Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------ATHB12                                          <---------ALFIN1                      --------->GLK1(1)                                      --------->ZAT18   --------->ARR14(2)  <------NtERF2                                      <---------ZAT18   <---------GLK1(2)  --------->LBD16                                --------->DEAR3(1)      <---------ARR14(2)--------->DEAR3(1)    -----                              --------->LBD16       <---------At4g35610  <---------LBD16       <-----                              ------>NtERF2         --------->At4g35610 ------>NtERF2          <-----                             --------->ANAC46--------->DEAR3(1)         --------->LBD16        ------              -------->P     --------->DEAR3(1) <----------DOF2     <---------ARR14(2)  --------->ARR11(1) ------->At4g35610          <---------LBD16  <---------ALFIN1       --------->ARR14(2)  <---------ARR14(2)   cagcacaatttggactaacctattctcttctccgccgtagtgctccaccgcttcatcggaatcgcttccagttccgccggagaaatcatcgatacggaca  7626300            <---------RAP2.3(2)            <---------RAP2.6(2)            <---------DEAR3(1)                           <-----------GT1            <---------RAP2.3(3)                     ------->MYC3                                    -           --------->RAP2.6(3)                      <-------MYC2                            <--------          <---------WRKY18(1)                       ------->MYC2                       ------->GAMYB<         --------->WRKY12                           <-------MYC3                      <------------AtMYB77         ----------->HVH21                   <---------At4g35610        <---------MYB46(3)------>NtERF2       <----------DOF2                       --------->At4g35610       --------->ALFIN1--------->ANAC46     ------>NtERF2                           --------->ZAT2            <---------AtMYB61 ----------->HVH21    --------->DEAR3(1)                      <-----------RAV1(1)     <---------DEAR3(1)--------->MYB46(3) ---->KAN4(2)<---------RAP2.3(1)          --------->At4g35610  ------>NtERF2         <---------At5g28300 -----TaMYB80------>NtERF2  <---------HSFB2a(2)   ------->TEIL <---------ATERF1(1)  <---------ARR14(2) ----HSFB2a(1) <---------ANAC46           <---------At4g35610--------->RAP2.6(3)<------------AtMYB77- --->HSFB2a(1)<------NtERF2 --------->HSFB2a(2)  <---------ALFIN1 <---------ALFIN1  --------->ARR14(2)   ttcccagcgccttgacggcgtttattctgcctagaaaatggattagctgctgcacgttttaacgacggccacggtggtcgtaactgtaaccgcgacggag  7626400               --------->MYB46(3)       ---------->DOF2                                 --------->ARR14(2)    --------->LBD16                                    --------->ARR11(1)                <-------TEIL  <---------LBD16                                      <---------ARR14(2)        --------->LBD16 --------->MYB52(1)                                  <---------TOE2(2)          --------->DEAR3(1) -------->ARR14(2)                                   <---------TOE1(2)          <---------ANAC46 -ANAC46 ------------------------>ANAC81             ----------->ARR10       --------->ANAC46     <-- ---------ARR14(2)                                <---------ANAC46 ------->TEIL<---------LBD16    <-- -------->MYB52(1)        ---------->DOF2    <---------YAB1     <---------MYB52(2)<------NtERF2<-----   agtaaccggaagagccatcaaacgtagaaaaagatgaagtagggattttgattcgtagatttggaaacgaacttggattacgccggagaagttcgtcgtt  7626500                              --------->LBD16                              <---------ATERF1(1)                             <---------ANAC46                             <---------DEAR3(1)                            --------->At4g35610                            <---------LBD16                            <------NtERF2                            <---------At4g35610                            --------->ATERF1(1)                           <---------ATERF1(1)                           ------>NtERF2                           <---------ERF1                           <---------RAP2.3(1)                           <---------ORA47(2)                          <---------At1g77200                          <---------DEAR4(1)                          <---------DEAR3(1)                          <---------DREB2C(2)                          <---------RAP2.3(3)                         <------NtERF2                         --------->ATERF1(1)                        <-----------HVH21                        ------>NtERF2                        <---------ATERF1(1)                        <---------SPL7                       --------->DEAR3(1)                       <---------O2                       <---------DEAR3(1)                       --------->O2                       <---------ANAC46                      <------NtERF2                      --------->ATERF1(1)                      --------->RAP2.3(1)                      --------->RRTF1(1)                     ------>NtERF2                     <---------ATERF1(1)                     <---------RAP2.6(1)                     <---------ERF1                     <---------RRTF1(1)                     <---------ORA47(2)                     <---------RAP2.3(1)                    <---------DEAR3(1)                    <---------DREB2C(2)                    <---------RRTF1(2)                    <---------ATERF1(2)                    <---------RRTF1(3)                    <---------RAP2.3(3)                    --------->ATERF1(2)                    <---------RAP2.6(2)                      <XXXXXXXXXXXXXXXXXXXXMIR172E                    <---------RAP2.3(2)                      --------->At4g35610        <---------HSFB2a(1)<---------DEAR3(2)                <---------At4g35610--------->YAB1     -- -------TOE2(3)<---------ANAC46                      --------->ALFIN1    --------->GLK1(2)        --- -------TOE1(3)<---------ANAC58<------NtERF2    ---------->DOF2----------->RAV1(1)                <-- ----MYB52(1)  <---------ANAC58--------->ATERF1(1)--------->DAG2      <---------TOE2(3)       -------   agggtttggaacatttggcttggcggcgtcggcggagacttcgttcttagtaaaggtggaaacagcagcattgagattccattgatgagtttcaagaaaa  