Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                ------>ZmHOX2a(2)                                                                            <-----------ARR10                                                                            --------->ARR14(3)                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                   <------NtERF2                                                                 <---------DEAR3(1)                                                                 --------->DEAR3(1)                                                                --------->RAP2.3(1)                                                                <------NtERF2<------ZmHOX2a(2)                                                                --------->ATERF1(1)                                                               <---------ATERF1(1)                              ----------->GT1                  ------>NtERF2<---------ARR14(3)                             <------NtERF2                     <---------RAP2.3(1)                            --------->LBD16                ----------->HVH21<---------ARR11(3)                          --------->LBD16              <---------ANAC58     --------->ARR11(3) <-----                          <---------At4g35610          <---------ANAC58    <------ZmHOX2a(1)   ------                  ------>ZmHOX2a(2)           -------------->OsCBT------>NtERF2            <---------AtMYB61         <---------ZAT18  --------->At4g35610 --------->ALFIN1--------->DEAR3(1)           --------->ALFIN1       --------->ANAC58   <---------LBD16   <---------ANAC58  <---------DEAR3(1)      --------->ANAC46       --------->ANAC58  <---------ANAC46   <---------ANAC58 --------->ATERF1(1) --------->ANAC46       --------->ANAC46 <---------LBD16     <---------ANAC46<---------ATERF1(1) ------>ZmHOX2a(1)   tagtttaccaaggcactcgatcgcattccgcggagaaaaattgaaggcgtgtgttttccgagcgacggcgacgaagaggatcctctccacgagatggtgg  7664000                   <---------ARR14(2)   <----------DOF2                  <---------CCA1(2)    <---------ANAC46                              <---------ARR11(3)      <---------ZAT18                  <---------ANAC58                              --------->ARR11(3)  <---------LBD16*TSS            <---------AHL20(2)                              ---------->DOF2   -- ----ZAT18     --------->LBD16  --------->AHL20(2)                           <-----------GT1    <---- --->ZAT18     --------->At5g28300     <---------ANAC58 ------------>CBF <----------DOF2<----------DOF2   actctctggggactcgccgtaaatctgaaacccattaaatggcttttattttgggccatacaatatgggcctatacttttaacaaaagagcttttctgct  7664100             <---------ANAC55(2)             --------->ANAC46             --------->ANAC55(1)                                      ----------->GT1             --------->ANAC58                                    --------->AHL20(2)             --------->ANAC55(2)                                 <---------AHL20(2)               <--    <---------WOX13(1)                                --------->TOE2(3)                           ---   <------------CBF                     --------->ANAC58         <---------ATHB51                 ---  --------->ATHB12          <---------DAG2<---------ARR11(3)  <---------AHL20(2)                 ---- <---------YAB1          <---------AHL20(2)           --------->TOE1(3)                       ------- --------->ICU4          <-----------GT1--------->ANAC58     --------->AHL20(2)            --------->YAB1 ------->YAB1--------->ANAC58           --------->ANAC46     <---------AHL20(2)         <----------DOF2 ------DOF2<-----------GT1  <----------DOF2          ----------->RAV1(2)    --------->GLK1(2) -------   ttgatgattgttttcacgtaatacaatttactttttggtttcaagaaattccataacctgaaattaaataattcgtataatctgtaacgtctttaataaa  7664200            <---------ARR14(2)            --------->ARR14(2)            --------->ARR11(3)           <---------CCA1(2)       <---------AHL20(2)       <-----------GT1 <----------DOF2                             <---------ANAC58 -------ARR11(3)                             <---------ANAC58                       <---------TOE2(3) ------>ARR11(3)                             <---------ANAC46            ------------>CBF  <---------AHL20(2) ------>GLK1(2)                        <---------AHL20(2)  --------->ANAC55(2)  --------->TOE2(3) ----->RVE1(1)            <----------DOF2 <---------WOX13(1)           --------->YAB1     <---------YAB1 -->AHL20(2)<---------ARR11(3)       --------->ANAC55(2) <---------AHL20(2)   --------->AHL20(2)  --- -->YAB1 --------->ANAC55(2)  <---------TOE2(3)          <-----------GT1--------->TOE2(3)--------->AHL20(2)   aatctttatttacatatcttgttttctgctttgatgtttatgtaattgcttaaaactatttacttattttgtatcatcaattcattaacatttttatttg  7664300                                                                                   --------->AHL20(1)                                                               ---------->DOF2     --------->AHL20(2)                                                              <---------AHL20(2)   <---------AHL20(1)                                                   --------->YAB1                 <---------AHL20(2)                                               <---------AHL20(2)             --------->AHL20(2)        -------->P                             --------->AHL20(2)             <---------AHL20(2)        --------->MYB52(1)                    --------->AHL20(1)         <---------YAB1        ------>MYB83      --------->ZAT6      --------->AHL20(2)      --------->ICU4             ----        ------>MYB46(1)   <-----------GT1     <---------AHL20(2)     <----------DOF2   <-----------GT1 --------->CBF     <------------CBF   <----------ID1*TSS    <---------YAB1--------->AHL20(2)  -------   ttcaatagcctacctgttttctattgtttcactaattaagagaacaaatttaataaaaacttattaaaagtctttattatttaaatattttacaattcat  7664400        <---------GLK1(2)                                <---------ZAT18        --------->TOE2(3)        --------->ARR11(1)                               --------->ZAT18        ----------->GT1  ---- ----->AHL20(2)                                --------->DAG2                  ----------->GT1  <---- -->YAB1--------->ARR14(2)                    ---------->DOF2    --------->MYB111(1)            -----   aaatttcatagatttgctaaattgttgtgatgagaaaatgggatactataaagtagtagtagactagtagttagtatagaaacgtttaaaaacatacaac  7664500                                                                     <---------YAB1                                                                  <------NtERF2                                                                  <---------MYB52(1)                                                                 ------>NtERF2                                                                 <---------RAP2.6(3)                                                                 <-----------TGA1                                                                 <-----------HVH21                                                                --------->RAP2.3(3)             <----------DOF2  <---------ALFIN1                  --------->DEAR3(1)         <---------CCA1(2)    --------->ANAC46                  --------->ANAC46       --------->YAB1       ----------->RAV1(1)                <------NtERF2  --------->ARR11(3)     <-----------GT1     --------->PCF2                        --------->ATERF1(1)    --------->YAB1      --------->ANAC58                       --------->RAP2.3(1)                  - <----------DOF2        --------->ANAC58                      <---------ATERF1(1)                   - --->GAMYB   <---------DAG2 <---------ALFIN1            ---------->DOF2---------->DOF2             -- -----MYB52(2)          <-----------TCP11(1) --------->DAG2   <---------RAP2.3(1)                 <-- ---->MYB46(3)     ----------->HVH21        ---------->DOF2  <---------DEAR3(1)                 -----   aaacttttatcatctctttttgtgacaggcccacactatcaattcgaaaagtctaaacaaaagtcgccgtcatgaaagtagaacttgtgttcataccatc  7664600            <---------CCA1(2)      --------->WRKY38(1)      --------->WRKY12                                          <---------ALFIN1     --------->ATERF1(1)                                     ------->GAMYB    <-------GAMYB --------->ANAC58                           --------->DEAR3(1)   <---------ANAC58        ------->GAMYB             --------->At4g35610   <---------DEAR3(1)   --------->MYB52(1)           <------NtERF2     <---------MYB52(1)   <---------MYB46(3)  --------->MYB46(3)           ------>NtERF2    --------->ANAC46   <---------ANAC58  ----------->RAV1(1)<---------GLK1(2)    --------->RAP2.6(2) ----->NtERF2--------->ARR14(2)        <---------HSFC1(2)   --------->MYB46(3) -------->LBD16   --------->ANAC46     --------->HSFC1(2)   <------------AtMYB77  <-----------TGA1 ------->DEAR3(1) --------->ANAC58    <-----------ARR10  --------->MYB46(3)       <-----------HVH21 -------LBD16<---------ARR14(2)<---------MYB52(1)  --------->ATERF1(2)<-----------HVH21 ---->DEAR3(1)   --------->LBD16    ---------->DOF2<---------ATERF1(2)<-----------TGA1   gccgggcgttggccatatccgagcaacaacggcgttagcaaagcttctcgttgccagcgacaaccgcctctccgtcactctcatcgtcattccttcacga  7664700                                                                  ------>NtERF2                                                             ====================HOX2a_HOX2a                                                             =================================HOX2a_HOX2a                                                             ------>ZmHOX2a(1)              ---------         <---------HSFC1(2)                                 <---------ALFIN1                <--------         --------->HSFB2a(1)                              ------>ZmHOX2a(1)                 ------->TEIL         --------->HSFC1(2)                               ====================================HOX2a_HOX2a      ------>NtERF2                                       =======================HOX2a_HOX2a<--------     ----------->HVH21         <---------GLK1(1) --------->LBD16 --------->DEAR3(1)      --------->TOE1(1)     --------->DEAR3(1)     --------->ANAC58     --------->At4g35610      <------ZmHOX2a(2)<---------ARR14(1)     --------->O2           --------->ANAC58     <---------At4g35610 --------->LBD16     <---------ANAC55(2)     <---------O2           --------->ANAC46    --------->ANAC46 --------->ANAC46        --------->ANAC55(2)   ------>NtERF2  ------>ZmHOX2a(1) --------->LBD16  --------->REM1(1)   <---------ARR11(3)<---------CCA1(2)  ----------->HVH21      <---------REM1(2)   --------->ARR14(2)  <---------ALFIN1      ------>ZmHOX2a(2)  --------->DEAR3(1)   <---------ETT(2)      <---------ARR14(2)<---------ALFIN1      --------->ARR11(3)   gtctccgacgacgcttcttcctccgtctacacgaactccgaagaccgtctccgctacatcctcctccccgcccgagatcaaactactgatctcgtatctt  7664800                               <---------ANAC58                               <---------TGA1a                               <---------ANAC58                               <---------ANAC46                               --------->TGA1a                               <---------O2                               --------->O2                              <------NtERF2                              <---------MYB52(1)                 <-------TEIL                             <---------RAP2.6(3)               ------->MYC3     <---------At4g35610                             <-----------HVH21                 <-------MYC2     --------->At4g35610                            --------->RAP2.3(2)    --------->ARR11(3)    <---------LBD16 --------->ETT(2)           --------->DEAR3(1)     <---------ARR11(3)   --------->MYB52(1) <---------ANAC46 >ARR14(2)         --------->ANAC58         --------->At4g35610------->MYC2     --------->ZAT2 -ARR11(1)         --------->ANAC46        <---------DEAR3(1)  <-------MYC3     <---------STY1(2) -ARR14(2)         --------->ANAC58      <-----------HVH21  <---------ALFIN1    <---------ZAT2   acatcgacagccagaaaccacaagtaagagccgtcgtgtccaaggtcgctggagatgtttcaacacgttcagactcacggctagctgggattgtcgtaga  7664900  Previous    Next  AGI:  At3g21740.1    Description:  APO4 (ACCUMULATION OF PHOTOSYSTEM ONE 4). Identical to APO protein 4, mitochondrial precursor (APO4) [Arabidopsis Thaliana] (GB:Q9LSZ0;GB:Q8GYN3); similar to APO2 (ACCUMULATION OF PHOTOSYSTEM ONE 2) [Arabidopsis thaliana] (TAIR:AT5G57930.2); similar to APO2 (ACCUMULATION OF PHOTOSYSTEM ONE 2) [Arabidopsis thaliana] (TAIR:AT5G57930.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24148.1); contains InterPro domain Protein of unknown function DUF794, plant (InterPro:IPR008512) Range:  from: 7662368    to: 7664017    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g21750.1    Description:  UDP-glucoronosyl/UDP-glucosyl transferase family protein. similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT3G21760.1); similar to gylcosyltransferase UGT71A13 [Maclura pomifera] (GB:ABL85473.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) Range:  from: 7664352    to: 7666202    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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