Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            --------->ZAT2                          ----------->RAV1(2)                          --------->O2                         ------>NtERF2                        <---------ALFIN1                     ------->GAMYB                    <------------AtMYB77                    --------->MYB46(3)                    <---------MYB55(2)                   --------->ZAT2                   <---------ZAT2                   --------->At4g35610                   <---------At4g35610                  ------>MYB46(1)                                       --------->ANAC58                  ------>MYB83                                       --------->ARR14(2)                  --------->MYB52(1)                                 <---------GLK1(2)                <---------MYB59                                 <-----------HVH21               --------->ANAC46                        --------->At4g35610          --------->ANAC46               --------->ANAC58                       ------->GAMYB <---------At4g35610           <--       --------->At4g35610<---------ZAT2           --------->MYB52(1)<---------ARR14(2)        ------       <---------At4g35610<---------O2             ----------->RAV1(1)  --------->ANAC58    <-------- -GLK1(2)      --------->ANAC58         --------->ANAC46        ------>ZmHOX2a(1)  ---------->DOF2<--   tatgctcccatctgcatacccaactgccacctggtttatcacacagaatcaaacaacagcaaactccttcagatactcaatagtacaaagcaccatgaat  7590500                                                      ------>MYB46(1)                                                      ------>MYB83                                       --------------->AGL15                                       <---------------AGL15  --------->AHL20(2)                  ==============================MADS_MADS                   -----  <---------AHL20(2)                  <-----------------AGL3                             --------->ANAC58 <---------YAB1           --------->ANAC46          --------------->AGL15        --------->ANAC58 -------AHL20(2)          --------->ANAC58          <---------MYB59              --------->ANAC58 ->TEIL                   --------->ANAC58        -------->P    ---------->DOF2  --------->ANAC46 -YAB1                 --------->ARR14(2)      <---------At4g35610          <----------DOF2    <----- -------YAB1           <---------ARR14(2)      --------->At4g35610   --------->ZAT18     --------->ANAC58   attattaattctagcttaaaattcaaatacgacatttctagctctatttagctaccaaatagattacaaagtgaacaactttcaagtcattaagcaaatc  7590600                            --------->STY1(2)                                         <------ZmHOX2a(1)                           --------->ANAC58                                        <------ZmHOX2a(1)      --------->MYB52(1)   ------>MYB46(1)             <---------DOF5.7(2)  --------->LBD16  --------->AHL20(2)       --------->ANAC58            --------->MYB52(1)  --------->DEAR3(1) --------->AHL20(2)        ------>MYB83            <---------TOE2(3)    <---------ALFIN1        <---- ---->YAB1         <---------------AtSPL8<------ZmHOX2a(1)------->GAMYB<---------WRKY38(1)      <---- ----ATHB12   ---------->DOF2      --------->At4g35610----------->HVH21--------->ETT(2)   <------ZmHOX2a(1)   aaaataaaaaacgaacaaaagtaagtaccaagctagaagcagaggaggctatagaggtaacggcgagagatggtccaccgcgagaggaggaaggagttag  7590700                        <-------PIF5                        ------->PIF5                       <---------ANAC58                       --------->TGA1a                       <---------ANAC58                       <---------TGA1a                    --------->ANAC58                       <---------bZIP60(2)                --------->ANAC58                       ==================================MYC_MYB                      --------->SPL7                 <------NtERF2                    <---------SPL7                  --------->LBD16                             <----                    --------->LBD16               <---------LBD16                   --------->ANAC58           <---------ALFIN1                      ------->GAMYB                      --------->ANAC58      --------->At4g35610                       --------->ANAC46                --------->YAB1  -----      <---------At4g35610                       --------->DEAR3(1)       --------->LBD16        ----- -----TOE1(3)       ----------->HVH21      --------->HSFB2a(2)           <-----------HVH21      <---- -----TOE2(3)     <---------LBD16  <---------ETT(1)--------->DEAR3(1)   --------->ANAC46       <-----   ggttttggagcagacaccttgccggacgtgccatattccgaccttctccaacgccggagcaagcacatacttccccgtcgaatcgtaagctatgttcgaa  7590800                                     <---------ARR14(2)                                     --------->ARR14(2)                                     ------->TEIL                                     <---------ARR11(1)   --------->At4g35610              <---------CCA1(2)   <---------At4g35610     <---------At4g35610                                 <--------------------- -----ARR14(2)             --------->At4g35610       --------->REM1(1)        <---------YAB1 -->TEIL                  <---------DEAR3(1)   --------->ANAC58          <------------------------ANAC81 ---->ARR14(2)           --------->ZAT18<----------DOF2                 <---------AtMYB61      <<<<<< -----ARR11(1)          <-----------HVH21      --------->ANAC58       <----------DOF2       <<<<<<<<<TBF1 ----ARR14(1)     ---------->DOF2   <---------ARR14(1)           ---------->DOF2   <-----------GT1<<<   tctacagatgaaatcacaccgaaagaggtcgctgcatcgtatctttggtaagccttcaccattctccaaaagctttggttttgattttctcttcttcttc  7590900                         <---------TOE1(3)                     <----------DOF2           <---------At4g35610                  <------NtERF2                <------NtERF2                 --------->LBD16               --------->ZAT2                  <---------AHL20(2)                <---------ANAC58               --------->At4g35610         <---------YAB1       <----------DOF2   <---------TOE2(3)     <---------ZAT2           <----------DOF2 ---ANAC81      <---------ANAC58          <---------TOE1(3)          <-----------GT1         <------- <<<TBF1        <---------ANAC46          <---------TOE2(3)   ------------>CBF --------->AHL20(2) <<<<<<TBF1    <---------LBD16       <---------MYB46(3)      >>>>>>>>>>>>>>>>>LFY<------------CBF   ttcttctagcttttgatggcgggatttagggttttagagtggttaaggcagcagggttctaacatccaatgttacttttgataaattgcgatatagtctt  7591000                               <---------DAG2                     <-----------GT1                               --------->ANAC58 ------------>CBF <---------DAG2     <-----------GT1  ------------>CBF              --------->ANAC58<-----------GT1 --ZAT6     ------------>CBF   <----------DOF2         <---------MYB52(1) <----------DOF2         <--   aaaccttttgtctattcaatatttaacccctaactttatttcaatagatttgaagcccttactcttcggacccaaacttttgttttctcaatttgcaact  7591100          <------------CBF                                                                --------->YAB1         --------->YAB1                                               --------------->AGL15         --------->ATHB12                                             <---------------AGL15         <---------ICU4                                              ----------------->AGL1         -------->ATHB1                                              ----------------->AGL3        <---------YAB1                                               ----------------->AGL2        --------->ICU4                                             <---------WRKY18(1)   <---------YAB1        <---------ATHB12                   <----------ID1         ----------->HVH21    <-----------GT1     ------------>ATHB5           --------->MYB46(3)     --------->ANAC46          --------->AHL20(2)   <---------ANAC46        --------->MYB52(1)            --------->ANAC58          <---------AHL20(2) <---------ANAC46       --------->ANAC58   ----------->GT1     <-------TEIL       --------->ICU4----- ---------RAV1(1)       --------->ANAC58 ---------->DOF2 --------->ANAC58 --------->YAB1<-----------GT1   atgttgtgtaatcattggtactaagaacgaaacagaacaaacaaaaagaaaaatggctcacgacatccatgaccaatattagtaattttttatcattttc  7591200                          <---------YAB1                        --------->YAB1                        --------->ATHB12                        <---------ICU4                       --------->ICU4                <--------ATHB1                -------->HAHB4                --------->ATHB51                                --------->TOE2(3)                <---------ICU4                               <-----------GT1                --------->ATHB12                         <----------DOF2                    <--------               --------->ICU4      ---------->DOF2       <---------DAG2                    <---------               <---------YAB1<---------YAB1      --------------->AtSPL8                <----------DOF2               <---------ATHB51 --------->At4g35610  <-------TEIL     --------->YAB1  <---------DAG2         <<<<<<<<<EIN3<---------WOX13(1)         <---------------AtSPL8          <---------ANAC58 ---->TOE2(3)--------->YAB1--------->YAB1        --------------->AtSPL3          <---------ANAC58   ttaaaaatcaatgtataataattgaatgattatcatctaaagaaaatcaagaacgtacactttttatcttattcatactctaggcttacctttttaacat  7591300                 <---------AHL20(2)             <---------AHL20(2)            <---------AHL20(2)        <---------AHL20(2)                             --------->STY1(2)       <---------AHL20(2)                            ------>ZmHOX2a(1)    <---------AHL20(2)                           <-----------GT1              <------ZmHOX2a(1)   --------->AHL20(2)                       <---------AHL20(2)               ----------->GT1    <---- --------->TOE2(3)                         --------->AHL20(2)             ---------->DOF2       <---- ---GT1<---------AHL20(1)      --------->PCF2  <---------ICU4      --------->YAB1               <---- --GT1 --------->AHL20(2) ---------->DOF2--------->TOE2(3)      <----------DOF2      ----------->GT1   ccacattaattttttttattttttttgttaaagggcccatccacattaatttttcctagctaatttctttcaaaataaaaggatatatagaaatatttgt  7591400  Previous    Next  AGI:  At3g21540.1    Description:  transducin family protein / WD-40 repeat family protein. similar to TOZ (TORMOZEMBRYO DEFECTIVE), nucleotide binding [Arabidopsis thaliana] (TAIR:AT5G16750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62998.1); similar to hypothetical protein OsI_009808 [Oryza sativa (indica cultivar-group)] (GB:EAY88575.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ59439.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain Small-subunit processome, Utp12; (InterPro:IPR007148); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain Range:  from: 7585952    to: 7590862    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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