Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------At4g35610                 --------->REM1(2)          ----------->GT1                  <---------ANAC46 -------->TGA1a                          <---------ZAT2 ---------O2                             --------->ZAT2 ---------TGA1a                          <---------ZAT14 -------->ANAC55(2)                      <---------At4g35610 -------->O2                          <---------At4g35610 ---------ANAC55(2)                   ------>NtERF2 -------->ANAC46                      --------->At4g35610                <-----------RAV1(1) -------->ANAC58                <---------ANAC58                  --------->LBD16 -------->ANAC55(1)           ------>ZmHOX2a(1)                  <---------LBD16            --------- -------->ANAC58       <---------ANAC58  --------->ZAT14   --------->AtMYB61         ----------->GT1 --------TOE1(2) --------->DAG2 <---------ANAC58        --------->ARR14(2)        <---------MYB46(3) -----------DYT1---------->DOF2--------->ZAT2----------->HVH21  <---------LBD16  <---------MYB52(1) --------->TaNAC69(2)  <---------ANAC58  --------->At4g35610  <---------ALFIN1  <-------GAMYB--------   tcacgttactggaggtgataaagtagcatgtcctgcttgccgctgctgtgaaggcccaaaacctccaccgggaacttgttgccgttgttgttaaatgtta  7522400                                                                                              -------                                                                                              -------                                                                                            ---------                                                                                         <---------ANAC46                                                                <-----------ARR10      <---------ANAC46                                                                --------->ARR11(3)   --------->ZAT14  --------->At4g35610       <----------DOF2            <---------TOE2(3)       <---------REM1(1)   <-  <---------At4g35610       --------->TOE2(3)    <---------YAB1 --------->ARR14(2)   <---------ZAT14 -->GT1              --------->TOE1(1)         <-----------GT1  <---------ARR11(3)  <---------ZAT6 <- ->TOE2(3)          ------>ZmHOX2a(1)       <---------ICU4 <-------TEIL  <-----------RAV1(1)<--------   attaagctcaaaaatcaacttcctcgtaaactttagttaagcctcttaattactattagggttcaatatctacttatgttgttgtagtgttgtgtattcg  7522500            ------>MYB83       <---------WRKY18(1)    <---------ANAC58     <---------ANAC58                    <----------DOF2    <---------ANAC58    --------->STY1(2)               <------MYB46(1)                       ------- -------->AtSPL8        <---------STY1(2)               <------MYB83                   <----------DOF2 -------->AtSPL3    --------->ALFIN1                   --------->ALFIN1           --------->KAN4(2) >ARR14(2)  ------>MYB46(1)                            <---------AtMYB61         <----------TaMYB80 --------ANAC58     <---------REM1(1)          <---------MYB46(3)                <---------KAN4(1) --------ANAC58 ---------->DOF2--------->At4g35610   <------ZmHOX2a(1)          ---------->TaMYB80 -ARR14(2)<---------MYB59<---------ANAC58     <---------MYB52(1)    ---------->DOF2<-----------GT1   tacttgtcttgaccaaataaaagtgtagctagccgcttaaatccatccgttgttaggatggtgctttggccaaagtgattcgaatataccttttatacac  7522600                                                --------->AHL20(2)                                                <---------AHL20(2)                                      --------->ATHB12                                     --------->AHL20(2)                                     <---------AHL20(2)                                     <---------YAB1                             <-----------GT1  <----------DOF2      <---------AtLEC2                          <---------ZAT6<---------WOX13(1)       --------->AtLEC2         --------->YAB1 <-------TEIL   <---------ANAC46  <----------DOF2        --------->ANAC46--------->AHL20(2)        -- -->ANAC46  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <---------ICU4<-------TEIL           <---------YAB1   aaatacatgtttagaatgatgtgttattgtgttacacttttaattggtctttaattttcacacaaacatgcatgaataaatattctaacatatcatagag  7522700                                                                                              <------                                              <---------ICU4                       <---------YAB1                   <---------AHL20(2)         --------->YAB1                       --------->ICU4              ------------>CBF    --------->At5g28300  ----------->GT1   --------->TOE1(3)    <------      --------->ANAC46       <-------TEIL--------->AHL20(2)              --------->YAB1       <------    <---------ALFIN1      <---------MYB46(3)--------->ARR11(3)           --------->TOE2(3)  <-------- ------->ALFIN1   <-----------TBP----------->GT1<---------YAB1         -------->P<---------ICU4 -----   agtgttccacatcaaaaccaatttatagtggttcatggtaaaaaaaaatcatgagtctggtataaaaaaaacttaccataacatcatgagtatgttgtgt  7522800                                                                                    <------MYB83                                                                                    <------MYB46(1)                                                                                    <---------MYB46(3)                                                                                <---------MYB46(3)                                                                                <-----------RAV1(1)                                                                             <-----------RAV1(1)                                          --------->AHL20(2)              <---------ARR14(2)                                          --------->AHL20(1)              --------->ARR14(2)     --------->bZIP60(1)                  <---------AHL20(2)             <------NtERF2     <---------bZIP60(1)                 --------->AHL20(2)             --------->LBD16 ---ANAC46                               <---------AHL20(2)            <---------ANAC58 ---ANAC58                    <---------TOE2(3)                        <---------ANAC58 ---ANAC58*TSS                <---------YAB1                           <---------ANAC46  --------->ARR14(2) -ANAC46 ---------->DOF2    --------------->AGL15                     <---------LBD16    <---------ARR14(2) ------>HVH21    ----------->GT1   ----------->GT1              --------->AHL20(2) <---------AtMYB61   gatagtgacatcaaagagattgtgaaaatactaagattagaaaataatttgagaaaacatcagaaaaaaaatggcggaactgttgttggtggaaactcca  7522900                                              <-----------GT1                                           --------->bZIP60(1)                                           --------->TGA2(1)                                           <---------bZIP60(1)                                       <------NtERF2                                       --------->At5g28300                                    <---------ABI4(1)                                    <------NtERF2--------->DEAR3(1)                                   --------->LBD16                                   ------>NtERF2 --------->AtMYB61                    --------->GLK1(2)<---------DEAR3(1)  <---------At4g35610                    --------->ARR14(2)<---------MYB46(3) --------->At4g35610          --------->ANAC58        --------->ANAC46  --------->DEAR3(1)          --------->ANAC58        <---------LBD16<---------ALFIN1        ---------->DOF2  --------->ANAC46  <---------TGA2(1) <---------ALFIN1   <---------ARR14(2)----------->GT1 <---------MYB52(1) ----------->RAV1(1)------->TEIL <---------LBD16--------->MYB46(3)        ------>ZmHOX2a(1)      ----   atcccacagcaaaagcactacgaatccaaaccattcccggcggtgatatcaccaccgtctgcttcgattccaattcctgctctgtctctcccactattca  7523000                                                     --------->ZAT14                                                     <---------ZAT14                                                     <---------ZAT2                     --------->DEAR3(1)                                                     --------->ZAT2                    <-------------                                                  --------->LBD16                     <---------At4g35610                                              ------->TEIL                            --------->LBD16                                              --------->GLK1(2)                       ------>NtERF2                                              --------->ARR14(2)                    <---------LBD16                                              <---------ARR14(2)                 --------->GLK1(1)                                           --------->ANAC46                      <---------GLK1(1)                                           --------->ANAC58                 ----------->GT1       --------->YAB1         <---------GLK1(2) <---------LBD16             --------->LBD16 --------- ----->ANAC46       --------->ZAT6         --------->ANAC58               <---------LBD16  <---------ATHB12   ctcaaactatcaaaactcagaaacactatctcgattctctcttgcacgaatccggagcagtgctattcagaggttttccggtgaattccgccgatgattt  7523100                                                  <------NtERF2                                                  --------->ATERF1(1)                                                 --------->At4g35610                                                <---------DEAR3(1)                                               --------->ATERF1(1)                                               <------NtERF2                                              <---------DEAR4(2)                                              <---------ATERF1(1)                                              <---------RAP2.3(1)                                             <---------DEAR3(1)                                            <------NtERF2                                            --------->ATERF1(1)                                          <---------DEAR3(1)                                        <-----------HVH21                                       ===========================================MYC_MYB                                       <---------TGA1a                                       <---------ANAC58                     <---------ANAC58                                       <---------ANAC58                     <---------ANAC58                                       --------->O2                       <-----------HVH21                                       <---------O2                      <---------DEAR3(2)       <-------GAMYB                   --------->TGA1a                   <---------MYB46(3)       ==========================================MYC_MYB                <---------DEAR3(1)   <---------O2                       --------->SPL7<---------At4g35610<------NtERF2   --------->O2                     ------>ZmHOX2a(1)                --------->O2   <---------bZIP60(1)             <---------ANAC58 <---------ZAT2<---------ANAC58 <---------ZAT14   --------->bZIP60(1)             <---------ANAC58<---------ATERF1(1)<-----------HVH21 ================================================MYC_MYB          <---------ANAC58 --------->ZAT14 ------->GAMYB                --------->At4g35610<---------At4g35610 <---------O2  <---------REM1(2) --------WRI1  ==================================bZIP_DOF------>ZmHOX2a(1)<-------GAMYB         ----- >ATHB12       <----------DOF2<---------At4g35610<---------DEAR4(2)  <---------DEAR3(1)      <-------   caacgacgtcgttgaagctttcggtttcgatgagcttccttacgtcggaggcgctgctcctcgcactagcgtcgtcggtcgtgtcttcactgctaatgaa  7523200                --------->GLK1(2)               <---------ARR14(2)               <---------GLK1(2)               --------->KAN4(2)              --------->HSFB2a(1)              <---------HSFC1(2)     ------>ZmHOX2a(1)       --------->ANAC46              --------->ARR14(2)   ----------->RAV1(2)  <-----------GT1                    <---------ARR14(2)  ------>ZmHOX2a(1) <----------DOF2               --------->YAB1 -->TEIL      <---------HSFB2a(1)             --------->ICU4--------->CCA1(2)                -------- --ATHB12     --------->HSFC1(2)       <-----------RAV1(2) <---------GLK1(2)          <-----------GT1   tctcctcctgatcagaagattccttttcaccacgagatggctcaggtattgatcaaaatcagatttgggtttatgtgaatttgattttttacatctaaag  7523300  Previous    Next  AGI:  At3g21360.1    Description:  oxidoreductase. Identical to Clavaminate synthase-like protein At3g21360 [Arabidopsis Thaliana] (GB:Q9LIG0); similar to unnamed protein product [Vitis vinifera] (GB:CAO45814.1); contains InterPro domain Taurine catabolism dioxygenase TauD/TfdA; (InterPro:IPR003819) Range:  from: 7522810    to: 7524586    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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