Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->ALFIN1                                                                                    =================                                                                                    <-----------RAV1(2)                                                                                    <---------LBD16                                                                                 --------->At4g35610                                                                                 <---------At4g35610                                                                             <---------ARR14(2)                                                                             <---------ARR11(1)                                                                             --------->GLK1(2)                                                                             ------->TEIL <---------ZAT6                                                                             <-----------ARR10                                                        <---------YAB1       --------->ARR14(2)                                                   <---------ICU4           <---------CCA1(2)       -                                           ----------->GT1                  <---------ARR14(1)   <---                                         <---------At4g35610             <---------HSFB2a(2)   <-----        --------->AHL20(2)             <-----------RAV1(2)           <---------ARR14(2)   <---------- -------->DOF2         ------->TEIL   ------>ZmHOX2a(1)--------->TOE2(3) --------->HSFB2a(2)   <----- ----->YAB1  <-----------GT1 <---------At4g35610  <---------ATHB12   --------->ARR14(2)<------ZmHOX2a(1)   caaaagcccatttattctccctacgaatcgctgcttcttcctcaggtgttaaatcattctcaatgttgaagaattcgcgaatctgctcaggagtgttgcc  7697200               <---------MYB46(3)          --------->LBD16        <---------LBD16     <---------GLK1(1)  --------->ANAC58   <---------ICU4       --------->ANAC58   --------->ATHB12   <---------ANAC58  <---------YAB1 <---------MYB52(1)                                                         <-------- =RAV--------->GLK1(1)<---------ANAC58               --------->ANAC55(2)            ------>ZmHOX2a(2) -------->YAB1 <---------DEAR3(2)             <---------TOE2(3) ------>NtERF2      <------ZmHOX2a(2) -------DOF2------>NtERF2                <----------DOF2       --------->DEAR3(1) <---------ARR11(3) ----ANAC58 ------------>AtMYB77   ---------->DOF2  <---------TOE2(3)             --------->ARR11(3) -RAV1(1)--------->ANAC46      <------ZmHOX2a(2)    --------->MYB59           ---------->DOF2   <---- ----ANAC58----------->HVH21  <---------ARR11(3)    <---------TOE1(3)       <------ZmHOX2a(2)------->TEIL   tttgatgatttccgcgacggtttggcatgctagatcaaaaaggcttttgatgtttaggtaattcgcagccttgatgagatcaaagatcgtggatgtatct  7697300                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                    <---------ANAC46                                                               --------->ALFIN1                                             --------->ICU4  --------->TGA1a                                            --------->ANAC58 <---------TGA1a                       --                                            --------->ANAC58 <---------bZIP60(2)                   --                                       <------NtERF2         <---------O2                          <-                                     <---------DEAR3(1)      --------->O2  --------------->AtSPL3 <--       ------->TEIL           <------ZmHOX2a(2)              <---------ANAC46                   -----  <---------AtLEC2<---------ALFIN1 <-----------HVH21     <------NtERF2<-----------RAV1(1)       ----- -CCA1(2)      --------->PCF2--------->ARR11(3)       <------NtERF2<---------MYB46(3)<------ZmHOX2a(2) ------DOF2    ---------->ID1<---------ARR11(3)    --------->At4g35610<---------MYB46(3) --------->AtMYB61   ttttccatgaactccttgtcccacttcttgagatcatcgtcggagcaaggattagcggcatcgacgtggtgcttgttgcagtactcgatcaccatcgcaa  7697400                                             <--------HAHB4            --------->O2                     --------->YAB1            <---------TGA1a                  <---------ICU4            <---------O2            --------------->AtSPL3         ----------->HVH21          --------------->AtSPL8                               ------>NtERF2        <-----------HVH21     --------------->AGL15                                    <---------RAP2.6(2)     <---------ANAC58         <---------------AGL15                                   --------->SPL7     <---------ANAC58        ----------------->AGL2                                  --------->ALFIN1 ------->ARR11(3)            ----------------->AGL1                                  <---------ATERF1(1) ------->GLK1(2)             <-----------------AGL2                                 <---------SPL7 ----------ARR10             ----------------->AGL3                                <---------ANAC58 -------GLK1(2)           --------->GLK1(1) <---------ATHB12       --------->YAB1  <---------ANAC46 ---->ANAC58--------->TGA1a  <-----------------AGL1               <---------YAB1   <---------ANAC58 ---->ANAC58<---------ANAC55(2)  --------->ATHB51      --------->YAB1  --------->GLK1(2)<---------PCF2   gaatcttgcctgtcacgtttggaagagggattccattatcggtacaatcattttcactcatatgagctatgataatctggcattggcgtgcggcctcttc  7697500                                                                                   --------->HSFB2a(2)                                                                          <---------CCA1(1)                         --------->ARR11(3)                               <---------RVE1(1)                         <---------ARR11(3)          --------->ICU4      <---------ARR11(3)                        <---------At4g35610      <---------DDF1     <---------ANAC46                        --------->GLK1(1)       <---------ETT(2)  <---------MYB46(3)                        <---------GLK1(1)       --------->ETT(2) --------->ALFIN1  <---------HSFB2a(2)                  --------->MYB52(1)   ------>ZmHOX2a(2)  <---------AHL20(2)      <---------LBD16             ----------->HVH21       --------->ARR11(3) <---------YAB1 ----------->ARR10 <-----------          --------->ATHB12           <---------ARR11(3)<---------AHL20(1)--------->ARR11(3)      <---   ttcgacctcgaatgagtgaccatcggagctcttcaatatgatcttcttcgtcgacattattttttcagtgggggagattttttctctggaagattgaaga  7697600                    --------->DAG2                    --------->MYB59                    <---------TOE2(3)                                                            ----                    <---------TOE1(3)                                                        <-------          <---------WOX13(1)                                                              <---------ANAC58         <------------CBF                                                                 <---------ANAC58        --------->ATHB12                                <---------AHL20(2)                <---------ANAC46        -------->HAHB4                                  --------->YAB1              ------->TEIL ----       --------->ICU4                         <---------MYB52(1)                   <---------AtLEC2       <---------ATHB12                     <---------ANAC58                  <---------ARR14(2) <--- -CBF  <---------YAB1----------->GT1        <---------ANAC58                  --------->ARR14(2) ---- ---------CBF----------->GT1         ------->TEIL     <-----------TBP   <----------DOF2 ------->TEIL   attgagtaaatgattgagtaataaggtaatgaagttatgaacctatgcgtttgtctatttataagccctaataactttcatatatgcatgtatcgtgtca  7697700        ---------->DOF2      --------->ANAC58      <---------ANAC55(2)      --------->ANAC46      --------->ANAC58 ----->ANAC58                                               ---------->DOF2 ----HVH21                                                  --------->ZAT14 ----->ANAC58                                           --------->ZAT6                        ------- ------ANAC55(2)                             <-----------RAV1(1)                <----------DOF2     < ----->ANAC55(2)       <------------CBF     <---------TOE2(3)     <----------DOF2   <---------YAB1  <   agtaagtcacgaaagcttgaagttgtattgtatgtctactcatgttgatgttgttcttccactaaagtctttttttatgtgtctttttgattaaaaccac  7697800                                                                                         --------->YAB1                                                                                         <--------HAHB4                                                                                         <---------ICU4                                                                                         -------->ATHB1                                                                                         --------->ATHB12                                                                          --------->ANAC58                                                                          --------->ANAC55(2)                                                                          <---------ANAC55(2)                                                                          --------->ANAC58    <------                                                                   <---------ANAC58     <---------ATHB12                                             --------->YAB1        <---------ANAC58     --------->ICU4 -->AtMYB61    <---------ANAC46           <----------DOF2          <---------ANAC46--------->ANAC58 ---------DAG2 <---------ANAC58  --------->ANAC58   <-------TEIL ------->TEIL      --------->ANAC58 ----------DOF2<---------ANAC58  --------->ANAC58  --------->CCA1(2)  <-----------HVH21 <---------YAB1   aactttttcatgtgtttacttgtaagttagtatgtaagccctaactttcatagatacatgtatgatgtatcgtgtcaagtaagtcacacaatcattaagt  7697900                                     <---------YAB1                                   <---------AHL20(2)                                   --------->AHL20(2)          <-----------GT1                                  <---------AHL20(2)          <---------YAB1                                  <---------AHL20(1)        --------->YAB1                     <-----                             --------->ANAC46           <---------AHL20(2)                     <-----                           --------->ZAT6               --------->AHL20(2)                     <-----                    <---------AHL20(2)                 --------->AHL20(2)  <----------DOF2    <------ ---TOE2(3) <-----------RAV1(1)   --------->AHL20(2)<----------DOF2 --------->REM1(1)      <---------GLK1(1)   tatctactcatgttatgttgttttaatttccactaaattattttttatatgtgtcttttaaattataactacaacttctttttttttttttggaaattcg  7698000   <---------At5g28300  <-----------GT1 ----ANAC58                     --------->ICU4                    <-----------GT1 ----ANAC58                  <---------AHL20(2)        <---------ZAT14        <---------DAG2 <------- ----ANAC46       <---------TOE1(2)                    --------->ZAT14        <----------DOF2-------- -TEIL           ------>ZmHOX2a(1) <----------DOF2     <---------ZAT18     <-----------GT1---------->DOF2   tgttttacagtgtttactcctaagtttctatgtaattctttttttttttttatctactggactccatttttccaaataaactttttcatcaaaaatgcac  7698100  Previous    Next  AGI:  At3g21850.1    Description:  ASK9 (ARABIDOPSIS SKP1-LIKE 9); ubiquitin-protein ligase. similar to ASK10 (ARABIDOPSIS SKP1-LIKE 10), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT3G21860.1); similar to kinetochore protein [Brassica juncea] (GB:BAB85607.1); contains InterPro domain SKP1 component, POZ; (InterPro:IPR016073); contains InterPro domain SKP1 component; (InterPro:IPR001232); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897); contains InterPro domain SKP1 component, dimerisation; (InterPro:IPR016072) Range:  from: 7697096    to: 7697557    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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