Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <-----------GT1                                                                    <------NtERF2                             <---------At4g35610                   <------NtERF2                 ----------->HVH21                                 ------>NtERF2 --------->ZAT6               <---------ANAC58                                    <---------RAP2.6(3)               <---------ANAC55(2)                                --------->RAP2.3(3)               --------->ANAC46                                   --------->RAP2.6(2)               --------->ANAC55(2)                                --------->RAP2.3(2)              ------->TEIL   <---------ANAC55(2)                  --------->DEAR3(1)          <---------------AtSPL3                                  --------->ATERF1(2)          ------->TEIL       --------->ANAC55(2)                  <---------ATERF1(2)    <---------ARR14(2)       --------->At4g35610                 --------->ATERF1(1)    --------->ARR14(2)     <-----------RAV1(2)                   --------->RAP2.3(1) -------TEIL  <-------TEIL<------ZmHOX2a(2)                     --------->ATERF1(1) ------->AtLEC2<---------ANAC58      ------->TEIL               <---------ATERF1(1)              <--- ---TEIL <---------AtLEC2<-----------HVH21---------->DOF2      <---------ATERF1(1)         --------->AtLEC2   catgcatatatgcatgtacgtgacaccgatcaggtgatgaatttcaaagcccaaattgtatttggaggccgccaagtgtatttacactattacatgcaga  7527800                                                                                              <------                                                                                             <-------                  --------->TGA1a                 ------->TEIL                           ----------->GT1                  --------->O2                 --------->AtLEC2                          <---------ANAC58                  =================bZIP_DOF  <---------AtLEC2                            <---------ANAC58        <---------HSFB2a(2)                  <---------ANAC58                            <---------ANAC46     --------->ARR11(3) <----------DOF2      <---------ANAC58                     <----------DOF2 ------WOX13(1)   <---------O2         <---------YAB1                         ------>ZmHOX2a(1)   ttgatcagttcttgaaggccaagtgtctttttgtcactctcactattgcatgcacattgtcaattttctgttatagtctcctcgttttaaggcgtgatat  7527900                                                                               --------->ZAT14                                                                               --------->ZAT18                                                                               <---------ZAT14                                                 <---------AHL20(2)            <---------SPL7                                                --------->AHL20(2)           <---------------AtSPL8                                          --------->TOE2(3)                  --------------->AtSPL8                                         --------->ANAC58                    <---------------AtSPL3      --------------------->WRI1         --------->ANAC46                   <---------ANAC58   ------->MYC3       <-------MYC3       --------->ANAC58                   <---------ANAC46   ------->MYC2       ------->MYC2      --------->SPL7                      <---------ANAC58   <-------MYC2       <-------MYC2  --------------->AtSPL8            <---------TOE1(3)   <-------MYC3       ------->MYC3  <---------------AtSPL8            <---------TOE2(3) <---------TOE1(2)  <---------TOE1(2)   ------->TEIL                  <---------YAB1 ----TaMYB80  --------->ARR14(2)    <---------------AtSPL3   <---------HSFB2a(2)     --------->GLK1(2) --ARR11(3)   <---------ARR14(2)   <---------ANAC46          --------->HSFB2a(2)    <---------GLK1(2)   tcgcatgtgtttgtaatattcgcatgtgttacacattatgtgtacgtcaaataaatctcacatctggatgttaagattgagtgtacgattctgtagaagc  7528000                                                                                                -----                                                                                              <------                                                                                        <---------ANAC58                                                                                        <---------TGA1a                                                                                        =============                                                                                        <---------O2                                                                                        <---------ANAC46                                                                                        --------->O2                                                                                        <---------ANAC55(2)                                                                            --------->YAB1    -------                                                                            --------------->AGL15                                                         <---------YAB1  --------->YAB1 <---------ANAC55(1)                                                        <---------AHL20(2)  <---------------AGL15<---     --------->ARR14(2)                    <---------LBD16--------->YAB1 <---------ICU4 --------->TGA1a     --------->ARR11(3)             <-----------HVH21   --------->AHL20(2) <---------YAB1--------->TOE1(2)     <---------ARR14(2)            ----------->GT1     --------->YAB1   --------->ICU4  <---------ANAC58   acaagtggatattgagaccaagtgtttgatatttgaagggtcataagcggattagaattttaataagtggaacaattatcatatagagtaacgtgtgatc  7528100   --------->CCA1(2)   <------ZmHOX2a(2)                                                     --------->ANAC58      ------  --------->ARR11(3)                                                   <---------AtLEC2        ------  <---------ARR14(2)                                                   <---------ANAC58      --------  <---------ARR11(3)                                                <-------PIF5             --------  --------->ARR14(2)                                                ------->PIF5          *TSS ------  --------->AGP1                                                  ------->TEIL          --------->AtMYB61 ->ZmHOX2a(2)                                                  --------->ANAC58         <---------ALFIN1 ---ARR11(3)                                                   --------->ANAC58   --------->YAB1 =======bZIP_DOF                                         <---------AHL20(2)    --------->WOX13(1) -->ARR11(3)                                             ----------->TBP --------->ANAC58 --------->ANAC46 -------DOF2                                           ----------->TBP <---------ANAC58--------->ANAC46   tttagatccacaagtttgggtttgagtcagtcgctatctaaataagtctccatgtctatataaaaacgcacttgcatgcatcagtcatcaccacaccaac  7528200                                           --------->ANAC55(2)                                          <---------TOE2(2)                                          <-------TEIL                                          ------->TEIL                                          --------->SPL7                                        --------->TOE1(2)                              <---------YAB1                                        <---------SPL7                               --------->YAB1                                       <---------ANAC58  --------->TOE2(3)          --------->ICU4    <---------CCA1(2)                  <---------ANAC55(2)                 --------->ATHB12  <------- >MYB83 <----------DOF2                <---------ANAC58  --------->YAB1    --------->ATHB51  <------- -->P   <---------DAG2                 --------->ANAC55(2)                 <---------ICU4    -------- ->AtMYB61                            <-------TEIL    <----------DOF2     <---------YAB1     <------- ->MYB46(3)                           --------------->AtSPL3              --------->ICU4--------->YAB1 >MYB46(1)                            <---------------AtSPL8      <---------ZAT18   --------->AHL20(2)   tctctcatctctttttgtcaacaaaaaaaaaacacagaagtacgtacgtagcctctctttcttaatggttcacttcattatttgcatttattatagcgtt  7528300                                                        <---------YAB1                                                       <---------AHL20(2)                     <------   ----------->GT1                                <---------ARR11(3)                   ----------->GT1 --ZAT6         ---------->DOF2                   --------->AHL20(1)             <---------YAB1 --ANAC58   --------------->AGL15        <---------DAG2<---------AHL20(1)      --------->YAB1<------- --->GT1--------->REM1(1)--------->TOE2(3)<----------DOF2       <---------MYB52(1)--------->YAB1 <--- --ANAC58   <---------------AGL15    <-----------GT1 <---------AHL20(2)     --------->YAB1   --------   acaagaagttacaactacaaaaggaaaacttaattctcttcacccttttgtatatattatttttcagttatcttacaagtataatgaaaatgttataaat  7528400                                                                                        --------->ANAC58                                                                                        --------->ANAC58                                                                                        --------->RAP2.6(2)                                                                                        --------->ANAC46                                                                                        --------->RAP2.3(2)                                                                                       --------->RAP2.3(1)                                                                                      <------NtERF2                                                                                      <---------DREB2C(1)                                                                                      ------>NtERF2                                                                                      --------->ATERF1(1)                                                                                      <---------ATERF1(1)                                                                                      --------->DREB2C(1)                                                                                     <---------SPL7                                                                                     <---------RAP2.3(1)                                                                                     ------>NtERF2                                                                                     <---------ATERF1(1)                                                                                     <---------ERF1                                                                                    <---------DEAR3(1)                                                                                    <---------ATERF1(2)                                                                                    --------->ATERF1(2)                                                                                    <---------RAP2.6(2)                                                                                    <---------ANAC58                                                                 --------->ARR11(1) <---------ANAC58                                                        --------->MYB52(1)   <-------TEIL<------NtERF2                                                       ------->GAMYB        --------->CCA1(2)                                                       --------->MYB55(1)  --------->ARR14(2)      <-                                                      --------->MYB46(3)   <---------ARR14(2)      <-                                           --------->YAB1        --------->ARR11(3) <---------RRTF1(3)                                         <---------TOE2(3)       <---------ARR11(3) <---------DREB2C(2)         ----------->GT1               <---------AHL20(2)  ----------->GT1--------->At4g35610      <- ---AHL20(2)                          <---------AHL20(2)-------->P--------->CCA1(2) <---------RAP2.3(2) --AHL20(2)               <---------MYB52(1)        <-----------GT1 <---------YAB1  <---------RAP2.3(3) ------AHL20(2)          <---------RAP2.6(3) ---------->DOF2<---------MYB52(1)      <---------RRTF1(2) ->AHL20(2)      <-------TEIL   ---------->ID1 ----------->GT1 ----------->ARR10   --------->RAP2.6(3)   ttatctgaaaaatgaaaaatgcatagccgtttttgttttttttaatgaaaagtttaacaaccggtaagatatgatcagatacaatggcggccgcaacgat  7528500              --------->ANAC58              --------->ANAC58         <---------ANAC46                   <---------ANAC55(2)      ----------->HVH21                <---------At4g35610      <---------DEAR3(1)            <---------At4g35610     --------->SPL7                 <---------ZAT14 --------ANAC58                     <-------TEIL     <---------ARR11(3) --------ANAC46    ------->MYC3    --------->ALFIN1  --------->ARR11(3)                       ------- --------ANAC58    <-------MYC3 <---------------AtSPL8                             <---------LBD16  -   gtcttgggacgacgggaagcacatgaaggtgaagagggtgcagattacatatgaagatgttatcaactccatagaggctgaatacgacggagacactcat  7528600                    ------>ZmHOX2a(1)                    --------->LBD16                  ----------->RAV1(2)                --------->ANAC58                --------->ANAC58       <---------SPL7              <---------ALFIN1        <---------ANAC46             <---------ZAT18         <------NtERF2           <---------ANAC55(2)      ------>NtERF2           --------->ANAC58        <---------RAP2.3(3)                                   <-----------GT1           --------->ANAC55(2)     <---------DEAR3(1)                                    <---------AHL20(2)           --------->ANAC58       --------->RAP2.6(3)                                <---------CCA1(1)           --------->ANAC55(1)   --------->MYB52(1)                   <----------DOF2<---------RVE1(1)           --------->ANAC46 <---------GLK1(1)                         <---------DAG2<---------ARR11(3)       <-----------HVH21 --------->ANAC58                          ------>MYB46(1)  --------->ARR11(3)      --------->AtMYB61  --------->ANAC58--------->MYB52(1)        ------>MYB83     --------->AHL20(1) -->YAB1  --------->RAP2.6(3)   ----------->HVH21        ----------->GT1            <---------AHL20(1) ------>GAMYB--------->ZAT14--------->GLK1(1)    <-----------GT1 <---------MYB59---------->DOF2   ---   aaccctcaccatcacggcactcctggcaagaaatctgacggcgtaagggtttaacaatgttgtaaaacctaacttttcacataaaagatatttacatgag  7528700  Previous    Next  AGI:  At3g21371.1    Description:  unknown protein Range:  from: 7527710    to: 7527916    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g21380.1    Description:  similar to MBP1 (MYROSINASE-BINDING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G52040.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72270.1); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) Range:  from: 7528190    to: 7530683    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version