Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------WRKY45                  <---------ZAT14                  --------->ZAT14           --------->bZIP60(1)                                                                      <           <---------bZIP60(1)  <----------DOF2                                                     <    <---------GLK1(1)     <---------WRKY12                                          --------->YAB1  -    --------->GLK1(1)     <---------WRKY38(1)                            ----------->GT1   --------->ARR11(3) --->REM1(1)     --------->AtLEC2                                  --------->AHL20(2)      <---------ARR11(3) -TEIL  ----------->HVH21--------->WRKY18(1)                       <---------AHL20(2)    ------->TEIL   tcactgaaatctgacatccctgcaatggtcaatgctttggtaaactctggtttgagagtaagagtggatttaaatgagttaaacaagaatgaagctcttc  7563200                                                                                          --------->TOE2(3)                                                                                         --------->REM1(1)                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                                  <---------ANAC58                                                                                  <---------ANAC58                            --------->LBD16                                      <-------TEIL             <---------WOX13(1)         <------ZmHOX2a(2)                      --------->LBD16        <---------WOX13(1) --------->ANAC46                                   <---------ANAC55(1)      --------->ATHB12     <---------------AGL15                              <---------ANAC58     --------->ICU4        --------------->AGL15                              <---------ANAC58     <---------YAB1       <---------LBD16  --------->At4g35610                <---------ANAC55(2) ---------ZAT2    ------>ZmHOX2a(2)    --------->ARR11(3)                     <---------ANAC46 ---------At4g35610      <---------At5g28300    --------->ANAC46           <---------ARR14(2) <------ -------->At4g35610     <-----------GT1<---------ARR11(3)                  --------->ARR14(2) -------   ttagctgatgattggattgatccattttaccgcaactagaagatcagttcaagacagaaacaaaacatttctgttcagttccgtgcatgctacattagct  7563300                                          <---------MYB59                                         ----------------->AGL1                                         <-----------------AGL3                                         ----------------->AG                             --------->ZAT18------>MYB83                             <---------ZAT18------>MYB46(1)         <----------DOF2    <------ZmHOX2a(1)  ------------------------>ANAC81          <---------ARR11(3)   ------>ZmHOX2a(1)   <----------DOF2 <-----------GT1                            ---------->DOF2 ---At4g35610 <---------TOE2(3) --------->ANAC58        ----------->GT1     <---------GLK1(2)     <-- -->At4g35610 <---------TOE1(3) --------->ANAC58   ---------->DOF2        <---------YAB1--------->ARR11(3)   gtttcctcgttcttttagggtttgtctttaggacactcaaataaccaaatttgaaaagaagaaaaaaacaagaattttgattctcaaagagacctttgta  7563400                                       <----------DOF2                                       <---------DAG2                                     ------->TEIL                                   --------->ZAT18                                   <---------ZAT14                                   <---------ZAT18          <-----------GT1                       ---                                   --------->ZAT14         <---------YAB1                   <--------                                 --------------->AtSPL8 <---------YAB1              --------------->AGL15          --------->ANAC58       <---------------AtSPL8 <---------AHL20(2)          <---------------AGL15          --------->ANAC58       <---------------AtSPL3--------->AHL20(2)           <----------DOF2 -       --------->ANAC46       ---------->DOF2          <---------AHL20(1)          <-----------------AGL2    <---------WRKY38(1)   <---------ANAC58             --------->YAB1              <-----------------AGL1 --------DOF2             <---------ANAC58           --------->ICU4                <-----------------AGL3   ctttgatcaacgaagcaaactctcatttccttgaaagtgtacttttttataagtcaatattattacaagactagcgaagagtgtttctttttttggtcac  7563500                                <---------ANAC55(2)                                <------MYB46(1)                                <---------ANAC46                                <------MYB83                               --------->MYB46(2)                               --------->MYB55(2)                               --------->MYB111(1)                               --------->MYB111(2)                               --------->MYB52(2)  <---------ARR11(1)              ------------>CBF                               <---------MYB46(3)  ------->TEIL  --------->YAB1 <------ZmHOX2a(2)                               --------->MYB59     <---------ARR14(2)          --------->ARR11(3)                              <---------MYB55(1)   --------->GLK1(2)           <---------ARR11(3)  <---------WOX13(1)         <---------MYB52(1)    --------->ARR14(2)         <------ZmHOX2a(1) ------>At5g28300         <---------TOE1(3)       <---------CCA1(2)   --------->ARR11(3)   --------->ANAC58 ---HVH21------->TEIL     <---------TOE2(3)       <---------ARR14(1) <---------CCA1(2)     --------->ANAC58 -------->ATHB12 <------ZmHOX2a(1)      <-------TEIL      ---------->DOF2<---------HSFB2a(2)        <   agtgattgatgaatttggaggaacatttatcgttaggtgagtttcatgtgtcgaatcttataaagaatcatatatctagaggatcaccaatacaagctct  7563600                           <---------ANAC46                     <------NtERF2                     <-----------RAV1(2)                    --------->LBD16                    ------>NtERF2                                                     <-------MYC3                    <------NtERF2                                                     <-------MYC4                    --------->At4g35610                                               ------->PIF5                   --------->DEAR3(1)                                                 ------->MYC3                   --------->RRTF1(2)                                                 <-------MYC2                   --------->RAP2.3(2)                                      ===================MYC_MYB                  --------->RAP2.3(1)                                       <-------GAMYB                 --------->LBD16                                           <---------ANAC58                 <---------ATERF1(1)                                       <---------ANAC58                 ------>NtERF2                                             <---------ANAC46                --------->ANAC46                                       <---------ANAC58              *TSS--------->RRTF1(1)                                   <---------ANAC58--------->ALFIN1             --------->GLK1(2)                                      ------->PIF5      ------->MYC4             <---------ARR14(2)                                     ------->PIF4      ------->MYC2             --------->ARR14(2)                                     ------->MYC4      <-------PIF5            --------->GLK1(1)                      <----------DOF2  <-------MYC2     --------->TGA1a            <---------GLK1(1)         <---------LBD16               <-------PIF5     --------->O2           <------ZmHOX2a(1)          --------->HSFB2a(2)           ------->MYC2     <---------TGA1a     <---------LBD16<---------At4g35610--------->LBD16              <-------PIF4     <---------O2     --------->SPL7----------->RAV1(1)<---------HSFB2a(2)           <-------MYC3     --------->ANAC55(2)   <---------SPL7--------->At4g35610 <---------LBD16                ------->MYC3   <---------ALFIN1 ------------------SPL14  <------ZmHOX2a(1)        ============================================bZIP_DOF   ggttttgtacggaggaatccgccgcagaggagtgtattttccgggatgggttcctttgattttaagggcatgtgcttgcgttgttccacgtgttgttctt  7563700                                    <---------MYB46(3)                                 <---------MYB46(3)                              <---------ANAC55(1)                              <---------ANAC46                              <---------ANAC58                              <---------ANAC58              <---------YAB1  <------MYB46(1)              --------->ARR11(3)    <---------MYB46(3)        <------MYB83                 <---------ARR11(3)    <-----------RAV1(1)      <---------DEAR3(1)           <---------At4g35610  --------->At4g35610        --------->MYB46(2)           --------->At4g35610  <---------At4g35610  --------->YAB1               <---------ANAC46  <---------ZAT2      <---------ATHB12           <---------YAB1                             --------- --------->GLK1(2)  --------->WOX13(1)           <---------AtMYB61                <---------GLK1(1)   gggaagctgttgcattctgaatcaatcaagttcggtgtttgttctgatgttatggtgggaagctctctgatcagtatgtatgggaaatgtggatgtgtag  7563800                                                                     <---------ARR14(2)                                                                  <------MYB46(1)                                                                  <---------ANAC46                                                                  <------MYB83                                                                 <---------MYB46(3)                                                                 --------->MYB55(2)                                                                <---------ANAC46                                                              <------MYB83                                                              <------MYB46(1)            --------->ALFIN1                                 <---------MYB46(3)     --------->ANAC46                        <---------ANAC46<---------AtMYB61     --------->ANAC58                 <-------MYC3          <---------WOX13(1)     --------->ANAC55(1)              ------->MYC3        --------->ATHB12     <---------ANAC55(2)             --------->O2        <---------YAB1         --------->YAB1     --------->ANAC58                <---------O2        --------->ICU4        --------->ICU4     --------->ANAC55(2)             --------->TGA1a--------->ANAC58 ---------->TaMYB80         <----    ------->TEIL  <---------TOE2(3)  <---------TGA1a--------->ANAC58 --------->ARR14(2)   <---------ARR14(2) >ALFIN1 --------->DAG2             <-----------------------TaNAC69(2)         <---------ATHB12 <----   tttctgcacgtaaggtgtttgacgaaatgcctgagagaaacgtggctacttggaacgctatgattggtgggtatatgagcaatggtgatgcagttttggc  7563900                                                      --------->ATHB12                                         <---------ANAC46                           --------->HSFB2a(2)       <---------YAB1                           <---------HSFB2a(2)  ------>ZmHOX2a(2)                  --------->MYB52(1)     <---------ANAC58                 <---------GLK1(1)       <---------bZIP60(2)                 --------->CCA1(2)       <---------ANAC58       --------->ALFIN1                 --------->GLK1(1)    ----------->HVH21   ---------->DOF2 -----ANAC58    <---------ARR11(3)   --------->At5g28300<---------YAB1 -----ANAC58    --------->ARR11(3)  ----------->GT1  --------->ICU4                     ---------->DOF2   tagtggattgtttgaagagatatcggtttgtagaaatacggtgacttggatcgagatgattaaagggtatgggaagagaatagagattgagaaagctaga  7564000                                                      <---------ANAC58                                                      <---------ANAC46                                                      <---------ANAC58  -------->HAHB4                                                     --------->ATHB12   <---------ICU4                                                    <---------YAB1   --------->YAB1                                           <------MYB83           --------->TOE1(3)                                        <---------ANAC58          --------->TOE2(3)          --------                          ---------->DOF2  <------MYB46(1)      <---------TOE1(3)            --------                 <----------DOF2        <---------ANAC58        <---------TOE2(3)      <------ZmHOX2a(1)   gaattgtttgagagaatgcctttcgagttaaagaatgtgaaggcttggtctgtgatgcttggagtttacgttaataatcgaaaaatggaggatgcaagga  7564100  Previous    Next  AGI:  At3g21465.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G15640.1); similar to adenyl cyclase [Nicotiana tabacum] (GB:AAB87670.1) Range:  from: 7560726    to: 7563472    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g21470.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to CRR4 (CHLORORESPIRATORY REDUCTION 4) [Arabidopsis thaliana] (TAIR:AT2G45350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO60897.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 7563614    to: 7565254    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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