7626600                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                 --------->MYB52(1)              <---------ARR11(3)                                         ------>NtERF2                           <---------ARR14(2)                                       <---------LBD16                           --------->ARR11(3)             <---------HSFB2a(2)    --------->ATERF1(1)                          --------->ARR14(2)       --------->REM1(1)           <---------ATERF1(1)              <---------ANAC55(1) ------->CCA1(2)                 <---------MYB52(1)   <-------TEIL  --------->ANAC55(2) ------>ARR11(3)      --------->ARR11(3) --------->LBD16            <---------ANAC55(2) -------ARR11(3)      <---------ARR11(3)<---------DEAR3(1)          <---------ANAC58 --->DOF2    --------->HSFB2a(2)<-----------HVH21<---------DOF5.7(2)<---------ANAC58   gatatagctacttctctcgaacaagatgtttctccgtcgtctccggcgagttaacgtccatcgcaagattacgtttcttctccgatcttcttctctaaaa  7626700                                                             ---------->DOF2                                                          --------------->AGL15    ----------->GT1                                                     <---------ZAT6   <------ZmHOX2a(1)                              <----------ID1    <---------ANAC46     ----------->GT1                  --------->ARR14(2)         <---------MYB52(1)    <-----------RAV1(2)         <-----------GT1 ---------->DOF2  <------NtERF2--------->ARR11(3)          --------->YAB1   cctctgttttataacttcagtatcgactaaagagaacaaaacgcgtcgttttgtagagttcttgaaagagcaggagaaaaaactatagtaactaaatttt  7626800                                                                 <---------------------WRI1                                                               <---------ARR11(3)              --------->AHL20(2)                               --------->AHL20(1)                 ---  --------->GLK1(2)                                       ------------>CBF                        ---  <---------ARR11(3)                                     --------->ANAC58                 <---------ARR11(3)  --------->ARR11(3)       --------->ANAC46              --------->ANAC46                 --------->ARR11(3) --------->RVE1(1) ------------>CBF                      --------->ANAC58   ---------->DOF2     -----   taaaaatcttacaaaaaaaaatacaatccaaaccatatagtaatctttctatttcatacacacaatatactaaaaatacaaagacaaaatgaaatcttca  7626900                                                     <---------HSFB2a(1)                                                     --------->HSFB2a(1)                                                    <---------KAN4(2)                                                --------->ANAC58                                     <---------ARR14(2)                                     --------->ARR14(2)                                 <-----------TGA1     <-----------GT1              <---------------AGL15       <---------At4g35610       <-----------HVH21   <---------MYB52(2)            <-----------------AGL2       --------->At4g35610      --------->ANAC46 ------>ANAC58                   <-----------------AGL3   ------>ZmHOX2a(1)      <----------DOF2 ------>ANAC58               <<<<<<<<<TBF1      --------->ANAC58           <---------ZAT18 ----->DOF2              <-----------GT1        --------->ANAC46           --------->ZAT14   aagcaaataacaaaaccagaggttttttttcttcttctaaatctggtttcaaggaatgtccttaagctcaaattcagagctctctttcttcgtcacttcc  7627000                  <-----------HVH21             <---------ICU4             --------->YAB1            <---------YAB1                  <----------DOF2          --------->YAB1        --------->YAB1          <---------ICU4  ----------->RAV1(1)                             --------->YAB1     <---------ATHB12    --------->MYB46(3) <---------DAG2 <---------AtLEC2    --------->ANAC46--------->YAB1        --------->At4g35610       --------->YAB1                  - <---------ZAT14 --------->WOX13(1)--------->YAB1    <---------TOE2(3)    --------->AHL20(2)        -   ttctccactgaatcatcatcagtcacaacaacagtaatcacatcagctttatactgatgtttcatggcaaacacaataaaaatcaagaagttcaatgctc  7627100              --------------->AGL15         <---------MYB52(2)        --------->ANAC58        --------->ANAC55(2)                                                                        --        <---------ANAC55(2)                                                                    ------        --------->ANAC46                                --------->ANAC58                       ------        --------->ANAC58                                --------->ANAC46              --------->ANAC58        --------->ANAC55(1)                  ----------->GT1   <----------DOF2        --------->ANAC58   <----------ID1                           <---------TOE1(3)<---------At4g35610    --------->MYB46(3) -------->ANAC58                            <---------TOE2(3)<---------ZAT2     <---------ATHB12   -- -------->ANAC58                     <----------DOF2    --------->ANAC58   --------->ZAT6      ------   ccaagacaacaagtaaccagtagaagtagttcaatctcgctttgttaaggttacttctaagccagcttttgtctgtaaccctatcaacaagcgaaacaag  7627200  Previous    Next  AGI:  At3g21660.1    Description:  UBX domain-containing protein. similar to UBX domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G15410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24048.1); contains InterPro domain UBX (InterPro:IPR001012); contains InterPro domain SEP (InterPro:IPR012989) Range:  from: 7624502    to: 7626661    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g21670.1    Description:  nitrate transporter (NTP3). similar to nitrate transporter (NTP2) [Arabidopsis thaliana] (TAIR:AT2G26690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24051.1); contains InterPro domain TGF-beta receptor, type I/II extracellular region; (InterPro:IPR000109); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 7626764    to: 7629158    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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