    <---------ANAC55(1)                                       ------->MYC4                    --------->TGA1a                                           <-------MYC4                    <---------ANAC55(2)                                       ------->MYC2       --------->At4g35610                                                    <-------MYC2 ------->ARR14(1)   --------->O2             ----------->HVH21               --------->TGA1a ------->CCA1(2)    <---------O2           <---------At4g35610               --------->ANAC55(2) -------ARR14(2)    <---------ANAC58     <---------ANAC46                    <--------ABF1 =============================MYC_MYB    <---------ANAC58                    <---------TGA1a ------>ARR11(1)    --------->ANAC55(2)  <---------ANAC58                    <---------ANAC55(2) ------>ARR14(2)    <---------TGA1a <---------YAB1                      ----------->HVH21           < ------>ARR10 --------->ARR11(3)  --------->YAB1           <---------ZAT6    --------->O2        ---- -------TEIL  <---------ARR11(3) <---------YAB1            --------->ALFIN1  <---------O2       <----   gatacgatgagcttaagatgttacgtggggatgttatcatgtttcgtctgactttggacgagtgtgagatggttttgacacgtgtcacttcgcgagaaga  7705000           <---------YAB1        <---------ATHB12      <---------At4g35610 <---------GLK1(1)                                                                                  < --------->ARR14(2)                                                       --------->ANAC46          < <---------ARR14(2)                        <---------YAB1            <-----------GT1                - ------ZmHOX2a(1)               --------->AHL20(2)             <---------DAG2                      <- ----->CCA1(2)                  --------->YAB1                 <----------DOF2                     -- -----ARR14(2)                 <---------ATHB12             <-----------GT1      <-----------GT1 ----   taggattccgatgatttttgtataccttgagcaatgaaattagttatcatttatcaaacaaataactttattttccacttaattttctgcatattactag  7705100                        <---------ARR14(2)       ----------->GT1   <-----------GT1      --------->ARR14(2)       --------->LBD16 ---------ICU4        --------->LBD16          --------->SPL7                  <---------ZAT18 --------HAHB4       <---------ANAC58          <---------LBD16                 --------->ZAT14 -------->ATHB51     <---------ANAC58        <---------SPL7                    <---------ZAT14 --------YAB1       <---------LBD16     <-----------GT1                    --------->ZAT6 ------->ICU4     <---------ARR14(2)<---------ICU4                ---------->DOF2        <-----------GT1 ----->YAB1    <---------TOE2(3)    --------->ATHB51         <----------DOF2 --------->ZAT14      ---   cattattacccaaaattaagtttccgggtcttggtccataattttctcgtccggtacaatttcctttgaaaagtctcacagtacacaaattttactacat  7705200                                             <---------TOE2(3)                                           <---------AHL20(2)                                          --------->AHL20(2)       --------->AHL20(1)                 <---------AHL20(2)       <---------AHL20(1) --------------->AGL15       <---------ARR11(3) <---------------AGL15                                       <-----------HVH21       <---------AHL20(2)----------------->AGL2                                    <---------ANAC58       --------->AHL20(2)<-----------------AGL3       <-------TEIL          --------->ANAC55(2)       --------->ARR11(3)----------------->AGL3   --------->MYB59  ---------->DOF2 <---------ANAC58 ------>ANAC46   ----------->GT1    ----------->GT1  --------->CCA1(2)   <---------SPL7         <----   acgctggaatatattcttgatgtaaatactatatatagatgtaaattaatgttagatacattatttgaaaaaaggcatacgcgttgccggtcactgcata  7705300  Previous    Next  AGI:  At3g21870.1    Description:  CYCP2;1 (cyclin p2;1); cyclin-dependent protein kinase. Identical to Cyclin-U1-1 (CYCU1-1) [Arabidopsis Thaliana] (GB:Q9LJ45); similar to CYCP4,1 (cyclin p4,1), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT2G44740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24164.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related 2 (InterPro:IPR013922); contains InterPro domain Cyclin-like (InterPro:IPR011028); contains InterPro domain Negative regulatory factor PREG (InterPro:IPR012389) Range:  from: 7703873    to: 7704836    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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