Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------ANAC58                        <---------ANAC58                      --------->ARR11(3)                                         <---------ALFIN1                    --------->HSFB2a(1)                                    ------->TEIL                    --------->HSFC1(2)                                    <---------ALFIN1                    <---------HSFB2a(1)                                  <---------ZAT14             --------->TGA1a                                             <---------ZAT18             <---------O2                                                --------->ZAT14             --------->O2                                                --------->ZAT18             <---------ANAC46<---------REM1(1)<---------ANAC58        <---------At5g28300         <--             <---------TGA1a <---------ANAC46 <---------ANAC58       <-----------GT1     <---------AHL20(2)  =====================bZIP_DOF               <---------ANAC46--------->TOE2(3)------>MYB46(1)    ---  ---------->DOF2   <---------HSFC1(2)  <---------ALFIN1      --------->TOE1(3)------>MYB83<--------- ------>DOF2 <---------bZIP60(2)     --------->PCF2 <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   --------->YAB1   aaagaaaagagacagacgtggaaatttcttggtgtagatgtcccacaggcttggacctctgcaaccttcatttactgcaccttccacctattttaaccat  7527300                                                    --------->MYB46(3)                                                   --------->ANAC58                                                   --------->ANAC58                                                   >>>>>>>>>>>>>>>>>LFY           <---------ICU4                          --------->ANAC46    <---------ANAC55(2)                      --------->At4g35610                                    <   <-------TEIL                          --------->TOE2(3)                                         <- -------AHL20(2)                      <---------GLK1(2)                <---------AHL20(2)        <--- ------>AHL20(2)<---------YAB1      <---------ARR11(3)  <---------ATHB12      <-----------GT1<------- --GT1    <---------ATHB12       ----------->RAV1(1)<---------MYB55(2) --------->AHL20(2)    <-------   ataaatacataaatcattttcattgttccatttcccaacatattcttagcttcacccaatgttttgtaagtgttttaatatcaccatttctatggatatt  7527400                                                   ------>MYB46(1)                                                   ------>MYB83                                                 <---------MYB46(2)                                                 <---------MYB59                                           <---------ANAC58                                           --------------->AtSPL3                                           <---------ANAC58                                           --------------->AtSPL8                                       <-------GAMYB                                      <---------MYB46(3)                                     <---------ANAC46             --------->LBD16                                    <------NtERF2<---------MYB111(1)                                   ------------>AtMYB77          <---------HSFB2a(2)                                  <---------RAP2.3(3)            --------->HSFB2a(2) <<<<<<<<GATA-1              ---------->DOF2     --------->MYB46(3) ----------GT1             ----------->HVH21 <---------SPL7     <---------LBD16 ------AHL20(2)         ------->TEIL<---------At4g35610 ---------->DOF2       --------->ANAC58 --CCA1(1)          --------------->AtSPL8<---------LBD16--------->DAG2       --------->ANAC58     -- --RVE1(1)        <-------TEIL    <---------DEAR3(1) --------->YAB1         <---------AtLEC2      <--   ttatctattttgtatacatatacatgtacctgaaaggctgcggttgcggtaccaaacataaagccctccggaaaacttgcacggctaagagtttcggtct  7527500                                     ------>NtERF2                                     <---------RAP2.6(3)                                    --------->RAP2.3(2)                                    --------->RAP2.6(2)                                    ----------->HVH21                                    --------->DREB2C(2)                                    <---------ETT(1)                                    --------->DEAR3(1)                                    --------->RAP2.3(3)                                   --------->DEAR3(2)                                   --------->RAP2.3(1)                                  --------->At4g35610                                  <---------At4g35610                          --------->ATHB12                                --------->GLK1(1)                             <---------YAB1                                <---------GLK1(1)                         --------->GLK1(2)                            --------->ETT(1)                -------->P    --------->ARR14(2)                            <---------ANAC46               <-----------GT1<---------KAN4(2) ------->HSFB2a(2)        <-----------HVH21           ---------->DOF2   <------ZmHOX2a(1) -------LBD16------>ZmHOX2a(1)<------NtERF2     <---------YAB1------->GAMYB --------->YAB1<---------AHL20(2)   tcgggcaaacaggtccttcttcagcccttgtcggagagccgacaagacttattagtaaaagtaaccccaagagaggaatcttcattgttgattttttttt  7527600                                                                                     <---------AHL20(2)                                                                                   <-----------TBP      ==============================bZIP_DOF                                     <---------AHL20(2)      --------->O2                                                         --------->TOE2(3)      <---------O2                                                        ----------->GT1       <----      --------->TGA1a                                                   <---------ARR11(3) --------->CCA1(2)      ==============================bZIP_DOF                            --------->ARR11(3)<---------ARR11(3)      <---------TGA1a                ---------->DOF2         ---------->DOF2    <---------AHL20(1)  < <---------At4g35610      --------->DAG2               --------->ATHB12--------->RVE1(1)  --------->ARR11(3) --------->At4g35610     ---------->DOF2 --------->ALFIN1 *TSS  ----------->GT1 --------->AHL20(1) --   ataagctcacgagtgtgtttttggtcaaaaagttcaaaacaaagtggaagactatgttgatttgaaaggagaaatatcgttatatatttatagatatata  7527700                                                                               <-----------GT1                                                                    <------NtERF2                             <---------ANAC55(2)                   <------NtERF2                 ----------->HVH21                                 ------>NtERF2 --------->ZAT6               <---------ANAC58                                    <---------RAP2.6(3)               <---------ANAC55(2)                                --------->RAP2.3(2)               <---------ANAC58                                   --------->RAP2.3(3)               --------->ANAC46                                   --------->RAP2.6(2)              <-------TEIL   <---------At4g35610                  <---------ATERF1(2)          <---------------AtSPL3                                  --------->DEAR3(1)          ------->TEIL       --------->ANAC55(2)                  --------->ATERF1(2)    <---------ARR14(2)       --------->At4g35610                 --------->RAP2.3(1)    --------->ARR14(2)     <-----------RAV1(2)                   --------->ATERF1(1) ---TEIL <---------AtLEC2<-----------HVH21---------->DOF2       <---------ATERF1(1) -------TEIL  ------->TEIL<------ZmHOX2a(2)                     --------->ATERF1(1)              <--- ------->AtLEC2--------->ANAC55(2)   ------->TEIL              <---------ATERF1(1)         --------->AtLEC2   catgcatatatgcatgtacgtgacaccgatcaggtgatgaatttcaaagcccaaattgtatttggaggccgccaagtgtatttacactattacatgcaga  7527800                                                                                              <------                                                                                             <-------                  =================bZIP_DOF       ------->TEIL                           <---------ANAC58                  <---------O2                 --------->AtLEC2                          <---------ANAC46                  --------->TGA1a            <---------ANAC58                            <---------ANAC58        <---------HSFB2a(2)                  <---------ANAC58                            ----------->GT1     --------->ARR11(3) <----------DOF2      <---------AtLEC2                     <----------DOF2 ------WOX13(1)   --------->O2         <---------YAB1                         ------>ZmHOX2a(1)   ttgatcagttcttgaaggccaagtgtctttttgtcactctcactattgcatgcacattgtcaattttctgttatagtctcctcgttttaaggcgtgatat  7527900                                                                               <---------SPL7                                                                               <---------ZAT14                                                                               --------->ZAT18                                                 <---------AHL20(2)            --------->ZAT14                                                --------->AHL20(2)           <---------------AtSPL3                                          --------->TOE2(3)                  <---------------AtSPL8                                         --------->ANAC58                    --------------->AtSPL8      --------------------->WRI1         --------->ANAC58                   <---------ANAC46   ------->MYC2       <-------MYC3       --------->ANAC46                   <---------ANAC58   <-------MYC3       <-------MYC2      ------->TEIL                        <---------ANAC58   ------->MYC3       ------->MYC2  --------------->AtSPL8            <---------TOE2(3)   <-------MYC2       ------->MYC3  <---------------AtSPL8            <---------TOE1(3) <---------TOE1(2)  <---------TOE1(2)   --------->SPL7                <---------YAB1 ----TaMYB80  <---------ARR14(2)    <---------------AtSPL3   <---------HSFB2a(2)     --------->GLK1(2) --ARR11(3)   --------->ARR14(2)   <---------ANAC46          --------->HSFB2a(2)    <---------GLK1(2)   tcgcatgtgtttgtaatattcgcatgtgttacacattatgtgtacgtcaaataaatctcacatctggatgttaagattgagtgtacgattctgtagaagc  7528000                                                                                                -----                                                                                              <------                                                                                        =============                                                                                        <---------ANAC55(1)                                                                                        <---------ANAC58                                                                                        --------->TGA1a                                                                                        <---------TGA1a                                                                                        --------->O2                                                                                        <---------ANAC46                                                                            --------------->AGL15                                                                            <---------------AGL15<---                                                         <---------YAB1  --------->YAB1 <---------O2                                                        --------->AHL20(2)  --------->YAB1    -------     --------->ARR14(2)                    <---------LBD16--------->YAB1 <---------ICU4 <---------ANAC55(2)     <---------ARR14(2)             <-----------HVH21   <---------AHL20(2) <---------YAB1--------->TOE1(2)     --------->ARR11(3)            ----------->GT1     --------->YAB1   --------->ICU4  <---------ANAC58   acaagtggatattgagaccaagtgtttgatatttgaagggtcataagcggattagaattttaataagtggaacaattatcatatagagtaacgtgtgatc  7528100   <------ZmHOX2a(2)   --------->CCA1(2)                                                     --------->ANAC58      ------  <---------ARR14(2)                                                   <---------ANAC58        ------  --------->AGP1                                                       <---------ANAC58      --------  --------->ARR14(2)                                                ------->PIF5             --------  --------->ARR11(3)                                                <-------PIF5          --------->ANAC46  <---------ARR11(3)                                              ------->TEIL          --------->AtMYB61 ->ZmHOX2a(2)                                                  --------->ANAC58         <---------ALFIN1 ---ARR11(3)                                                   --------->ANAC58   --------->YAB1 =======bZIP_DOF                                         ----------->TBP --------->ANAC58 *TSS ------ -------DOF2                                             <---------AHL20(2)    --------->WOX13(1) -->ARR11(3)                                           ----------->TBP <---------AtLEC2--------->ANAC46   tttagatccacaagtttgggtttgagtcagtcgctatctaaataagtctccatgtctatataaaaacgcacttgcatgcatcagtcatcaccacaccaac  7528200  Previous    Next  AGI:  At3g21370.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT1G66280.1); similar to BGL1 (BETA-GLUCOSIDASE HOMOLOG 1), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G52400.1); similar to ATA27 (Arabidopsis thaliana anther 27), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT1G75940.1); similar to beta-glucosidase [Brassica napus] (GB:CAA57913.1); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 7524060    to: 7527658    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g21371.1    Description:  unknown protein Range:  from: 7527710    to: 7527916    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g21380.1    Description:  similar to MBP1 (MYROSINASE-BINDING PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G52040.1); similar to jasmonate inducible protein [Brassica napus] (GB:CAA72270.1); contains InterPro domain Mannose-binding lectin (InterPro:IPR001229) Range:  from: 7528190    to: 7530683    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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