Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <-------MYC3                                                              -------->P                                                           <---------ANAC58                                                         <---------AHL20(2)        --------->ARR11(3)                        --------->YAB1   ------->MYC3       --------->YAB1                     <---------AHL20(2) <-----------GT1                        <  <---------ATHB12                       --------->AHL20(2)<---------ANAC58                  <-------TEIL -------->WOX13(1)                    ----------->GT1    <-----------GT1               --------->LBD16   tccaatcaaacatattgaagtcatatatatgtattcagagagattaaatctatgaaaatttacttaccatgtgtttgagtttgatgctccagagattcat  7621100                 --------->TOE2(2)                ----------->RAV1(2)               -------->P                                      <----------DOF2                ------>MYB83            <---------ATHB12                          --------->DAG2                        <-------- --------->ATHB51--------->TOE1(2)            --------->WOX13(1)                 --------->AHL20(2) <---------ICU4------->TEIL   <---------AHL20(2) ----------------->AGL3       --------->ATHB12------>MYB46(1) ---------MYB52(1)           --------->YAB1<-----------HVH21------->TEIL     --------->ICU4 ---------   ccattatttcccaaatcaacctgggtctgaataaaaatgtgcaagtgtcaatccaaaaattgaatctttaagtgttgaattgattaaacatcgaccaaat  7621200                                                                                                 ----   --------->ANAC58                             <---------ZAT2                                   <---   --------->ANAC58                             <---------At4g35610                              <--- -MYB59         --------->YAB1                  --------->At4g35610                             <---- >AtMYB61  <-------TEIL     ---------->DOF2 <-----------HVH21                                   <----   cagacaagtaagattcaatgacaaaaacccaaaagaacatagtcgaagtcagctacttgaaccatttcatttcaaaacaaaatcaagtctcgtcgtcaat  7621300                                                   --------->MYB52(1)                           <----         <----------ID1                           --------->TOE1(2)                           <------ ----->YAB1                                   --------->ZAT18                              <---------DEAR3(1) -----ATHB1                                   --------->ZAT14                             <------NtERF2 ------ICU4                                   <---------ZAT14                   ----------->HVH21 -----ATHB51     --------->DAG2               <---------ZAT18                 <---------ZAT6 <------NtERF2 -----ATHB12    ---------->DOF2         <------ZmHOX2a(1)         --------->At4g35610   <---------DEAR3(1)   aatagcagaaaacgaagaaaaagtttgtcaatttagagaagaggagagtgaacttacgaagtatgagaagctcaagagtagtgtgactcgtcgtcgtcgt  7621400                                 --------->AHL20(2)                              ----------->GT1                                       *TSS           <-                     ------>ZmHOX2a(2)        <---------YAB1         <---------HSFB2a(1)         <---                     --------->ETT(2)     <---------GLK1(2)          <---------HSFC1(2)     --------- --NtERF2          --------->ARR14(2)     <---------ARR14(2)         --------->HSFC1(2) <-----------GT1 ---DEAR3(1)       <---------ARR14(2)     --------->ARR11(3) ---------->DOF2 <----------DOF2<--------   cgaagtcactcacgaagactggatcgaccgagagataaatttcagattttgattctgaaaatataaagagacccttcgacttttcagttttcacttcaga  7621500                                                                                                    -                                                                                                   <-                                                                                                   --           --------->MYB52(1)        <---------YAB1                                                <-         <---------MYB46(2)         <---------AHL20(2)                                         <-----         --------->MYB46(3)         --------->AHL20(2)                                     --------->AHL20(2)     --------->DOF5.7(2)            <---------AHL20(1)                                     <---------AHL20(2)     <---------MYB52(1)            --------->YAB1                                         --------->AHL20(2) <---------At4g35610              <---------YAB1                                          <---------AHL20(2) --------->At4g35610    <---------At5g28300        --------->YAB1------------>CBF     <---------YAB1< ----------RAV1(2)     <-----------GT1             --------->AHL20(2)                <---------AHL20(2) --------HVH21         --------->MYB52(1)        --------->AHL20(2)                 --------->YAB1 -- >ZAT14  <---------MYB52(2) <---------ANAC46    --------->YAB1  --------->TOE2(3)  <---------YAB1---- -ZAT14<---------DOF5.7(2)------->GAMYB    ----------->GT1   <---------GLK1(2)---------->DOF2  ------   gtcagccgttaactaacgagagttttaacggcgtttattataattcagtaaaataatatcaaatattctcaatttgacccaaaagattataatttaaaaa  7621600   --------->YAB1   --------->AHL20(2)  <---------YAB1 -------->YAB1 --------AHL20(2) ------->AHL20(2) --------ATHB51                                                         ------>MYB83 ----AHL20(2)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---------ICU4                                                        --------->TOE2(2) ------->ICU4                                                         --------->TOE1(2)        <----- ----->YAB1                                                 <-------TEIL------>MYB46(1)        ------ --->AHL20(2)<---------CCA1(2)    --------->YAB1        <---------------AtSPL8  --------->ZAT18<-----   aataattatacagtcgtctctcaagaaccatttctatagtgaccacaaatatttgttacaagtacatagtaacctacgagagcctactacgaccctgtgg  7621700         <----------DOF2                                      <-------GAMYB        <---------ANAC58                                     <------MYB46(1)        <---------ANAC46                                     <---------MYB46(3)        <---------ANAC58            <---------ARR14(2)       ----------->GT1    <---------ZAT2                  --------->ARR14(2)       <------MYB83 <----------DOF2    <---------At4g35610             --------->ARR11(3)       --------->MYB52(2)                     <    --------->At4g35610       --------->ZAT18                --------->MYB55(2)                  ----    --------->ZAT2           <------ZmHOX2a(1)              <---------TOE2(2)                    <--- ----ZAT14            <---------WRKY18(1)                   <---------TOE1(2)           --------->ARR11(3) --->ZAT14          <---------WOX13(1)        <---------------AtSPL3  ------->GAMYB     <---------ARR11(3) ----ZAT18       <---------YAB1    <---------CCA1(2)       <---------MYB52(1)      --------->At4g35610   actcagagctgcttgtagtaagattgactgaggacacaaatcttggaaccagtactgcctcgttggttacaacggtctttgaagtagctaaatcttctaa  7621800                        <----------DOF2           <----------DOF2                                                                   --------           ------>ZmHOX2a(1)                                                               --------->WRKY18(1)      --------->bZIP60(2)                                                           --------->ARR11(3) ---------MYB52(1)      <---------DAG2                                              <---------ARR11(3) ----->MYB46(3)   <---------MYB52(1)      <-----------GT1                       ---------->DOF2     - ---------AtMYB77 --------->ARR14(2) <---------AHL20(2)                     <---------------------WRI1   ccgttgccatgtcctttcccgtttcgctttaacctctgttttattcacttcttctacttggaatttggctaaacactcgtcgaaaagaacttggtcaatc  7621900                                                           <---------ANAC46                                           <------MYB83    <---------ANAC58      <---------ICU4                       <------MYB46(1) <---------ANAC58     <-----------GT1                    <---------ANAC58  ------->MYC3     --------->ZAT2         <-- ->WOX13(1)  ------>ZmHOX2a(1)          <---------ANAC58  <-------MYC3     --------->At4g35610 <----- -------->YAB1                          <---------ANAC46 --------->ANAC46  <---------ZAT2     -------   tcgcataatactttcctcacgtttatagtcagactttgaactgcttggttccaatgtccacgcgtgtttctctcaagagctgggaagactataggcatta  7622000  Previous    Next  AGI:  At3g21640.1    Description:  TWD1 (TWISTED DWARF 1); FK506 binding / peptidyl-prolyl cis-trans isomerase. Identical to 42 kDa peptidyl-prolyl isomerase (FKBP42) [Arabidopsis Thaliana] (GB:Q9LDC0;GB:Q8RWM0); similar to ROF1 (ROTAMASE FKBP 1), FK506 binding / calmodulin binding / peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] (TAIR:AT3G25230.1); similar to ROF1 (ROTAMASE FKBP 1) [Arabidopsis thaliana] (TAIR:AT3G25230.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40813.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, FKBP-type; (InterPro:IPR001179); Range:  from: 7618937    to: 7621484    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g21650.1    Description:  serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative. Identical to Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform (B'ZETA) [Arabidopsis Thaliana] (GB:Q9LVE2;GB:Q0WUV1); similar to serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative [Arabidopsis thaliana] (TAIR:AT3G26020.2); similar to ATB' GAMMA, poly(U) binding / protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT4G15415.2); similar to ATB' GAMMA, poly(U) binding / protein phosphatase type 2A regulator [Arabidopsis thaliana] (TAIR:AT4G15415.1); similar to unnamed protein product [Vitis Range:  from: 7621576    to: 7624083    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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